RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 RASL10AQ92737 203 aa11.45□□□□□ -0.58
SCN8A-206ENST00000550891 RPL39LQ96EH5 51 aaKnown RBP11.45□□□□□ -0.58
SCN8A-206ENST00000550891 JPT2Q9H910 190 aa11.45□□□□□ -0.58
SCN8A-206ENST00000550891 ODF3L2Q3SX64 289 aa11.44□□□□□ -0.58
SCN8A-206ENST00000550891 Q6ZN92 141 aa11.44□□□□□ -0.58
SCN8A-206ENST00000550891 PRSS47A8MTI9 375 aa11.44□□□□□ -0.58
SCN8A-206ENST00000550891 A8MTW9 85 aa11.44□□□□□ -0.58
SCN8A-206ENST00000550891 ORMDL2Q53FV1 153 aa11.44□□□□□ -0.58
SCN8A-206ENST00000550891 GOLT1BQ9Y3E0 138 aa11.44□□□□□ -0.58
SCN8A-206ENST00000550891 RBMY1BA6NDE4 496 aaKnown RBP11.43□□□□□ -0.58
SCN8A-206ENST00000550891 RBMY1EA6NEQ0 496 aaKnown RBP11.43□□□□□ -0.58
SCN8A-206ENST00000550891 RBMY1DP0C7P1 496 aaKnown RBP11.43□□□□□ -0.58
SCN8A-206ENST00000550891 DEFB125Q8N687 156 aa11.43□□□□□ -0.58
SCN8A-206ENST00000550891 ST20Q9HBF5 79 aa11.43□□□□□ -0.58
SCN8A-206ENST00000550891 ATP5LO75964 103 aa11.43□□□□□ -0.58
SCN8A-206ENST00000550891 IGLC3P0DOY3 106 aa11.43□□□□□ -0.58
SCN8A-206ENST00000550891 IGLL1P15814 213 aa11.43□□□□□ -0.58
SCN8A-206ENST00000550891 ZNF415Q09FC8 603 aa11.43□□□□□ -0.58
SCN8A-206ENST00000550891 NDUFA11Q86Y39 141 aa11.43□□□□□ -0.58
SCN8A-206ENST00000550891 LINC01546A6NGU7 62 aa11.43□□□□□ -0.58
SCN8A-206ENST00000550891 FOSL1P15407 271 aa11.43□□□□□ -0.58
SCN8A-206ENST00000550891 HNRNPA3P51991 378 aaKnown RBP11.43□□□□□ -0.58
SCN8A-206ENST00000550891 IGLV2-18A0A075B6J9 118 aa11.42□□□□□ -0.58
SCN8A-206ENST00000550891 hDV102S1A0JD36 115 aa11.42□□□□□ -0.58
SCN8A-206ENST00000550891 XCL2Q9UBD3 114 aa11.42□□□□□ -0.58
SCN8A-206ENST00000550891 CSTL1Q9H114 145 aa11.42□□□□□ -0.58
SCN8A-206ENST00000550891 MUC4Q99102 2169 aa11.42□□□□□ -0.58
SCN8A-206ENST00000550891 M0R143 59 aa11.41□□□□□ -0.58
SCN8A-206ENST00000550891 LGALS9BQ3B8N2 356 aa11.41□□□□□ -0.58
SCN8A-206ENST00000550891 LGALS9CQ6DKI2 356 aa11.41□□□□□ -0.58
SCN8A-206ENST00000550891 SUMO4Q6EEV6 95 aa11.41□□□□□ -0.58
SCN8A-206ENST00000550891 K7EMI3 77 aa11.41□□□□□ -0.58
SCN8A-206ENST00000550891 RBMY1A1P0DJD3 496 aaKnown RBP11.41□□□□□ -0.58
SCN8A-206ENST00000550891 RBMY1CP0DJD4 496 aa11.41□□□□□ -0.58
SCN8A-206ENST00000550891 RBMY1FQ15415 496 aaKnown RBP11.41□□□□□ -0.58
SCN8A-206ENST00000550891 KIF25-AS1Q9Y6Z4 181 aa11.41□□□□□ -0.58
SCN8A-206ENST00000550891 IGHV3OR16-12A0A075B7B8 117 aa11.41□□□□□ -0.58
SCN8A-206ENST00000550891 KIR2DL4Q99706 377 aa11.4□□□□□ -0.58
SCN8A-206ENST00000550891 LBHQ53QV2 105 aaPredicted RBP11.4□□□□□ -0.59
SCN8A-206ENST00000550891 G0S2P27469 103 aa11.39□□□□□ -0.59
SCN8A-206ENST00000550891 CLUHP3Q96NS8 147 aa11.39□□□□□ -0.59
SCN8A-206ENST00000550891 ADARB2-AS1A8MUL3 147 aa11.39□□□□□ -0.59
SCN8A-206ENST00000550891 IGLV1-51P01701 117 aa11.39□□□□□ -0.59
SCN8A-206ENST00000550891 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.38□□□□□ -0.59
SCN8A-206ENST00000550891 M0R2P5 195 aa11.38□□□□□ -0.59
SCN8A-206ENST00000550891 LINC00315P59091 139 aa11.38□□□□□ -0.59
SCN8A-206ENST00000550891 CTAG1AP78358 180 aa11.38□□□□□ -0.59
SCN8A-206ENST00000550891 POM121L12Q8N7R1 296 aa11.38□□□□□ -0.59
SCN8A-206ENST00000550891 VCYO14598 125 aa11.38□□□□□ -0.59
SCN8A-206ENST00000550891 BATFQ16520 125 aa11.38□□□□□ -0.59
SCN8A-206ENST00000550891 H7C1H1 209 aa11.38□□□□□ -0.59
SCN8A-206ENST00000550891 SCGB3A1Q96QR1 104 aa11.38□□□□□ -0.59
SCN8A-206ENST00000550891 SETXQ7Z333 2677 aaKnown RBP11.37□□□□□ -0.59
SCN8A-206ENST00000550891 CRYGDP07320 174 aa11.37□□□□□ -0.59
SCN8A-206ENST00000550891 TRPT1Q86TN4 253 aaKnown RBP11.37□□□□□ -0.59
SCN8A-206ENST00000550891 SDHAF1A6NFY7 115 aa11.36□□□□□ -0.59
SCN8A-206ENST00000550891 A8MWV9 139 aa11.36□□□□□ -0.59
SCN8A-206ENST00000550891 CRLF1O75462 422 aa11.36□□□□□ -0.59
SCN8A-206ENST00000550891 SLC25A34Q6PIV7 304 aa11.36□□□□□ -0.59
SCN8A-206ENST00000550891 NEGR1Q7Z3B1 354 aa11.36□□□□□ -0.59
SCN8A-206ENST00000550891 SPXQ9BT56 116 aa11.36□□□□□ -0.59
SCN8A-206ENST00000550891 C2CD3Q4AC94 2353 aa11.36□□□□□ -0.59
SCN8A-206ENST00000550891 PRM2P04554 102 aa11.36□□□□□ -0.59
SCN8A-206ENST00000550891 NOTCH3Q9UM47 2321 aa11.36□□□□□ -0.59
SCN8A-206ENST00000550891 OTOGQ6ZRI0 2925 aa11.35□□□□□ -0.59
SCN8A-206ENST00000550891 C2orf66Q6UXQ4 117 aa11.35□□□□□ -0.59
SCN8A-206ENST00000550891 AKAP9Q99996 3911 aa11.35□□□□□ -0.59
SCN8A-206ENST00000550891 FN1P02751 2386 aaKnown RBP11.35□□□□□ -0.59
SCN8A-206ENST00000550891 MRPL52Q86TS9 123 aaKnown RBP11.35□□□□□ -0.59
SCN8A-206ENST00000550891 SNHG12Q9BXW3 62 aa11.35□□□□□ -0.59
SCN8A-206ENST00000550891 IGHV3-73A0A0B4J1V6 119 aa11.34□□□□□ -0.59
SCN8A-206ENST00000550891 EREGO14944 169 aa11.34□□□□□ -0.59
SCN8A-206ENST00000550891 DKK2Q9UBU2 259 aa11.34□□□□□ -0.59
SCN8A-206ENST00000550891 CYSLTR1Q9Y271 337 aa11.34□□□□□ -0.59
SCN8A-206ENST00000550891 RPL32P62910 135 aaKnown RBP11.34□□□□□ -0.59
SCN8A-206ENST00000550891 LINC00467Q9BRT7 94 aa11.34□□□□□ -0.59
SCN8A-206ENST00000550891 M0QY20 66 aa11.34□□□□□ -0.59
SCN8A-206ENST00000550891 RPL35AP18077 110 aaKnown RBP11.34□□□□□ -0.59
SCN8A-206ENST00000550891 FAM110AQ9BQ89 295 aa11.34□□□□□ -0.59
SCN8A-206ENST00000550891 LINC01549A6NIU2 74 aa11.33□□□□□ -0.6
SCN8A-206ENST00000550891 KRTAP10-3P60369 221 aa11.33□□□□□ -0.6
SCN8A-206ENST00000550891 TOMM6Q96B49 74 aa11.33□□□□□ -0.6
SCN8A-206ENST00000550891 C1QTNF4Q9BXJ3 329 aa11.33□□□□□ -0.6
SCN8A-206ENST00000550891 TRBV6-5A0A0K0K1A5 114 aa11.33□□□□□ -0.6
SCN8A-206ENST00000550891 DPM2O94777 84 aa11.33□□□□□ -0.6
SCN8A-206ENST00000550891 ODF1Q14990 250 aa11.33□□□□□ -0.6
SCN8A-206ENST00000550891 PIK3CD-AS1Q5SR53 167 aa11.33□□□□□ -0.6
SCN8A-206ENST00000550891 IGKCP01834 107 aa11.32□□□□□ -0.6
SCN8A-206ENST00000550891 POLR2KP53803 58 aaKnown RBP11.32□□□□□ -0.6
SCN8A-206ENST00000550891 STPG4Q8N801 248 aa11.32□□□□□ -0.6
SCN8A-206ENST00000550891 DEFB104AQ8WTQ1 72 aa11.32□□□□□ -0.6
SCN8A-206ENST00000550891 C2orf88Q9BSF0 95 aa11.32□□□□□ -0.6
SCN8A-206ENST00000550891 MRPL16Q9NX20 251 aaKnown RBP11.32□□□□□ -0.6
SCN8A-206ENST00000550891 RHODO00212 210 aa11.32□□□□□ -0.6
SCN8A-206ENST00000550891 TCTAP57738 103 aa11.32□□□□□ -0.6
SCN8A-206ENST00000550891 BEAN1Q3B7T3 259 aa11.32□□□□□ -0.6
SCN8A-206ENST00000550891 LINC00482Q8N8I6 264 aa11.32□□□□□ -0.6
SCN8A-206ENST00000550891 WFDC10AQ9H1F0 79 aa11.32□□□□□ -0.6
SCN8A-206ENST00000550891 MRPS16Q9Y3D3 137 aaKnown RBP11.31□□□□□ -0.6
SCN8A-206ENST00000550891 NSD1Q96L73 2696 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms