RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 C14orf178Q8N769 122 aaPredicted RBP20.51■□□□□ 0.87
BRF1-213ENST00000548421 NACAE9PAV3 2078 aa20.51■□□□□ 0.87
BRF1-213ENST00000548421 COL7A1Q02388 2944 aa20.51■□□□□ 0.87
BRF1-213ENST00000548421 TEX48A0A1B0GUV7 120 aa20.5■□□□□ 0.87
BRF1-213ENST00000548421 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.5■□□□□ 0.87
BRF1-213ENST00000548421 TRGV2A0A075B6R0 118 aa20.5■□□□□ 0.87
BRF1-213ENST00000548421 A0A0J9YWU9 116 aa20.5■□□□□ 0.87
BRF1-213ENST00000548421 HLA-DQA1P01909 254 aa20.5■□□□□ 0.87
BRF1-213ENST00000548421 MT-ND6P03923 174 aa20.5■□□□□ 0.87
BRF1-213ENST00000548421 CFAP126Q5VTH2 177 aa20.5■□□□□ 0.87
BRF1-213ENST00000548421 DPH3P1Q9H4G8 78 aa20.5■□□□□ 0.87
BRF1-213ENST00000548421 CELA1Q9UNI1 258 aa20.5■□□□□ 0.87
BRF1-213ENST00000548421 A0A087WWL8 130 aa20.49■□□□□ 0.87
BRF1-213ENST00000548421 RS1O15537 224 aa20.49■□□□□ 0.87
BRF1-213ENST00000548421 DEFB130BP0DP73 79 aa20.49■□□□□ 0.87
BRF1-213ENST00000548421 DEFB130AP0DP74 79 aa20.49■□□□□ 0.87
BRF1-213ENST00000548421 CRYGDP07320 174 aa20.48■□□□□ 0.87
BRF1-213ENST00000548421 C18orf15Q96N68 181 aa20.48■□□□□ 0.87
BRF1-213ENST00000548421 SAMD10Q9BYL1 202 aa20.48■□□□□ 0.87
BRF1-213ENST00000548421 KIF25-AS1Q9Y6Z4 181 aa20.48■□□□□ 0.87
BRF1-213ENST00000548421 TRAV4A0A0B4J268 109 aa20.47■□□□□ 0.87
BRF1-213ENST00000548421 RPS10P46783 165 aaKnown RBP20.47■□□□□ 0.87
BRF1-213ENST00000548421 FAM74A4Q5TZK3 123 aa20.47■□□□□ 0.87
BRF1-213ENST00000548421 OR4C5Q8NGB2 326 aa20.47■□□□□ 0.87
BRF1-213ENST00000548421 FAM104BQ5XKR9 115 aa20.46■□□□□ 0.87
BRF1-213ENST00000548421 AMN1Q8IY45 258 aa20.46■□□□□ 0.87
BRF1-213ENST00000548421 POM121L12Q8N7R1 296 aa20.46■□□□□ 0.87
BRF1-213ENST00000548421 TRAPPC1Q9Y5R8 145 aa20.46■□□□□ 0.87
BRF1-213ENST00000548421 RHODO00212 210 aa20.44■□□□□ 0.86
BRF1-213ENST00000548421 DAD1P61803 113 aa20.44■□□□□ 0.86
BRF1-213ENST00000548421 FRZBQ92765 325 aa20.44■□□□□ 0.86
BRF1-213ENST00000548421 MGPP08493 103 aa20.43■□□□□ 0.86
BRF1-213ENST00000548421 SLAQ13239 276 aa20.43■□□□□ 0.86
BRF1-213ENST00000548421 UFSP1Q6NVU6 142 aa20.43■□□□□ 0.86
BRF1-213ENST00000548421 ZFP2Q6ZN57 461 aa20.43■□□□□ 0.86
BRF1-213ENST00000548421 MRPL18Q9H0U6 180 aaKnown RBP20.43■□□□□ 0.86
BRF1-213ENST00000548421 APCSP02743 223 aa20.43■□□□□ 0.86
BRF1-213ENST00000548421 RAB4AP20338 218 aa20.43■□□□□ 0.86
BRF1-213ENST00000548421 LINC00315P59091 139 aa20.43■□□□□ 0.86
BRF1-213ENST00000548421 RNF185Q96GF1 192 aa20.43■□□□□ 0.86
BRF1-213ENST00000548421 ZNF479Q96JC4 524 aa20.43■□□□□ 0.86
BRF1-213ENST00000548421 IGHV3-73A0A0B4J1V6 119 aa20.41■□□□□ 0.86
BRF1-213ENST00000548421 CIDEAO60543 219 aa20.41■□□□□ 0.86
BRF1-213ENST00000548421 IGHV3-53P01767 116 aa20.41■□□□□ 0.86
BRF1-213ENST00000548421 ZNF56Q15929 161 aa20.41■□□□□ 0.86
BRF1-213ENST00000548421 FABP9Q0Z7S8 132 aa20.4■□□□□ 0.86
BRF1-213ENST00000548421 MRPL51Q4U2R6 128 aaKnown RBP20.4■□□□□ 0.86
BRF1-213ENST00000548421 F5H697 171 aa20.38■□□□□ 0.85
BRF1-213ENST00000548421 TRGC2P03986 189 aa20.37■□□□□ 0.85
BRF1-213ENST00000548421 C12orf74Q32Q52 190 aa20.37■□□□□ 0.85
BRF1-213ENST00000548421 C11orf45Q8TAV5 145 aa20.37■□□□□ 0.85
BRF1-213ENST00000548421 MRAP2Q96G30 205 aa20.36■□□□□ 0.85
BRF1-213ENST00000548421 TRAV26-2A0A0B4J265 109 aa20.35■□□□□ 0.85
BRF1-213ENST00000548421 ATP5G1P05496 136 aa20.35■□□□□ 0.85
BRF1-213ENST00000548421 KIAA1644Q3SXP7 199 aa20.35■□□□□ 0.85
BRF1-213ENST00000548421 SUMO4Q6EEV6 95 aa20.35■□□□□ 0.85
BRF1-213ENST00000548421 CKS2P33552 79 aa20.34■□□□□ 0.85
BRF1-213ENST00000548421 STAB2Q8WWQ8 2551 aa20.34■□□□□ 0.85
BRF1-213ENST00000548421 TRGV4A0A0C4DH28 118 aa20.33■□□□□ 0.85
BRF1-213ENST00000548421 D6R8Y8 96 aa20.33■□□□□ 0.85
BRF1-213ENST00000548421 U3KQK5 164 aa20.33■□□□□ 0.85
BRF1-213ENST00000548421 PPBPP02775 128 aa20.32■□□□□ 0.84
BRF1-213ENST00000548421 FHL2Q14192 279 aa20.32■□□□□ 0.84
BRF1-213ENST00000548421 ORMDL3Q8N138 153 aa20.32■□□□□ 0.84
BRF1-213ENST00000548421 SMKR1H3BMG3 65 aa20.31■□□□□ 0.84
BRF1-213ENST00000548421 NCR2O95944 276 aa20.31■□□□□ 0.84
BRF1-213ENST00000548421 GATA1P15976 413 aaPredicted RBP20.31■□□□□ 0.84
BRF1-213ENST00000548421 NANOS2P60321 138 aaKnown RBP20.31■□□□□ 0.84
BRF1-213ENST00000548421 Q6ZSN1 163 aa20.31■□□□□ 0.84
BRF1-213ENST00000548421 EDA2RQ9HAV5 297 aa20.31■□□□□ 0.84
BRF1-213ENST00000548421 H7C1H1 209 aa20.3■□□□□ 0.84
BRF1-213ENST00000548421 PHOX2AO14813 284 aa20.3■□□□□ 0.84
BRF1-213ENST00000548421 M0QY20 66 aa20.3■□□□□ 0.84
BRF1-213ENST00000548421 HOXA5P20719 270 aa20.3■□□□□ 0.84
BRF1-213ENST00000548421 Q6ZTC4 211 aa20.3■□□□□ 0.84
BRF1-213ENST00000548421 GAS8-AS1O95177 125 aa20.29■□□□□ 0.84
BRF1-213ENST00000548421 PRELID3AQ96N28 172 aa20.28■□□□□ 0.84
BRF1-213ENST00000548421 TRBV6-4A0A1B0GX49 114 aa20.27■□□□□ 0.84
BRF1-213ENST00000548421 K7EQD1 137 aa20.27■□□□□ 0.84
BRF1-213ENST00000548421 SRIP30626 198 aa20.27■□□□□ 0.84
BRF1-213ENST00000548421 ALKBH7Q9BT30 221 aaPredicted RBP20.27■□□□□ 0.84
BRF1-213ENST00000548421 HTN3P15516 51 aa20.26■□□□□ 0.83
BRF1-213ENST00000548421 SLC25A29Q8N8R3 303 aa20.26■□□□□ 0.83
BRF1-213ENST00000548421 HHLA3Q9XRX5 114 aa20.26■□□□□ 0.83
BRF1-213ENST00000548421 F5H768 121 aa20.25■□□□□ 0.83
BRF1-213ENST00000548421 PPP1R17O96001 155 aa20.25■□□□□ 0.83
BRF1-213ENST00000548421 NRACQ8N912 160 aa20.25■□□□□ 0.83
BRF1-213ENST00000548421 LAMTOR2Q9Y2Q5 125 aa20.25■□□□□ 0.83
BRF1-213ENST00000548421 C1orf196B1AJZ1 125 aa20.24■□□□□ 0.83
BRF1-213ENST00000548421 RHOHQ15669 191 aa20.24■□□□□ 0.83
BRF1-213ENST00000548421 RPL39LQ96EH5 51 aaKnown RBP20.24■□□□□ 0.83
BRF1-213ENST00000548421 PRO0255Q9UI72 69 aa20.24■□□□□ 0.83
BRF1-213ENST00000548421 P0DMU3 169 aa20.24■□□□□ 0.83
BRF1-213ENST00000548421 FAM231AP0DMU4 169 aa20.24■□□□□ 0.83
BRF1-213ENST00000548421 FAM231CP0DMU5 169 aa20.24■□□□□ 0.83
BRF1-213ENST00000548421 OR10J3Q5JRS4 329 aa20.24■□□□□ 0.83
BRF1-213ENST00000548421 TNFRSF6BO95407 300 aa20.23■□□□□ 0.83
BRF1-213ENST00000548421 NPYP01303 97 aa20.23■□□□□ 0.83
BRF1-213ENST00000548421 CRYBA4P53673 196 aa20.23■□□□□ 0.83
BRF1-213ENST00000548421 NIT2Q9NQR4 276 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms