RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 SAMD13Q5VXD3 122 aa8.39□□□□□ -1.07
LINC00661-204ENST00000549354 DPF1Q92782 380 aa8.39□□□□□ -1.07
LINC00661-204ENST00000549354 FAM223BA6NKX1 122 aa8.39□□□□□ -1.07
LINC00661-204ENST00000549354 KNCNA6PVL3 124 aa8.39□□□□□ -1.07
LINC00661-204ENST00000549354 PLA2G2AP14555 144 aa8.39□□□□□ -1.07
LINC00661-204ENST00000549354 RPL39P62891 51 aaKnown RBP8.39□□□□□ -1.07
LINC00661-204ENST00000549354 ANXA2RQ3ZCQ2 193 aa8.39□□□□□ -1.07
LINC00661-204ENST00000549354 FAM223AQ8IWN6 122 aa8.39□□□□□ -1.07
LINC00661-204ENST00000549354 Q8N8P6 123 aa8.39□□□□□ -1.07
LINC00661-204ENST00000549354 ADARB2-AS1A8MUL3 147 aa8.39□□□□□ -1.07
LINC00661-204ENST00000549354 IGLL5B9A064 214 aa8.39□□□□□ -1.07
LINC00661-204ENST00000549354 SIVA1O15304 175 aa8.39□□□□□ -1.07
LINC00661-204ENST00000549354 C12orf74Q32Q52 190 aa8.39□□□□□ -1.07
LINC00661-204ENST00000549354 TRAV8-2A0A0B4J237 113 aa8.38□□□□□ -1.07
LINC00661-204ENST00000549354 CLPSL1A2RUU4 121 aa8.38□□□□□ -1.07
LINC00661-204ENST00000549354 Q5PR19 223 aa8.38□□□□□ -1.07
LINC00661-204ENST00000549354 EEF1AKMT3Q96AZ1 226 aa8.38□□□□□ -1.07
LINC00661-204ENST00000549354 ZFAND3Q9H8U3 227 aa8.38□□□□□ -1.07
LINC00661-204ENST00000549354 IGHV7-4-1A0A0J9YVY3 117 aa8.37□□□□□ -1.07
LINC00661-204ENST00000549354 OR11H12B2RN74 326 aa8.37□□□□□ -1.07
LINC00661-204ENST00000549354 CD7P09564 240 aa8.37□□□□□ -1.07
LINC00661-204ENST00000549354 NRACQ8N912 160 aa8.37□□□□□ -1.07
LINC00661-204ENST00000549354 OR11H1Q8NG94 326 aa8.37□□□□□ -1.07
LINC00661-204ENST00000549354 OR11H2Q8NH07 326 aa8.37□□□□□ -1.07
LINC00661-204ENST00000549354 PSMG3-AS1Q96PY0 264 aa8.37□□□□□ -1.07
LINC00661-204ENST00000549354 ITPR2Q14571 2701 aa8.37□□□□□ -1.07
LINC00661-204ENST00000549354 A0A1B0GWB2 263 aa8.37□□□□□ -1.07
LINC00661-204ENST00000549354 RNF223E7ERA6 249 aa8.37□□□□□ -1.07
LINC00661-204ENST00000549354 HLA-DRB4P13762 266 aa8.37□□□□□ -1.07
LINC00661-204ENST00000549354 LINC01559Q495D7 138 aa8.37□□□□□ -1.07
LINC00661-204ENST00000549354 TMEM170BQ5T4T1 132 aa8.37□□□□□ -1.07
LINC00661-204ENST00000549354 HLA-DRB4X5D2U9 266 aa8.37□□□□□ -1.07
LINC00661-204ENST00000549354 IGHV3OR16-12A0A075B7B8 117 aa8.37□□□□□ -1.07
LINC00661-204ENST00000549354 A0A0U1RRA0 63 aa8.37□□□□□ -1.07
LINC00661-204ENST00000549354 ATP5LO75964 103 aa8.37□□□□□ -1.07
LINC00661-204ENST00000549354 CFHR3Q02985 330 aa8.37□□□□□ -1.07
LINC00661-204ENST00000549354 MUC4Q99102 2169 aa8.37□□□□□ -1.07
LINC00661-204ENST00000549354 CR1P17927 2039 aa8.36□□□□□ -1.07
LINC00661-204ENST00000549354 IGLV2-18A0A075B6J9 118 aa8.36□□□□□ -1.07
LINC00661-204ENST00000549354 PHLDA1Q8WV24 401 aaPredicted RBP8.36□□□□□ -1.07
LINC00661-204ENST00000549354 PTH2Q96A98 100 aa8.36□□□□□ -1.07
LINC00661-204ENST00000549354 CHTOPQ9Y3Y2 248 aaKnown RBP8.36□□□□□ -1.07
LINC00661-204ENST00000549354 NBPF19A0A087WUL8 3843 aa8.36□□□□□ -1.07
LINC00661-204ENST00000549354 PRSS29PA6NIE9 313 aa8.36□□□□□ -1.07
LINC00661-204ENST00000549354 DEFB136Q30KP8 78 aa8.36□□□□□ -1.07
LINC00661-204ENST00000549354 OR10J6PQ8NGY7 276 aa8.36□□□□□ -1.07
LINC00661-204ENST00000549354 MRPL16Q9NX20 251 aaKnown RBP8.36□□□□□ -1.07
LINC00661-204ENST00000549354 PGPEP1Q9NXJ5 209 aa8.36□□□□□ -1.07
LINC00661-204ENST00000549354 J3QKU1 62 aa8.36□□□□□ -1.07
LINC00661-204ENST00000549354 IGLV1-40P01703 118 aa8.36□□□□□ -1.07
LINC00661-204ENST00000549354 DEFB112Q30KQ8 113 aa8.36□□□□□ -1.07
LINC00661-204ENST00000549354 RHPN1-AS1Q9BWJ2 59 aa8.36□□□□□ -1.07
LINC00661-204ENST00000549354 ZMAT4Q9H898 229 aa8.36□□□□□ -1.07
LINC00661-204ENST00000549354 A0A087WX48 190 aa8.35□□□□□ -1.07
LINC00661-204ENST00000549354 RAB9AP51151 201 aa8.35□□□□□ -1.07
LINC00661-204ENST00000549354 PSMG4Q5JS54 123 aa8.35□□□□□ -1.07
LINC00661-204ENST00000549354 FOXI2Q6ZQN5 318 aa8.35□□□□□ -1.07
LINC00661-204ENST00000549354 USMG5Q96IX5 58 aa8.35□□□□□ -1.07
LINC00661-204ENST00000549354 SPAG8Q99932 426 aaPredicted RBP8.35□□□□□ -1.07
LINC00661-204ENST00000549354 U3KQE9 123 aa8.35□□□□□ -1.07
LINC00661-204ENST00000549354 ZNF815PA8K554 130 aa8.35□□□□□ -1.07
LINC00661-204ENST00000549354 DUSP14O95147 198 aaKnown RBP8.35□□□□□ -1.07
LINC00661-204ENST00000549354 GAGE13Q4V321 117 aa8.35□□□□□ -1.07
LINC00661-204ENST00000549354 PLEKHB2Q96CS7 222 aa8.35□□□□□ -1.07
LINC00661-204ENST00000549354 GAGE12HA6NDE8 117 aa8.34□□□□□ -1.07
LINC00661-204ENST00000549354 SPINK13Q1W4C9 94 aa8.34□□□□□ -1.07
LINC00661-204ENST00000549354 SMIM2Q9BVW6 85 aa8.34□□□□□ -1.07
LINC00661-204ENST00000549354 LINC01549A6NIU2 74 aa8.34□□□□□ -1.07
LINC00661-204ENST00000549354 PSMB2P49721 201 aa8.34□□□□□ -1.07
LINC00661-204ENST00000549354 SUMO2P61956 95 aaKnown RBP8.34□□□□□ -1.07
LINC00661-204ENST00000549354 ZNF56Q15929 161 aa8.34□□□□□ -1.07
LINC00661-204ENST00000549354 C2orf66Q6UXQ4 117 aa8.34□□□□□ -1.07
LINC00661-204ENST00000549354 SIGMAR1Q99720 223 aa8.34□□□□□ -1.07
LINC00661-204ENST00000549354 C20orf78Q9BR46 151 aa8.34□□□□□ -1.07
LINC00661-204ENST00000549354 PRADC1Q9BSG0 188 aa8.34□□□□□ -1.07
LINC00661-204ENST00000549354 Q6YL49 198 aa8.34□□□□□ -1.07
LINC00661-204ENST00000549354 ZFP2Q6ZN57 461 aa8.34□□□□□ -1.07
LINC00661-204ENST00000549354 CNFNQ9BYD5 112 aa8.34□□□□□ -1.07
LINC00661-204ENST00000549354 E9PLD3 99 aa8.33□□□□□ -1.08
LINC00661-204ENST00000549354 RASL10AQ92737 203 aa8.33□□□□□ -1.08
LINC00661-204ENST00000549354 Q96MF0 132 aa8.33□□□□□ -1.08
LINC00661-204ENST00000549354 TM2D2Q9BX73 214 aa8.33□□□□□ -1.08
LINC00661-204ENST00000549354 SPANXB1Q9NS25 103 aaPredicted RBP8.33□□□□□ -1.08
LINC00661-204ENST00000549354 F8VRH5 84 aa8.33□□□□□ -1.08
LINC00661-204ENST00000549354 H7C1H1 209 aa8.33□□□□□ -1.08
LINC00661-204ENST00000549354 RAX2Q96IS3 184 aa8.33□□□□□ -1.08
LINC00661-204ENST00000549354 SLC50A1Q9BRV3 221 aa8.33□□□□□ -1.08
LINC00661-204ENST00000549354 TMEM89A2RUT3 159 aa8.32□□□□□ -1.08
LINC00661-204ENST00000549354 IGHV4-59P01825 116 aa8.32□□□□□ -1.08
LINC00661-204ENST00000549354 P0DMU3 169 aa8.32□□□□□ -1.08
LINC00661-204ENST00000549354 FAM231AP0DMU4 169 aa8.32□□□□□ -1.08
LINC00661-204ENST00000549354 FAM231CP0DMU5 169 aa8.32□□□□□ -1.08
LINC00661-204ENST00000549354 CEMP1Q6PRD7 247 aaPredicted RBP8.32□□□□□ -1.08
LINC00661-204ENST00000549354 HIGD1BQ9P298 99 aa8.32□□□□□ -1.08
LINC00661-204ENST00000549354 FLNBO75369 2602 aaKnown RBP8.32□□□□□ -1.08
LINC00661-204ENST00000549354 MYMXA0A1B0GTQ4 84 aa8.32□□□□□ -1.08
LINC00661-204ENST00000549354 HOXA3O43365 443 aaPredicted RBP8.32□□□□□ -1.08
LINC00661-204ENST00000549354 SCGB1C2P0DMR2 95 aa8.32□□□□□ -1.08
LINC00661-204ENST00000549354 ASIPP42127 132 aa8.32□□□□□ -1.08
LINC00661-204ENST00000549354 COX8CQ7Z4L0 72 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms