RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 LINC01587Q99440 93 aa10.81□□□□□ -0.68
CACNB3-209ENST00000548860 ZANQ9Y493 2812 aa10.81□□□□□ -0.68
CACNB3-209ENST00000548860 MSMBP08118 114 aa10.81□□□□□ -0.68
CACNB3-209ENST00000548860 FGF6P10767 208 aa10.81□□□□□ -0.68
CACNB3-209ENST00000548860 SAMD13Q5VXD3 122 aa10.81□□□□□ -0.68
CACNB3-209ENST00000548860 ZFAND3Q9H8U3 227 aa10.81□□□□□ -0.68
CACNB3-209ENST00000548860 IGLC6P0CF74 106 aa10.8□□□□□ -0.68
CACNB3-209ENST00000548860 DEFB112Q30KQ8 113 aa10.8□□□□□ -0.68
CACNB3-209ENST00000548860 BOD1L2Q8IYS8 172 aa10.8□□□□□ -0.68
CACNB3-209ENST00000548860 TRAV8-2A0A0B4J237 113 aa10.8□□□□□ -0.68
CACNB3-209ENST00000548860 GAGE13Q4V321 117 aa10.79□□□□□ -0.68
CACNB3-209ENST00000548860 SYT8Q8NBV8 401 aa10.79□□□□□ -0.68
CACNB3-209ENST00000548860 VCX2Q9H322 139 aa10.79□□□□□ -0.68
CACNB3-209ENST00000548860 MDFICQ9P1T7 246 aa10.79□□□□□ -0.68
CACNB3-209ENST00000548860 K7EP34 96 aa10.79□□□□□ -0.68
CACNB3-209ENST00000548860 CRXO43186 299 aaPredicted RBP10.78□□□□□ -0.68
CACNB3-209ENST00000548860 TNFRSF18Q9Y5U5 241 aa10.78□□□□□ -0.68
CACNB3-209ENST00000548860 F8VRH5 84 aa10.78□□□□□ -0.68
CACNB3-209ENST00000548860 IGHG4P01861 327 aa10.78□□□□□ -0.68
CACNB3-209ENST00000548860 TSSC4Q9Y5U2 329 aaPredicted RBP10.78□□□□□ -0.68
CACNB3-209ENST00000548860 CEMP1Q6PRD7 247 aaPredicted RBP10.78□□□□□ -0.68
CACNB3-209ENST00000548860 ZNF493Q6ZR52 646 aa10.78□□□□□ -0.68
CACNB3-209ENST00000548860 UTP20O75691 2785 aaKnown RBP10.78□□□□□ -0.68
CACNB3-209ENST00000548860 LINC01559Q495D7 138 aa10.77□□□□□ -0.68
CACNB3-209ENST00000548860 GATD1Q8NB37 220 aa10.77□□□□□ -0.68
CACNB3-209ENST00000548860 XCL2Q9UBD3 114 aa10.77□□□□□ -0.69
CACNB3-209ENST00000548860 CLPSL1A2RUU4 121 aa10.77□□□□□ -0.69
CACNB3-209ENST00000548860 P0DMU3 169 aa10.77□□□□□ -0.69
CACNB3-209ENST00000548860 FAM231AP0DMU4 169 aa10.77□□□□□ -0.69
CACNB3-209ENST00000548860 FAM231CP0DMU5 169 aa10.77□□□□□ -0.69
CACNB3-209ENST00000548860 COX6B1P14854 86 aa10.77□□□□□ -0.69
CACNB3-209ENST00000548860 CFHR3Q02985 330 aa10.77□□□□□ -0.69
CACNB3-209ENST00000548860 C12orf74Q32Q52 190 aa10.77□□□□□ -0.69
CACNB3-209ENST00000548860 CEND1Q8N111 149 aa10.77□□□□□ -0.69
CACNB3-209ENST00000548860 HRNRQ86YZ3 2850 aaPredicted RBP10.77□□□□□ -0.69
CACNB3-209ENST00000548860 TMEM238LA0A1B0GVL6 79 aa10.76□□□□□ -0.69
CACNB3-209ENST00000548860 A6NJY4 79 aa10.76□□□□□ -0.69
CACNB3-209ENST00000548860 CD28P10747 220 aa10.76□□□□□ -0.69
CACNB3-209ENST00000548860 A0A087WX48 190 aa10.76□□□□□ -0.69
CACNB3-209ENST00000548860 A0A1B0GV72 72 aa10.76□□□□□ -0.69
CACNB3-209ENST00000548860 PLNP26678 52 aa10.76□□□□□ -0.69
CACNB3-209ENST00000548860 C11orf71Q6IPW1 123 aa10.76□□□□□ -0.69
CACNB3-209ENST00000548860 PTH2Q96A98 100 aa10.76□□□□□ -0.69
CACNB3-209ENST00000548860 IGHV7-4-1A0A0J9YVY3 117 aa10.75□□□□□ -0.69
CACNB3-209ENST00000548860 PAX2Q02962 417 aa10.75□□□□□ -0.69
CACNB3-209ENST00000548860 APRG1Q8IVJ8 170 aa10.75□□□□□ -0.69
CACNB3-209ENST00000548860 FAM223BA6NKX1 122 aa10.75□□□□□ -0.69
CACNB3-209ENST00000548860 B4DSR2 109 aa10.75□□□□□ -0.69
CACNB3-209ENST00000548860 FAM223AQ8IWN6 122 aa10.75□□□□□ -0.69
CACNB3-209ENST00000548860 GEMIN7Q9H840 131 aaKnown RBP10.75□□□□□ -0.69
CACNB3-209ENST00000548860 MYMXA0A1B0GTQ4 84 aa10.74□□□□□ -0.69
CACNB3-209ENST00000548860 NDUFA4O00483 81 aa10.74□□□□□ -0.69
CACNB3-209ENST00000548860 TOMM7Q9P0U1 55 aa10.74□□□□□ -0.69
CACNB3-209ENST00000548860 AVPP01185 164 aa10.74□□□□□ -0.69
CACNB3-209ENST00000548860 TCTEX1D4Q5JR98 221 aa10.74□□□□□ -0.69
CACNB3-209ENST00000548860 HECTD1Q9ULT8 2610 aa10.74□□□□□ -0.69
CACNB3-209ENST00000548860 SLURP1P55000 103 aa10.74□□□□□ -0.69
CACNB3-209ENST00000548860 OR5A1Q8NGJ0 315 aa10.74□□□□□ -0.69
CACNB3-209ENST00000548860 SMPXQ9UHP9 88 aa10.74□□□□□ -0.69
CACNB3-209ENST00000548860 FBXL19-AS1Q494R0 122 aa10.73□□□□□ -0.69
CACNB3-209ENST00000548860 RASL10AQ92737 203 aa10.73□□□□□ -0.69
CACNB3-209ENST00000548860 CHD6Q8TD26 2715 aa10.73□□□□□ -0.69
CACNB3-209ENST00000548860 VCYO14598 125 aa10.73□□□□□ -0.69
CACNB3-209ENST00000548860 SUMO4Q6EEV6 95 aa10.73□□□□□ -0.69
CACNB3-209ENST00000548860 PLEKHB2Q96CS7 222 aa10.73□□□□□ -0.69
CACNB3-209ENST00000548860 Q8N6K4 173 aa10.72□□□□□ -0.69
CACNB3-209ENST00000548860 MRAP2Q96G30 205 aa10.72□□□□□ -0.69
CACNB3-209ENST00000548860 USMG5Q96IX5 58 aa10.72□□□□□ -0.69
CACNB3-209ENST00000548860 C11orf86A6NJI1 115 aa10.72□□□□□ -0.69
CACNB3-209ENST00000548860 Q8N1Y9 231 aa10.72□□□□□ -0.69
CACNB3-209ENST00000548860 PROK1P58294 105 aa10.72□□□□□ -0.69
CACNB3-209ENST00000548860 CFAP46Q8IYW2 2715 aa10.72□□□□□ -0.69
CACNB3-209ENST00000548860 A0A0J9YXV3 536 aa10.71□□□□□ -0.69
CACNB3-209ENST00000548860 IGLL5B9A064 214 aa10.71□□□□□ -0.69
CACNB3-209ENST00000548860 ZFAND2AQ8N6M9 145 aa10.71□□□□□ -0.69
CACNB3-209ENST00000548860 BAALCQ8WXS3 180 aa10.71□□□□□ -0.69
CACNB3-209ENST00000548860 DAND5Q8N907 189 aa10.71□□□□□ -0.7
CACNB3-209ENST00000548860 TRAV13-1A0A0B4J241 112 aa10.7□□□□□ -0.7
CACNB3-209ENST00000548860 C9orf47Q6ZRZ4 202 aa10.7□□□□□ -0.7
CACNB3-209ENST00000548860 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.7□□□□□ -0.7
CACNB3-209ENST00000548860 IGKV2-29A2NJV5 120 aaPredicted RBP10.7□□□□□ -0.7
CACNB3-209ENST00000548860 HIST2H2BCQ6DN03 193 aa10.7□□□□□ -0.7
CACNB3-209ENST00000548860 TMEM190Q8WZ59 177 aa10.7□□□□□ -0.7
CACNB3-209ENST00000548860 C11orf68Q9H3H3 251 aaKnown RBP10.7□□□□□ -0.7
CACNB3-209ENST00000548860 TRGV1A0A0A0MS02 117 aa10.69□□□□□ -0.7
CACNB3-209ENST00000548860 MEIG1Q5JSS6 88 aa10.69□□□□□ -0.7
CACNB3-209ENST00000548860 RPL35AP18077 110 aaKnown RBP10.69□□□□□ -0.7
CACNB3-209ENST00000548860 ZFP2Q6ZN57 461 aa10.69□□□□□ -0.7
CACNB3-209ENST00000548860 TRBV6-1A0A0K0K1D8 114 aa10.69□□□□□ -0.7
CACNB3-209ENST00000548860 HOXD3P31249 432 aaPredicted RBP10.69□□□□□ -0.7
CACNB3-209ENST00000548860 IGHV4OR15-8A0A075B7B6 117 aa10.68□□□□□ -0.7
CACNB3-209ENST00000548860 A0A087WW49 117 aa10.68□□□□□ -0.7
CACNB3-209ENST00000548860 C18orf65Q6ZTR6 163 aa10.68□□□□□ -0.7
CACNB3-209ENST00000548860 NRACQ8N912 160 aa10.68□□□□□ -0.7
CACNB3-209ENST00000548860 SIGMAR1Q99720 223 aa10.68□□□□□ -0.7
CACNB3-209ENST00000548860 C9JAW5 83 aa10.68□□□□□ -0.7
CACNB3-209ENST00000548860 HHLA3Q9XRX5 114 aa10.68□□□□□ -0.7
CACNB3-209ENST00000548860 FLNBO75369 2602 aaKnown RBP10.68□□□□□ -0.7
CACNB3-209ENST00000548860 PMVKQ15126 192 aa10.68□□□□□ -0.7
CACNB3-209ENST00000548860 IGHV1OR15-1A0A075B7D0 117 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms