RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 SPANXDQ9BXN6 97 aa4.85□□□□□ -1.63
SNHG1-225ENST00000545920 TTTY13Q9BZ97 58 aa4.85□□□□□ -1.63
SNHG1-225ENST00000545920 MDFICQ9P1T7 246 aa4.85□□□□□ -1.63
SNHG1-225ENST00000545920 USP34Q70CQ2 3546 aa4.84□□□□□ -1.63
SNHG1-225ENST00000545920 IGLV4-69A0A075B6H9 119 aa4.84□□□□□ -1.63
SNHG1-225ENST00000545920 TRGV11A0A075B6L2 103 aa4.84□□□□□ -1.63
SNHG1-225ENST00000545920 IGHV3-35A0A0C4DH35 117 aa4.84□□□□□ -1.63
SNHG1-225ENST00000545920 KRTAP23-1A1A580 65 aa4.84□□□□□ -1.63
SNHG1-225ENST00000545920 A6NDX4 124 aa4.84□□□□□ -1.63
SNHG1-225ENST00000545920 A8MWV9 139 aa4.84□□□□□ -1.63
SNHG1-225ENST00000545920 TSPAN13O95857 204 aa4.84□□□□□ -1.63
SNHG1-225ENST00000545920 LGALS3P17931 250 aaKnown RBP4.84□□□□□ -1.63
SNHG1-225ENST00000545920 SNRPD3P62318 126 aaKnown RBP4.84□□□□□ -1.63
SNHG1-225ENST00000545920 SMAGPQ0VAQ4 97 aa4.84□□□□□ -1.63
SNHG1-225ENST00000545920 RPL39LQ96EH5 51 aaKnown RBP4.84□□□□□ -1.63
SNHG1-225ENST00000545920 PIMREGQ9BSJ6 248 aa4.84□□□□□ -1.63
SNHG1-225ENST00000545920 RHPN1-AS1Q9BWJ2 59 aa4.84□□□□□ -1.63
SNHG1-225ENST00000545920 PRO1854Q9UHT4 67 aa4.84□□□□□ -1.63
SNHG1-225ENST00000545920 TP53TG1Q9Y2A0 90 aa4.84□□□□□ -1.63
SNHG1-225ENST00000545920 ZNF256Q9Y2P7 627 aaPredicted RBP4.84□□□□□ -1.63
SNHG1-225ENST00000545920 PYGO1Q9Y3Y4 419 aa4.84□□□□□ -1.63
SNHG1-225ENST00000545920 ZNF318Q5VUA4 2279 aa4.83□□□□□ -1.64
SNHG1-225ENST00000545920 IGHV3OR16-8A0A075B7F1 116 aa4.83□□□□□ -1.64
SNHG1-225ENST00000545920 IGHV3-66A0A0C4DH42 116 aa4.83□□□□□ -1.64
SNHG1-225ENST00000545920 J3QQQ9 107 aa4.83□□□□□ -1.64
SNHG1-225ENST00000545920 LY6HO94772 140 aa4.83□□□□□ -1.64
SNHG1-225ENST00000545920 IGHV3-30P01768 117 aa4.83□□□□□ -1.64
SNHG1-225ENST00000545920 CRYGDP07320 174 aa4.83□□□□□ -1.64
SNHG1-225ENST00000545920 IGHV3-30-5P0DP03 117 aa4.83□□□□□ -1.64
SNHG1-225ENST00000545920 SUMO4Q6EEV6 95 aa4.83□□□□□ -1.64
SNHG1-225ENST00000545920 ZNF418Q8TF45 676 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-225ENST00000545920 POLEQ07864 2286 aa4.83□□□□□ -1.64
SNHG1-225ENST00000545920 PKDREJQ9NTG1 2253 aa4.83□□□□□ -1.64
SNHG1-225ENST00000545920 TRAV2A0A0B4J234 112 aa4.82□□□□□ -1.64
SNHG1-225ENST00000545920 I3L3M4 83 aa4.82□□□□□ -1.64
SNHG1-225ENST00000545920 DSCR9P59020 149 aa4.82□□□□□ -1.64
SNHG1-225ENST00000545920 CFHR3Q02985 330 aa4.82□□□□□ -1.64
SNHG1-225ENST00000545920 MRPL23Q16540 153 aaKnown RBP4.82□□□□□ -1.64
SNHG1-225ENST00000545920 COPS9Q8WXC6 57 aa4.82□□□□□ -1.64
SNHG1-225ENST00000545920 BPESC1Q9GZL8 116 aa4.82□□□□□ -1.64
SNHG1-225ENST00000545920 GTSF1LQ9H1H1 148 aa4.82□□□□□ -1.64
SNHG1-225ENST00000545920 IGHV1OR15-1A0A075B7D0 117 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 IGHV3OR16-13A0A075B7E8 117 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 IGHV3-74A0A0B4J1X5 117 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 IGHV3-16A0A0C4DH30 117 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 LOC107984156A0A0G2JMH3 177 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 A0A0J9YXY3 114 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 TMEM223A0PJW6 202 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 LINC01548A6NM66 108 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 M0QY20 66 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 SPRY2O43597 315 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 TIMM17BO60830 172 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 TSHBP01222 138 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 ZNF688P0C7X2 276 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 CFC1BP0CG36 223 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 CFC1P0CG37 223 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 SCGB1C2P0DMR2 95 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 IFITM1P13164 125 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 PSMB2P49721 201 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 ATXN8Q156A1 80 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 BEAN1Q3B7T3 259 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 TMEM170BQ5T4T1 132 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 UNQ9165/PRO28630Q6UXU0 137 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 SH2D6Q7Z4S9 175 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 ARL17AQ8IVW1 177 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 C20orf203Q8NBC4 194 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 DCANP1Q8TF63 244 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 LINC00467Q9BRT7 94 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 KLK15Q9H2R5 256 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 PPDPFQ9H3Y8 114 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 UBTD1Q9HAC8 227 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 YAE1D1Q9NRH1 226 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 BEX4Q9NWD9 120 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-225ENST00000545920 ERG28Q9UKR5 140 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 ROS1P08922 2347 aa4.81□□□□□ -1.64
SNHG1-225ENST00000545920 ANKHD1Q8IWZ3 2542 aaKnown RBP4.81□□□□□ -1.64
SNHG1-225ENST00000545920 IGHV3-49A0A0A0MS15 119 aa4.8□□□□□ -1.64
SNHG1-225ENST00000545920 TRBV30A0A0K0K1B3 111 aa4.8□□□□□ -1.64
SNHG1-225ENST00000545920 A8MTW9 85 aa4.8□□□□□ -1.64
SNHG1-225ENST00000545920 M0R2P5 195 aa4.8□□□□□ -1.64
SNHG1-225ENST00000545920 GNRH2O43555 120 aa4.8□□□□□ -1.64
SNHG1-225ENST00000545920 IGHV3-33P01772 117 aa4.8□□□□□ -1.64
SNHG1-225ENST00000545920 PRB4P10163 310 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-225ENST00000545920 RPL13AP40429 203 aaKnown RBP4.8□□□□□ -1.64
SNHG1-225ENST00000545920 CKS1BP61024 79 aa4.8□□□□□ -1.64
SNHG1-225ENST00000545920 Q6Q795 121 aa4.8□□□□□ -1.64
SNHG1-225ENST00000545920 AMTNQ6UX39 209 aa4.8□□□□□ -1.64
SNHG1-225ENST00000545920 DNAJC30Q96LL9 226 aa4.8□□□□□ -1.64
SNHG1-225ENST00000545920 AMELXQ99217 191 aa4.8□□□□□ -1.64
SNHG1-225ENST00000545920 SPANXCQ9NY87 97 aa4.8□□□□□ -1.64
SNHG1-225ENST00000545920 WDFY3Q8IZQ1 3526 aa4.8□□□□□ -1.64
SNHG1-225ENST00000545920 PRUNE2Q8WUY3 3088 aa4.79□□□□□ -1.64
SNHG1-225ENST00000545920 H3BT86 120 aa4.79□□□□□ -1.64
SNHG1-225ENST00000545920 J3QLI3 93 aa4.79□□□□□ -1.64
SNHG1-225ENST00000545920 K7EQG2 157 aa4.79□□□□□ -1.64
SNHG1-225ENST00000545920 RHODO00212 210 aa4.79□□□□□ -1.64
SNHG1-225ENST00000545920 TCL1BO95988 128 aa4.79□□□□□ -1.64
SNHG1-225ENST00000545920 COX6CP09669 75 aa4.79□□□□□ -1.64
SNHG1-225ENST00000545920 PSMB8P28062 276 aa4.79□□□□□ -1.64
SNHG1-225ENST00000545920 MRPS36P82909 103 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms