RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 CKLFQ9UBR5 152 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 CYSLTR1Q9Y271 337 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 DNAH17Q9UFH2 4485 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 PKD1P98161 4303 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 FAT2Q9NYQ8 4349 aa1.49□□□□□ -2.17
SCFD1-210ENST00000553693 DNAH2Q9P225 4427 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 TRAV7A0A075B6U4 112 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 TRAPPC13A5PLN9 417 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 ARRDC5A6NEK1 342 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 C5orf58C9J3I9 102 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 LY6LH3BQJ8 138 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 TCL1BO95988 128 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 IFNA7P01567 189 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 PIPP12273 146 aaPredicted RBP1.48□□□□□ -2.17
SCFD1-210ENST00000553693 G0S2P27469 103 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 INSL3P51460 131 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 FXYD2P54710 66 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 NCALDP61601 193 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 HSPE1P61604 102 aaKnown RBP1.48□□□□□ -2.17
SCFD1-210ENST00000553693 CDK6Q00534 326 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 RHEBQ15382 184 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 C12orf74Q32Q52 190 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 CCDC153Q494R4 210 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 SCGB2B2Q4G0G5 96 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 KHDC3LQ587J8 217 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 GLYATL3Q5SZD4 288 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 Q6Q795 121 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 MIR17HGQ75NE6 70 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 CLVS1Q8IUQ0 354 aaPredicted RBP1.48□□□□□ -2.17
SCFD1-210ENST00000553693 IFT20Q8IY31 132 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 C4orf33Q8N1A6 199 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 HIST3H2BBQ8N257 126 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 GPR146Q96CH1 333 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 Q96M85 177 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 GPER1Q99527 375 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 CHST6Q9GZX3 395 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 RNASE7Q9H1E1 156 aaKnown RBP1.48□□□□□ -2.17
SCFD1-210ENST00000553693 RERGLQ9H628 205 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 SSR3Q9UNL2 185 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 NOP16Q9Y3C1 178 aaKnown RBP1.48□□□□□ -2.17
SCFD1-210ENST00000553693 LHFPL6Q9Y693 200 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 MUC4Q99102 2169 aa1.48□□□□□ -2.17
SCFD1-210ENST00000553693 TRAV27A0A087WT01 109 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 MEIKINA0A087WXM9 373 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 A0A0D9SG52 128 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 PRORSD1PA6NEY8 169 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 C1orf196B1AJZ1 125 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 SDCBPO00560 298 aaPredicted RBP1.47□□□□□ -2.17
SCFD1-210ENST00000553693 OVOL1O14753 267 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 CYB5BO43169 146 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 ORC5O43913 435 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 S1PR2O95136 353 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 APOA2P02652 100 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 SHBGP04278 402 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 TRGC1P0CF51 173 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 GNG10P50151 68 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 EIF5AP63241 154 aaKnown RBP1.47□□□□□ -2.17
SCFD1-210ENST00000553693 TNFRSF9Q07011 255 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 MINOS1Q5TGZ0 78 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 LINC00322Q6ZN03 302 aaPredicted RBP1.47□□□□□ -2.17
SCFD1-210ENST00000553693 Q6ZTI0 123 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 STX19Q8N4C7 294 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 C5orf56Q8N8D9 126 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 OR13D1Q8NGV5 346 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 NEK7Q8TDX7 302 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 C4orf3Q8WVX3 66 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 PRRT1Q99946 306 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 Q9BRP9 147 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 ZNF471Q9BX82 626 aaPredicted RBP1.47□□□□□ -2.17
SCFD1-210ENST00000553693 IMUPQ9GZP8 106 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 VCX3BQ9H321 246 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 OSTCQ9NRP0 149 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 ERGIC3Q9Y282 383 aa1.47□□□□□ -2.17
SCFD1-210ENST00000553693 RBM7Q9Y580 266 aaKnown RBP1.47□□□□□ -2.17
SCFD1-210ENST00000553693 TMSB15BA0A087X1C1 80 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 MUC21A0A0G2JKD1 596 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 TRBV10-2A0A0K0K1G8 114 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 MUC21A0A140T8X8 626 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 NUPR2A6NF83 97 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 H3BRN7 92 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 M0QZK8 103 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 M0R135 149 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 CDC42EP2O14613 210 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 ZNF682O95780 498 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 CD14P08571 375 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 GPX2P18283 190 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 BRS3P32247 399 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 RPS27P42677 84 aaKnown RBP1.46□□□□□ -2.18
SCFD1-210ENST00000553693 POLR2JP52435 117 aaKnown RBP1.46□□□□□ -2.18
SCFD1-210ENST00000553693 TAS2R41P59536 307 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 DEFA3P59666 94 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 SLC38A11Q08AI6 406 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 BCL2L15Q5TBC7 163 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 SMIM15Q7Z3B0 74 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 C10orf126Q8N4M7 172 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 MYOZ3Q8TDC0 251 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 AQP3Q92482 292 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 SPTSSAQ969W0 71 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 TMEM133Q9H2Q1 129 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 NHP2Q9NX24 153 aaKnown RBP1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms