RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 GNG5P63218 68 aa8.54□□□□□ -1.04
PRPF39-204ENST00000553605 IGLV10-54A0A075B6I4 117 aa8.53□□□□□ -1.04
PRPF39-204ENST00000553605 IGKV2-24A0A0C4DH68 120 aa8.53□□□□□ -1.04
PRPF39-204ENST00000553605 PTTG1O95997 202 aa8.53□□□□□ -1.04
PRPF39-204ENST00000553605 KHDC3LQ587J8 217 aa8.53□□□□□ -1.04
PRPF39-204ENST00000553605 IGKV3D-20A0A0C4DH25 116 aa8.52□□□□□ -1.05
PRPF39-204ENST00000553605 NDUFS6O75380 124 aaKnown RBP8.52□□□□□ -1.05
PRPF39-204ENST00000553605 TAS2R45P59539 299 aa8.52□□□□□ -1.05
PRPF39-204ENST00000553605 SMUG1Q53HV7 270 aa8.52□□□□□ -1.05
PRPF39-204ENST00000553605 Q6ZRP5 223 aa8.52□□□□□ -1.05
PRPF39-204ENST00000553605 PRSS3P2Q8NHM4 247 aa8.52□□□□□ -1.05
PRPF39-204ENST00000553605 KCNIP2Q9NS61 270 aa8.52□□□□□ -1.05
PRPF39-204ENST00000553605 IFNA7P01567 189 aa8.51□□□□□ -1.05
PRPF39-204ENST00000553605 RBX1P62877 108 aa8.51□□□□□ -1.05
PRPF39-204ENST00000553605 NHLH2Q02577 135 aa8.51□□□□□ -1.05
PRPF39-204ENST00000553605 ZFP69Q49AA0 526 aa8.51□□□□□ -1.05
PRPF39-204ENST00000553605 ZNF664Q8N3J9 261 aa8.51□□□□□ -1.05
PRPF39-204ENST00000553605 IL36BQ9NZH7 164 aa8.51□□□□□ -1.05
PRPF39-204ENST00000553605 TRAV26-2A0A0B4J265 109 aa8.5□□□□□ -1.05
PRPF39-204ENST00000553605 NAP1L6A6NFF2 107 aa8.5□□□□□ -1.05
PRPF39-204ENST00000553605 EIF3GO75821 320 aaKnown RBP eCLIP8.5□□□□□ -1.05
PRPF39-204ENST00000553605 PRR4Q16378 134 aa8.5□□□□□ -1.05
PRPF39-204ENST00000553605 OR10G8Q8NGN5 311 aa8.5□□□□□ -1.05
PRPF39-204ENST00000553605 OR5C1Q8NGR4 320 aa8.5□□□□□ -1.05
PRPF39-204ENST00000553605 SFRP2Q96HF1 295 aa8.5□□□□□ -1.05
PRPF39-204ENST00000553605 MRPS26Q9BYN8 205 aaKnown RBP8.5□□□□□ -1.05
PRPF39-204ENST00000553605 WDR61Q9GZS3 305 aaKnown RBP8.5□□□□□ -1.05
PRPF39-204ENST00000553605 PSORS1C2Q9UIG4 136 aa8.5□□□□□ -1.05
PRPF39-204ENST00000553605 PSG8Q9UQ74 426 aa8.5□□□□□ -1.05
PRPF39-204ENST00000553605 V9GYH0 126 aa8.5□□□□□ -1.05
PRPF39-204ENST00000553605 SERTM2A0A1B0GWG4 89 aa8.49□□□□□ -1.05
PRPF39-204ENST00000553605 C17orf112F2Z3M2 114 aa8.49□□□□□ -1.05
PRPF39-204ENST00000553605 RPS10P46783 165 aaKnown RBP8.49□□□□□ -1.05
PRPF39-204ENST00000553605 REG3AQ06141 175 aa8.49□□□□□ -1.05
PRPF39-204ENST00000553605 OR11H4Q8NGC9 324 aa8.49□□□□□ -1.05
PRPF39-204ENST00000553605 TRAV8-4A0A0B4J246 113 aa8.48□□□□□ -1.05
PRPF39-204ENST00000553605 H3BVH4 76 aa8.48□□□□□ -1.05
PRPF39-204ENST00000553605 LCE2BO14633 110 aa8.48□□□□□ -1.05
PRPF39-204ENST00000553605 P01737 135 aa8.48□□□□□ -1.05
PRPF39-204ENST00000553605 GAGE6Q13070 117 aa8.48□□□□□ -1.05
PRPF39-204ENST00000553605 RAB32Q13637 225 aa8.48□□□□□ -1.05
PRPF39-204ENST00000553605 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.48□□□□□ -1.05
PRPF39-204ENST00000553605 K7EQM0 130 aa8.47□□□□□ -1.05
PRPF39-204ENST00000553605 TCRAP04437 139 aa8.47□□□□□ -1.05
PRPF39-204ENST00000553605 ARMS2P0C7Q2 107 aa8.47□□□□□ -1.05
PRPF39-204ENST00000553605 GZMBP10144 247 aa8.47□□□□□ -1.05
PRPF39-204ENST00000553605 RAB5CP51148 216 aa8.47□□□□□ -1.05
PRPF39-204ENST00000553605 NTM-AS1Q6ZSK4 140 aa8.47□□□□□ -1.05
PRPF39-204ENST00000553605 PRNTQ86SH4 94 aa8.47□□□□□ -1.05
PRPF39-204ENST00000553605 CRCT1Q9UGL9 99 aa8.47□□□□□ -1.05
PRPF39-204ENST00000553605 CACNG7P62955 275 aa8.46□□□□□ -1.06
PRPF39-204ENST00000553605 FLI1Q01543 452 aaPredicted RBP8.46□□□□□ -1.06
PRPF39-204ENST00000553605 IL15RAQ13261 267 aa8.46□□□□□ -1.06
PRPF39-204ENST00000553605 NEXN-AS1Q8NBZ9 246 aa8.46□□□□□ -1.06
PRPF39-204ENST00000553605 A0A096LNI7 61 aa8.45□□□□□ -1.06
PRPF39-204ENST00000553605 FABP5P3A8MUU1 101 aa8.45□□□□□ -1.06
PRPF39-204ENST00000553605 B4DEV8 164 aa8.45□□□□□ -1.06
PRPF39-204ENST00000553605 TMEM97Q5BJF2 176 aa8.45□□□□□ -1.06
PRPF39-204ENST00000553605 SAPCD1Q5SSQ6 148 aa8.45□□□□□ -1.06
PRPF39-204ENST00000553605 PQLC2Q6ZP29 291 aa8.45□□□□□ -1.06
PRPF39-204ENST00000553605 PRR26Q8N8Z3 221 aa8.45□□□□□ -1.06
PRPF39-204ENST00000553605 PHLDA3Q9Y5J5 127 aa8.45□□□□□ -1.06
PRPF39-204ENST00000553605 M0R381 172 aa8.44□□□□□ -1.06
PRPF39-204ENST00000553605 DNLZQ5SXM8 178 aa8.44□□□□□ -1.06
PRPF39-204ENST00000553605 C15orf56Q8N910 161 aa8.44□□□□□ -1.06
PRPF39-204ENST00000553605 C5orf17Q8NAS9 161 aa8.44□□□□□ -1.06
PRPF39-204ENST00000553605 LINC00474Q9P2X8 69 aa8.44□□□□□ -1.06
PRPF39-204ENST00000553605 H3BMQ9 156 aa8.43□□□□□ -1.06
PRPF39-204ENST00000553605 BTCP35070 178 aa8.43□□□□□ -1.06
PRPF39-204ENST00000553605 RAB4BP61018 213 aa8.43□□□□□ -1.06
PRPF39-204ENST00000553605 CFAP161Q6P656 301 aa8.43□□□□□ -1.06
PRPF39-204ENST00000553605 DERL1Q9BUN8 251 aa8.43□□□□□ -1.06
PRPF39-204ENST00000553605 FSIP2Q5CZC0 6907 aa8.43□□□□□ -1.06
PRPF39-204ENST00000553605 TRBV25-1A0A075B6N4 114 aa8.42□□□□□ -1.06
PRPF39-204ENST00000553605 A0A1W2PPV4 95 aa8.42□□□□□ -1.06
PRPF39-204ENST00000553605 GRIFINA4D1Z8 144 aa8.42□□□□□ -1.06
PRPF39-204ENST00000553605 KRBOX1C9JBD0 128 aa8.42□□□□□ -1.06
PRPF39-204ENST00000553605 TPT1P13693 172 aaKnown RBP8.42□□□□□ -1.06
PRPF39-204ENST00000553605 TMBIM6P55061 237 aa8.42□□□□□ -1.06
PRPF39-204ENST00000553605 CNPY1Q3B7I2 92 aa8.42□□□□□ -1.06
PRPF39-204ENST00000553605 C20orf203Q8NBC4 194 aa8.42□□□□□ -1.06
PRPF39-204ENST00000553605 TRBV6-1A0A0K0K1D8 114 aa8.41□□□□□ -1.06
PRPF39-204ENST00000553605 CENPXA8MT69 81 aa8.41□□□□□ -1.06
PRPF39-204ENST00000553605 HIGD2BQ4VC39 106 aa8.41□□□□□ -1.06
PRPF39-204ENST00000553605 TRIQKQ629K1 86 aa8.41□□□□□ -1.06
PRPF39-204ENST00000553605 PRR27Q6MZM9 219 aa8.41□□□□□ -1.06
PRPF39-204ENST00000553605 ZFP82Q8N141 532 aa8.41□□□□□ -1.06
PRPF39-204ENST00000553605 M0R036 132 aa8.4□□□□□ -1.06
PRPF39-204ENST00000553605 HMGB3O15347 200 aaKnown RBP8.4□□□□□ -1.06
PRPF39-204ENST00000553605 S100A5P33763 92 aa8.4□□□□□ -1.06
PRPF39-204ENST00000553605 ZNF56Q15929 161 aa8.4□□□□□ -1.06
PRPF39-204ENST00000553605 SEC22CQ9BRL7 303 aa8.4□□□□□ -1.06
PRPF39-204ENST00000553605 GFRA4Q9GZZ7 299 aa8.4□□□□□ -1.06
PRPF39-204ENST00000553605 EPDR1Q9UM22 224 aa8.4□□□□□ -1.06
PRPF39-204ENST00000553605 IGLV4-60A0A075B6I1 120 aa8.39□□□□□ -1.07
PRPF39-204ENST00000553605 SUMO1P63165 101 aaKnown RBP8.39□□□□□ -1.07
PRPF39-204ENST00000553605 IQCJQ1A5X6 159 aa8.39□□□□□ -1.07
PRPF39-204ENST00000553605 IGHV1-24A0A0C4DH33 117 aa8.38□□□□□ -1.07
PRPF39-204ENST00000553605 A0A1B0GUV1 79 aa8.38□□□□□ -1.07
PRPF39-204ENST00000553605 GAGE12HA6NDE8 117 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms