RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 C14orf178Q8N769 122 aaPredicted RBP14.87□□□□□ -0.03
VPS29-206ENST00000549578 AP1S3Q96PC3 154 aa14.87□□□□□ -0.03
VPS29-206ENST00000549578 DYNC2H1Q8NCM8 4307 aaKnown RBP14.87□□□□□ -0.03
VPS29-206ENST00000549578 TRAV26-1A0A087WT03 109 aa14.87□□□□□ -0.03
VPS29-206ENST00000549578 A0A0J9YY99 117 aa14.87□□□□□ -0.03
VPS29-206ENST00000549578 C7orf77A4D0Y5 90 aa14.87□□□□□ -0.03
VPS29-206ENST00000549578 UFSP1Q6NVU6 142 aa14.87□□□□□ -0.03
VPS29-206ENST00000549578 BORCS7Q96B45 105 aa14.87□□□□□ -0.03
VPS29-206ENST00000549578 KLK5Q9Y337 293 aaPredicted RBP14.87□□□□□ -0.03
VPS29-206ENST00000549578 A0A1B0GUT8 65 aa14.86□□□□□ -0.03
VPS29-206ENST00000549578 HHLA3Q9XRX5 114 aa14.86□□□□□ -0.03
VPS29-206ENST00000549578 ZFP2Q6ZN57 461 aa14.85□□□□□ -0.03
VPS29-206ENST00000549578 SVBPQ8N300 66 aa14.85□□□□□ -0.03
VPS29-206ENST00000549578 CTDSP1Q9GZU7 261 aa14.85□□□□□ -0.03
VPS29-206ENST00000549578 RHODO00212 210 aa14.84□□□□□ -0.03
VPS29-206ENST00000549578 CIDEAO60543 219 aa14.84□□□□□ -0.03
VPS29-206ENST00000549578 GATA1P15976 413 aaPredicted RBP14.84□□□□□ -0.03
VPS29-206ENST00000549578 EVI2AP22794 236 aa14.84□□□□□ -0.03
VPS29-206ENST00000549578 FAM3BP58499 235 aaPredicted RBP14.84□□□□□ -0.03
VPS29-206ENST00000549578 RHEBQ15382 184 aa14.84□□□□□ -0.03
VPS29-206ENST00000549578 Q6ZSN1 163 aa14.84□□□□□ -0.03
VPS29-206ENST00000549578 PRO0255Q9UI72 69 aa14.84□□□□□ -0.03
VPS29-206ENST00000549578 TENM2Q9NT68 2774 aa14.84□□□□□ -0.03
VPS29-206ENST00000549578 TRGC1P0CF51 173 aa14.83□□□□□ -0.04
VPS29-206ENST00000549578 CRYBA4P53673 196 aa14.83□□□□□ -0.04
VPS29-206ENST00000549578 VSIG2Q96IQ7 327 aa14.83□□□□□ -0.04
VPS29-206ENST00000549578 RPS10P5Q9NQ39 176 aa14.83□□□□□ -0.04
VPS29-206ENST00000549578 KIF25-AS1Q9Y6Z4 181 aa14.83□□□□□ -0.04
VPS29-206ENST00000549578 SNAPINO95295 136 aa14.82□□□□□ -0.04
VPS29-206ENST00000549578 SMIM17P0DL12 118 aa14.82□□□□□ -0.04
VPS29-206ENST00000549578 FAM210BQ96KR6 192 aa14.82□□□□□ -0.04
VPS29-206ENST00000549578 PAX4O43316 350 aa14.82□□□□□ -0.04
VPS29-206ENST00000549578 SLAQ13239 276 aa14.82□□□□□ -0.04
VPS29-206ENST00000549578 SLC25A29Q8N8R3 303 aa14.82□□□□□ -0.04
VPS29-206ENST00000549578 LINC00315P59091 139 aa14.81□□□□□ -0.04
VPS29-206ENST00000549578 RIGQ13278 110 aa14.81□□□□□ -0.04
VPS29-206ENST00000549578 ZNF56Q15929 161 aa14.81□□□□□ -0.04
VPS29-206ENST00000549578 MRPL54Q6P161 138 aaKnown RBP14.81□□□□□ -0.04
VPS29-206ENST00000549578 PLECQ15149 4684 aaKnown RBP14.81□□□□□ -0.04
VPS29-206ENST00000549578 A0A087WWC5 75 aa14.8□□□□□ -0.04
VPS29-206ENST00000549578 MGPP08493 103 aa14.8□□□□□ -0.04
VPS29-206ENST00000549578 DPH3P1Q9H4G8 78 aa14.8□□□□□ -0.04
VPS29-206ENST00000549578 APLNQ9ULZ1 77 aa14.79□□□□□ -0.04
VPS29-206ENST00000549578 LOC100131303A0A0U1RQF7 123 aa14.78□□□□□ -0.04
VPS29-206ENST00000549578 TRBV6-4A0A1B0GX49 114 aa14.78□□□□□ -0.04
VPS29-206ENST00000549578 F5H697 171 aa14.78□□□□□ -0.04
VPS29-206ENST00000549578 NUDT3O95989 172 aa14.78□□□□□ -0.04
VPS29-206ENST00000549578 SMIM15Q7Z3B0 74 aa14.78□□□□□ -0.04
VPS29-206ENST00000549578 IMMP2LQ96T52 175 aa14.78□□□□□ -0.04
VPS29-206ENST00000549578 TMEM242Q9NWH2 141 aa14.78□□□□□ -0.04
VPS29-206ENST00000549578 H3BNG1 76 aa14.77□□□□□ -0.04
VPS29-206ENST00000549578 K7EQD1 137 aa14.77□□□□□ -0.04
VPS29-206ENST00000549578 GYPEP15421 78 aa14.77□□□□□ -0.04
VPS29-206ENST00000549578 CAMPP49913 170 aa14.77□□□□□ -0.04
VPS29-206ENST00000549578 RHOHQ15669 191 aa14.77□□□□□ -0.04
VPS29-206ENST00000549578 ATRAIDQ6UW56 229 aa14.77□□□□□ -0.04
VPS29-206ENST00000549578 RAB4BP61018 213 aa14.76□□□□□ -0.05
VPS29-206ENST00000549578 C15orf53Q8NAA6 179 aa14.76□□□□□ -0.05
VPS29-206ENST00000549578 Q9UF83 564 aa14.76□□□□□ -0.05
VPS29-206ENST00000549578 URGCP-MRPS24S4R325 110 aa14.76□□□□□ -0.05
VPS29-206ENST00000549578 A0A1B0GXF2 115 aa14.76□□□□□ -0.05
VPS29-206ENST00000549578 P0DMU3 169 aa14.76□□□□□ -0.05
VPS29-206ENST00000549578 FAM231AP0DMU4 169 aa14.76□□□□□ -0.05
VPS29-206ENST00000549578 FAM231CP0DMU5 169 aa14.76□□□□□ -0.05
VPS29-206ENST00000549578 KCNIP4Q6PIL6 250 aa14.76□□□□□ -0.05
VPS29-206ENST00000549578 PRADC1Q9BSG0 188 aa14.76□□□□□ -0.05
VPS29-206ENST00000549578 TMEM191AQ9H0A3 160 aa14.76□□□□□ -0.05
VPS29-206ENST00000549578 TCTAP57738 103 aa14.75□□□□□ -0.05
VPS29-206ENST00000549578 HBBP68871 147 aa14.75□□□□□ -0.05
VPS29-206ENST00000549578 BTF3L4Q96K17 158 aa14.75□□□□□ -0.05
VPS29-206ENST00000549578 A0A096LPF7 62 aa14.74□□□□□ -0.05
VPS29-206ENST00000549578 A0A1B0GW15 77 aa14.74□□□□□ -0.05
VPS29-206ENST00000549578 SUMO4Q6EEV6 95 aa14.74□□□□□ -0.05
VPS29-206ENST00000549578 ATP5L2Q7Z4Y8 100 aa14.74□□□□□ -0.05
VPS29-206ENST00000549578 ICOSQ9Y6W8 199 aa14.74□□□□□ -0.05
VPS29-206ENST00000549578 S100PP25815 95 aa14.73□□□□□ -0.05
VPS29-206ENST00000549578 AMN1Q8IY45 258 aa14.72□□□□□ -0.05
VPS29-206ENST00000549578 TRAV26-2A0A0B4J265 109 aa14.71□□□□□ -0.05
VPS29-206ENST00000549578 MRPL23Q16540 153 aaKnown RBP14.71□□□□□ -0.05
VPS29-206ENST00000549578 RNF185Q96GF1 192 aa14.71□□□□□ -0.05
VPS29-206ENST00000549578 GAGE12JA6NER3 117 aa14.71□□□□□ -0.06
VPS29-206ENST00000549578 M0QY20 66 aa14.71□□□□□ -0.06
VPS29-206ENST00000549578 S100A8P05109 93 aa14.71□□□□□ -0.06
VPS29-206ENST00000549578 GAGE1Q13065 139 aa14.71□□□□□ -0.06
VPS29-206ENST00000549578 GAGE4Q13068 117 aa14.71□□□□□ -0.06
VPS29-206ENST00000549578 GAGE5Q13069 117 aa14.71□□□□□ -0.06
VPS29-206ENST00000549578 GAGE13Q4V321 117 aa14.71□□□□□ -0.06
VPS29-206ENST00000549578 RAB4AP20338 218 aa14.7□□□□□ -0.06
VPS29-206ENST00000549578 SRIP30626 198 aa14.7□□□□□ -0.06
VPS29-206ENST00000549578 GATD1Q8NB37 220 aa14.7□□□□□ -0.06
VPS29-206ENST00000549578 TRAV9-1A0A075B6T8 112 aa14.69□□□□□ -0.06
VPS29-206ENST00000549578 TRBV10-1A0A0K0K1A3 114 aa14.69□□□□□ -0.06
VPS29-206ENST00000549578 NEXN-AS1Q8NBZ9 246 aa14.69□□□□□ -0.06
VPS29-206ENST00000549578 H7C1H1 209 aa14.68□□□□□ -0.06
VPS29-206ENST00000549578 FAM104BQ5XKR9 115 aa14.68□□□□□ -0.06
VPS29-206ENST00000549578 ZNRF2Q8NHG8 242 aa14.68□□□□□ -0.06
VPS29-206ENST00000549578 LINC00694P0DN24 101 aa14.67□□□□□ -0.06
VPS29-206ENST00000549578 RASL11AQ6T310 242 aa14.67□□□□□ -0.06
VPS29-206ENST00000549578 NEGR1Q7Z3B1 354 aa14.67□□□□□ -0.06
VPS29-206ENST00000549578 LYSTQ99698 3801 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms