RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 AKR1C3P42330 323 aa8.51□□□□□ -1.05
LINC00643-202ENST00000553426 COX8CQ7Z4L0 72 aa8.51□□□□□ -1.05
LINC00643-202ENST00000553426 RMI2Q96E14 147 aa8.51□□□□□ -1.05
LINC00643-202ENST00000553426 SAMD10Q9BYL1 202 aa8.51□□□□□ -1.05
LINC00643-202ENST00000553426 JPT2Q9H910 190 aa8.51□□□□□ -1.05
LINC00643-202ENST00000553426 TRBV6-1A0A0K0K1D8 114 aa8.5□□□□□ -1.05
LINC00643-202ENST00000553426 M0R381 172 aa8.5□□□□□ -1.05
LINC00643-202ENST00000553426 LTAP01374 205 aa8.5□□□□□ -1.05
LINC00643-202ENST00000553426 LINC00694P0DN24 101 aa8.5□□□□□ -1.05
LINC00643-202ENST00000553426 CRIP1P50238 77 aa8.5□□□□□ -1.05
LINC00643-202ENST00000553426 ZNF674Q2M3X9 581 aa8.5□□□□□ -1.05
LINC00643-202ENST00000553426 UFSP1Q6NVU6 142 aa8.5□□□□□ -1.05
LINC00643-202ENST00000553426 ZFP82Q8N141 532 aa8.5□□□□□ -1.05
LINC00643-202ENST00000553426 C14orf178Q8N769 122 aaPredicted RBP8.5□□□□□ -1.05
LINC00643-202ENST00000553426 A0A087WWL8 130 aa8.49□□□□□ -1.05
LINC00643-202ENST00000553426 TMSB15BA0A087X1C1 80 aa8.49□□□□□ -1.05
LINC00643-202ENST00000553426 S100A9P06702 114 aaKnown RBP8.49□□□□□ -1.05
LINC00643-202ENST00000553426 LINC01559Q495D7 138 aa8.49□□□□□ -1.05
LINC00643-202ENST00000553426 DAZ4Q86SG3 579 aaKnown RBP8.49□□□□□ -1.05
LINC00643-202ENST00000553426 SFRP2Q96HF1 295 aa8.49□□□□□ -1.05
LINC00643-202ENST00000553426 DAZ3Q9NR90 486 aaKnown RBP8.49□□□□□ -1.05
LINC00643-202ENST00000553426 CYTL1Q9NRR1 136 aa8.49□□□□□ -1.05
LINC00643-202ENST00000553426 A0A087WX48 190 aa8.48□□□□□ -1.05
LINC00643-202ENST00000553426 TRBV10-1A0A0K0K1A3 114 aa8.48□□□□□ -1.05
LINC00643-202ENST00000553426 UMAD1C9J7I0 102 aa8.48□□□□□ -1.05
LINC00643-202ENST00000553426 PFDN1O60925 122 aa8.48□□□□□ -1.05
LINC00643-202ENST00000553426 C1QBP02746 253 aa8.48□□□□□ -1.05
LINC00643-202ENST00000553426 RPL36AP83881 106 aaKnown RBP8.48□□□□□ -1.05
LINC00643-202ENST00000553426 ELOBQ15370 118 aa8.48□□□□□ -1.05
LINC00643-202ENST00000553426 Q8N3U1 123 aa8.48□□□□□ -1.05
LINC00643-202ENST00000553426 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.48□□□□□ -1.05
LINC00643-202ENST00000553426 SFT2D1Q8WV19 159 aa8.48□□□□□ -1.05
LINC00643-202ENST00000553426 RPL36ALQ969Q0 106 aaKnown RBP8.48□□□□□ -1.05
LINC00643-202ENST00000553426 G3V3Q6 166 aa8.47□□□□□ -1.05
LINC00643-202ENST00000553426 PAGE4O60829 102 aa8.47□□□□□ -1.05
LINC00643-202ENST00000553426 ZNF345Q14585 488 aa8.47□□□□□ -1.05
LINC00643-202ENST00000553426 Q9UF83 564 aa8.47□□□□□ -1.05
LINC00643-202ENST00000553426 TRBV7-3A0A075B6L6 115 aa8.46□□□□□ -1.06
LINC00643-202ENST00000553426 IGKV2D-24A0A075B6R9 120 aa8.46□□□□□ -1.06
LINC00643-202ENST00000553426 KANTRA0A1W2PQU2 76 aa8.46□□□□□ -1.06
LINC00643-202ENST00000553426 NIT1Q86X76 327 aa8.46□□□□□ -1.06
LINC00643-202ENST00000553426 KCNRGQ8N5I3 272 aa8.46□□□□□ -1.06
LINC00643-202ENST00000553426 FAM213BQ8TBF2 198 aa8.46□□□□□ -1.06
LINC00643-202ENST00000553426 CHCHD7Q9BUK0 85 aa8.46□□□□□ -1.06
LINC00643-202ENST00000553426 SRRM2Q9UQ35 2752 aaKnown RBP8.46□□□□□ -1.06
LINC00643-202ENST00000553426 A0A0D9SG52 128 aa8.45□□□□□ -1.06
LINC00643-202ENST00000553426 LECT2O14960 151 aa8.45□□□□□ -1.06
LINC00643-202ENST00000553426 EIF5AP63241 154 aaKnown RBP8.45□□□□□ -1.06
LINC00643-202ENST00000553426 HAMPP81172 84 aa8.45□□□□□ -1.06
LINC00643-202ENST00000553426 BAGE2Q86Y30 109 aa8.45□□□□□ -1.06
LINC00643-202ENST00000553426 Q8N976 141 aa8.45□□□□□ -1.06
LINC00643-202ENST00000553426 ZNF471Q9BX82 626 aaPredicted RBP8.45□□□□□ -1.06
LINC00643-202ENST00000553426 KLK12Q9UKR0 248 aa8.45□□□□□ -1.06
LINC00643-202ENST00000553426 DMBT1Q9UGM3 2413 aaPredicted RBP8.45□□□□□ -1.06
LINC00643-202ENST00000553426 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.44□□□□□ -1.06
LINC00643-202ENST00000553426 A0A1B0GV50 99 aa8.44□□□□□ -1.06
LINC00643-202ENST00000553426 HMSDA8MTL9 139 aa8.44□□□□□ -1.06
LINC00643-202ENST00000553426 TMEM262E9PQX1 116 aa8.44□□□□□ -1.06
LINC00643-202ENST00000553426 SMLR1H3BR10 107 aa8.44□□□□□ -1.06
LINC00643-202ENST00000553426 H2AFB1P0C5Y9 115 aa8.44□□□□□ -1.06
LINC00643-202ENST00000553426 RAB4BP61018 213 aa8.44□□□□□ -1.06
LINC00643-202ENST00000553426 Q0VG73 95 aa8.44□□□□□ -1.06
LINC00643-202ENST00000553426 ZNF56Q15929 161 aa8.44□□□□□ -1.06
LINC00643-202ENST00000553426 MBD3L1Q8WWY6 194 aa8.44□□□□□ -1.06
LINC00643-202ENST00000553426 BAALCQ8WXS3 180 aa8.44□□□□□ -1.06
LINC00643-202ENST00000553426 UBE2WQ96B02 151 aa8.44□□□□□ -1.06
LINC00643-202ENST00000553426 RBFOX3A6NFN3 312 aa8.43□□□□□ -1.06
LINC00643-202ENST00000553426 CXCL1P09341 107 aa8.43□□□□□ -1.06
LINC00643-202ENST00000553426 UBE2D3P61077 147 aa8.43□□□□□ -1.06
LINC00643-202ENST00000553426 PKIAP61925 76 aa8.43□□□□□ -1.06
LINC00643-202ENST00000553426 UBE2D2P62837 147 aa8.43□□□□□ -1.06
LINC00643-202ENST00000553426 WFDC2Q14508 124 aa8.43□□□□□ -1.06
LINC00643-202ENST00000553426 SPANXN1Q5VSR9 72 aa8.43□□□□□ -1.06
LINC00643-202ENST00000553426 FAM30AQ9NZY2 134 aa8.43□□□□□ -1.06
LINC00643-202ENST00000553426 DNAH8Q96JB1 4490 aa8.42□□□□□ -1.06
LINC00643-202ENST00000553426 SCO2A0A1W2PP80 73 aa8.42□□□□□ -1.06
LINC00643-202ENST00000553426 F5H697 171 aa8.42□□□□□ -1.06
LINC00643-202ENST00000553426 BCL2L11O43521 198 aa8.42□□□□□ -1.06
LINC00643-202ENST00000553426 CRPP02741 224 aa8.42□□□□□ -1.06
LINC00643-202ENST00000553426 PLA2G1BP04054 148 aaKnown RBP8.42□□□□□ -1.06
LINC00643-202ENST00000553426 SMIM17P0DL12 118 aa8.42□□□□□ -1.06
LINC00643-202ENST00000553426 PRR27Q6MZM9 219 aa8.42□□□□□ -1.06
LINC00643-202ENST00000553426 OR10G8Q8NGN5 311 aa8.42□□□□□ -1.06
LINC00643-202ENST00000553426 TRBV6-8A0A0A6YYG3 113 aa8.41□□□□□ -1.06
LINC00643-202ENST00000553426 OR5AL1P0C617 328 aa8.41□□□□□ -1.06
LINC00643-202ENST00000553426 RPL19P84098 196 aaKnown RBP8.41□□□□□ -1.06
LINC00643-202ENST00000553426 C14orf177Q52M58 125 aa8.41□□□□□ -1.06
LINC00643-202ENST00000553426 TMUB2Q71RG4 321 aa8.41□□□□□ -1.06
LINC00643-202ENST00000553426 OR10AG1Q8NH19 301 aa8.41□□□□□ -1.06
LINC00643-202ENST00000553426 C1orf43Q9BWL3 253 aa8.41□□□□□ -1.06
LINC00643-202ENST00000553426 HMCN2Q8NDA2 5059 aa8.41□□□□□ -1.06
LINC00643-202ENST00000553426 TEX46H3BTG2 121 aa8.4□□□□□ -1.06
LINC00643-202ENST00000553426 SNAI2O43623 268 aa8.4□□□□□ -1.06
LINC00643-202ENST00000553426 TMEM97Q5BJF2 176 aa8.4□□□□□ -1.06
LINC00643-202ENST00000553426 NEXN-AS1Q8NBZ9 246 aa8.4□□□□□ -1.06
LINC00643-202ENST00000553426 CHCHD5Q9BSY4 110 aa8.4□□□□□ -1.06
LINC00643-202ENST00000553426 MLST8Q9BVC4 326 aa8.4□□□□□ -1.06
LINC00643-202ENST00000553426 SSBP4Q9BWG4 385 aaPredicted RBP8.4□□□□□ -1.06
LINC00643-202ENST00000553426 MANBALQ9NQG1 85 aa8.4□□□□□ -1.06
LINC00643-202ENST00000553426 RPL35P42766 123 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms