RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 FAM24BQ8N5W8 94 aa6.24□□□□□ -1.41
VPS29-203ENST00000546588 WFDC9Q8NEX5 89 aa6.24□□□□□ -1.41
VPS29-203ENST00000546588 OR8A1Q8NGG7 326 aa6.24□□□□□ -1.41
VPS29-203ENST00000546588 ZC2HC1AQ96GY0 325 aa6.24□□□□□ -1.41
VPS29-203ENST00000546588 VGLL1Q99990 258 aa6.24□□□□□ -1.41
VPS29-203ENST00000546588 AGPAT4-IT1Q9H0P7 198 aa6.24□□□□□ -1.41
VPS29-203ENST00000546588 NAT8BQ9UHF3 227 aa6.24□□□□□ -1.41
VPS29-203ENST00000546588 LAMTOR2Q9Y2Q5 125 aa6.24□□□□□ -1.41
VPS29-203ENST00000546588 SMIM27A0A1W2PRY6 76 aa6.23□□□□□ -1.41
VPS29-203ENST00000546588 IFITM10A6NMD0 228 aa6.23□□□□□ -1.41
VPS29-203ENST00000546588 H7BYZ3 331 aa6.23□□□□□ -1.41
VPS29-203ENST00000546588 J3KT08 172 aa6.23□□□□□ -1.41
VPS29-203ENST00000546588 GZMBP10144 247 aa6.23□□□□□ -1.41
VPS29-203ENST00000546588 CRIP1P50238 77 aa6.23□□□□□ -1.41
VPS29-203ENST00000546588 Q6AWC8 147 aa6.23□□□□□ -1.41
VPS29-203ENST00000546588 FOXI2Q6ZQN5 318 aa6.23□□□□□ -1.41
VPS29-203ENST00000546588 FER1L6-AS1Q8NA97 138 aa6.23□□□□□ -1.41
VPS29-203ENST00000546588 OR10G8Q8NGN5 311 aa6.23□□□□□ -1.41
VPS29-203ENST00000546588 TMEM18Q96B42 140 aa6.23□□□□□ -1.41
VPS29-203ENST00000546588 NDFIP1Q9BT67 221 aa6.23□□□□□ -1.41
VPS29-203ENST00000546588 IL36BQ9NZH7 164 aa6.23□□□□□ -1.41
VPS29-203ENST00000546588 OR4C46A6NHA9 309 aa6.22□□□□□ -1.41
VPS29-203ENST00000546588 M0R2Z0 102 aa6.22□□□□□ -1.41
VPS29-203ENST00000546588 CMC4P56277 68 aaPredicted RBP6.22□□□□□ -1.41
VPS29-203ENST00000546588 AMTNQ6UX39 209 aa6.22□□□□□ -1.41
VPS29-203ENST00000546588 PRNTQ86SH4 94 aa6.22□□□□□ -1.41
VPS29-203ENST00000546588 ZNF575Q86XF7 245 aa6.22□□□□□ -1.41
VPS29-203ENST00000546588 ZFAND2AQ8N6M9 145 aa6.22□□□□□ -1.41
VPS29-203ENST00000546588 TSKUQ8WUA8 353 aa6.22□□□□□ -1.41
VPS29-203ENST00000546588 TMEM158Q8WZ71 300 aa6.22□□□□□ -1.41
VPS29-203ENST00000546588 ANAPC13Q9BS18 74 aa6.22□□□□□ -1.41
VPS29-203ENST00000546588 GTSF1LQ9H1H1 148 aa6.22□□□□□ -1.41
VPS29-203ENST00000546588 RPP21Q9H633 154 aaKnown RBP6.22□□□□□ -1.41
VPS29-203ENST00000546588 NIPBLQ6KC79 2804 aaeCLIP6.22□□□□□ -1.41
VPS29-203ENST00000546588 ZNF705GA8MUZ8 300 aaPredicted RBP6.21□□□□□ -1.42
VPS29-203ENST00000546588 CRYGDP07320 174 aa6.21□□□□□ -1.42
VPS29-203ENST00000546588 HLA-DRB4P13762 266 aa6.21□□□□□ -1.42
VPS29-203ENST00000546588 FABP4P15090 132 aa6.21□□□□□ -1.42
VPS29-203ENST00000546588 HSD52Q0P140 79 aa6.21□□□□□ -1.42
VPS29-203ENST00000546588 BATFQ16520 125 aa6.21□□□□□ -1.42
VPS29-203ENST00000546588 ODF3L2Q3SX64 289 aa6.21□□□□□ -1.42
VPS29-203ENST00000546588 RASL11AQ6T310 242 aa6.21□□□□□ -1.42
VPS29-203ENST00000546588 GBGT1Q8N5D6 347 aa6.21□□□□□ -1.42
VPS29-203ENST00000546588 GATD1Q8NB37 220 aa6.21□□□□□ -1.42
VPS29-203ENST00000546588 OR10J6PQ8NGY7 276 aa6.21□□□□□ -1.42
VPS29-203ENST00000546588 ZNRF2Q8NHG8 242 aa6.21□□□□□ -1.42
VPS29-203ENST00000546588 Q8TAT8 98 aa6.21□□□□□ -1.42
VPS29-203ENST00000546588 DYNLRB2Q8TF09 96 aa6.21□□□□□ -1.42
VPS29-203ENST00000546588 SGK494Q96LW2 274 aa6.21□□□□□ -1.42
VPS29-203ENST00000546588 CNFNQ9BYD5 112 aa6.21□□□□□ -1.42
VPS29-203ENST00000546588 RNASE7Q9H1E1 156 aaKnown RBP6.21□□□□□ -1.42
VPS29-203ENST00000546588 MAP6D1Q9H9H5 199 aa6.21□□□□□ -1.42
VPS29-203ENST00000546588 HLA-DRB4X5D2U9 266 aa6.21□□□□□ -1.42
VPS29-203ENST00000546588 FBN1P35555 2871 aaKnown RBP6.21□□□□□ -1.42
VPS29-203ENST00000546588 TEP1Q99973 2627 aaKnown RBP6.2□□□□□ -1.42
VPS29-203ENST00000546588 LOC102724200A0A096LPH7 203 aaPredicted RBP6.2□□□□□ -1.42
VPS29-203ENST00000546588 A0A1B0GX51 115 aa6.2□□□□□ -1.42
VPS29-203ENST00000546588 GAGE12JA6NER3 117 aa6.2□□□□□ -1.42
VPS29-203ENST00000546588 GAGE7O76087 117 aa6.2□□□□□ -1.42
VPS29-203ENST00000546588 DUSP14O95147 198 aaKnown RBP6.2□□□□□ -1.42
VPS29-203ENST00000546588 ZNF688P0C7X2 276 aa6.2□□□□□ -1.42
VPS29-203ENST00000546588 GAGE12FP0CL80 117 aa6.2□□□□□ -1.42
VPS29-203ENST00000546588 GAGE12GP0CL81 117 aa6.2□□□□□ -1.42
VPS29-203ENST00000546588 GAGE12IP0CL82 117 aa6.2□□□□□ -1.42
VPS29-203ENST00000546588 CT45A10P0DMU9 189 aa6.2□□□□□ -1.42
VPS29-203ENST00000546588 EVI2AP22794 236 aa6.2□□□□□ -1.42
VPS29-203ENST00000546588 ZNF80P51504 273 aaPredicted RBP6.2□□□□□ -1.42
VPS29-203ENST00000546588 EMP1P54849 157 aa6.2□□□□□ -1.42
VPS29-203ENST00000546588 HIST1H1AQ02539 215 aaPredicted RBP6.2□□□□□ -1.42
VPS29-203ENST00000546588 GAGE4Q13068 117 aa6.2□□□□□ -1.42
VPS29-203ENST00000546588 NSUN5P1Q3KNT7 163 aa6.2□□□□□ -1.42
VPS29-203ENST00000546588 TDRG1Q3Y452 100 aa6.2□□□□□ -1.42
VPS29-203ENST00000546588 GDF5OSQ5U4N7 250 aa6.2□□□□□ -1.42
VPS29-203ENST00000546588 C12orf54Q6X4T0 127 aa6.2□□□□□ -1.42
VPS29-203ENST00000546588 ATP5L2Q7Z4Y8 100 aa6.2□□□□□ -1.42
VPS29-203ENST00000546588 FAM19A5Q7Z5A7 132 aaPredicted RBP6.2□□□□□ -1.42
VPS29-203ENST00000546588 AGRNO00468 2067 aa6.2□□□□□ -1.42
VPS29-203ENST00000546588 ANK2Q01484 3957 aa6.2□□□□□ -1.42
VPS29-203ENST00000546588 TENM1Q9UKZ4 2725 aa6.19□□□□□ -1.42
VPS29-203ENST00000546588 IZUMO1RA6ND01 250 aa6.19□□□□□ -1.42
VPS29-203ENST00000546588 FABP5P3A8MUU1 101 aa6.19□□□□□ -1.42
VPS29-203ENST00000546588 A8MWL6 223 aa6.19□□□□□ -1.42
VPS29-203ENST00000546588 H3BMM0 161 aa6.19□□□□□ -1.42
VPS29-203ENST00000546588 SH2D1AO60880 128 aa6.19□□□□□ -1.42
VPS29-203ENST00000546588 P01737 135 aa6.19□□□□□ -1.42
VPS29-203ENST00000546588 IGLC6P0CF74 106 aa6.19□□□□□ -1.42
VPS29-203ENST00000546588 MGST1P10620 155 aaKnown RBP6.19□□□□□ -1.42
VPS29-203ENST00000546588 CTRLP40313 264 aa6.19□□□□□ -1.42
VPS29-203ENST00000546588 RPL13AP40429 203 aaKnown RBP6.19□□□□□ -1.42
VPS29-203ENST00000546588 ERCC8Q13216 396 aa6.19□□□□□ -1.42
VPS29-203ENST00000546588 PSMG4Q5JS54 123 aa6.19□□□□□ -1.42
VPS29-203ENST00000546588 PIK3CD-AS1Q5SR53 167 aa6.19□□□□□ -1.42
VPS29-203ENST00000546588 PRR9Q5T870 116 aa6.19□□□□□ -1.42
VPS29-203ENST00000546588 C9orf66Q5T8R8 295 aa6.19□□□□□ -1.42
VPS29-203ENST00000546588 OR5A1Q8NGJ0 315 aa6.19□□□□□ -1.42
VPS29-203ENST00000546588 LINC00467Q9BRT7 94 aa6.19□□□□□ -1.42
VPS29-203ENST00000546588 TP53TG3Q9ULZ0 132 aa6.19□□□□□ -1.42
VPS29-203ENST00000546588 CMYA5Q8N3K9 4069 aa6.19□□□□□ -1.42
VPS29-203ENST00000546588 TRAV21A0A0B4J279 112 aa6.18□□□□□ -1.42
VPS29-203ENST00000546588 A0A1B0GXF2 115 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms