RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 HLA-DRB4X5D2U9 266 aa6.62□□□□□ -1.35
CCDC7-210ENST00000545067 LINC01549A6NIU2 74 aa6.62□□□□□ -1.35
CCDC7-210ENST00000545067 VCYO14598 125 aa6.62□□□□□ -1.35
CCDC7-210ENST00000545067 CD28P10747 220 aa6.62□□□□□ -1.35
CCDC7-210ENST00000545067 C2orf91Q6ZV80 131 aa6.62□□□□□ -1.35
CCDC7-210ENST00000545067 A0A087WX48 190 aa6.61□□□□□ -1.35
CCDC7-210ENST00000545067 A0A096LNJ9 63 aa6.61□□□□□ -1.35
CCDC7-210ENST00000545067 GAGE13Q4V321 117 aa6.61□□□□□ -1.35
CCDC7-210ENST00000545067 Q8N6K4 173 aa6.61□□□□□ -1.35
CCDC7-210ENST00000545067 OR5A1Q8NGJ0 315 aa6.61□□□□□ -1.35
CCDC7-210ENST00000545067 SH2D6Q7Z4S9 175 aa6.61□□□□□ -1.35
CCDC7-210ENST00000545067 OPRPNQ99935 248 aaPredicted RBP6.61□□□□□ -1.35
CCDC7-210ENST00000545067 K7EP34 96 aa6.61□□□□□ -1.35
CCDC7-210ENST00000545067 TCTEX1D4Q5JR98 221 aa6.61□□□□□ -1.35
CCDC7-210ENST00000545067 ZNF48Q96MX3 618 aaPredicted RBP6.61□□□□□ -1.35
CCDC7-210ENST00000545067 CLPSL1A2RUU4 121 aa6.6□□□□□ -1.35
CCDC7-210ENST00000545067 RBAKDNA6NC62 111 aa6.6□□□□□ -1.35
CCDC7-210ENST00000545067 FLNCQ14315 2725 aa6.6□□□□□ -1.35
CCDC7-210ENST00000545067 EBI3Q14213 229 aa6.6□□□□□ -1.35
CCDC7-210ENST00000545067 C9orf47Q6ZRZ4 202 aa6.6□□□□□ -1.35
CCDC7-210ENST00000545067 CEND1Q8N111 149 aa6.6□□□□□ -1.35
CCDC7-210ENST00000545067 GATD1Q8NB37 220 aa6.6□□□□□ -1.35
CCDC7-210ENST00000545067 TMEM190Q8WZ59 177 aa6.6□□□□□ -1.35
CCDC7-210ENST00000545067 ZNF625Q96I27 306 aaPredicted RBP6.6□□□□□ -1.35
CCDC7-210ENST00000545067 MDFICQ9P1T7 246 aa6.6□□□□□ -1.35
CCDC7-210ENST00000545067 XCL2Q9UBD3 114 aa6.6□□□□□ -1.35
CCDC7-210ENST00000545067 MYMXA0A1B0GTQ4 84 aa6.6□□□□□ -1.35
CCDC7-210ENST00000545067 IGHG4P01861 327 aa6.6□□□□□ -1.35
CCDC7-210ENST00000545067 FGF6P10767 208 aa6.6□□□□□ -1.35
CCDC7-210ENST00000545067 PAX2Q02962 417 aa6.6□□□□□ -1.35
CCDC7-210ENST00000545067 MAPKAPK5-AS1Q8N8E1 139 aa6.6□□□□□ -1.35
CCDC7-210ENST00000545067 C10orf105Q8TEF2 133 aa6.6□□□□□ -1.35
CCDC7-210ENST00000545067 PRM2P04554 102 aa6.6□□□□□ -1.35
CCDC7-210ENST00000545067 LYRM7Q5U5X0 104 aa6.6□□□□□ -1.35
CCDC7-210ENST00000545067 C12orf74Q32Q52 190 aa6.59□□□□□ -1.35
CCDC7-210ENST00000545067 TEX48A0A1B0GUV7 120 aa6.59□□□□□ -1.35
CCDC7-210ENST00000545067 WFDC2Q14508 124 aa6.59□□□□□ -1.36
CCDC7-210ENST00000545067 SUMO4Q6EEV6 95 aa6.59□□□□□ -1.36
CCDC7-210ENST00000545067 CDKN1BP46527 198 aa6.58□□□□□ -1.36
CCDC7-210ENST00000545067 SLURP1P55000 103 aa6.58□□□□□ -1.36
CCDC7-210ENST00000545067 IGHV1OR15-1A0A075B7D0 117 aa6.58□□□□□ -1.36
CCDC7-210ENST00000545067 HOXD3P31249 432 aaPredicted RBP6.58□□□□□ -1.36
CCDC7-210ENST00000545067 LINC01356Q8N9X3 169 aa6.58□□□□□ -1.36
CCDC7-210ENST00000545067 RASL10AQ92737 203 aa6.58□□□□□ -1.36
CCDC7-210ENST00000545067 COL27A1Q8IZC6 1860 aaPredicted RBP6.58□□□□□ -1.36
CCDC7-210ENST00000545067 AVPP01185 164 aa6.58□□□□□ -1.36
CCDC7-210ENST00000545067 IGHG2P01859 326 aa6.58□□□□□ -1.36
CCDC7-210ENST00000545067 APRG1Q8IVJ8 170 aa6.58□□□□□ -1.36
CCDC7-210ENST00000545067 Q8N1Y9 231 aa6.58□□□□□ -1.36
CCDC7-210ENST00000545067 ZFAND2AQ8N6M9 145 aa6.58□□□□□ -1.36
CCDC7-210ENST00000545067 TOMM7Q9P0U1 55 aa6.58□□□□□ -1.36
CCDC7-210ENST00000545067 PMVKQ15126 192 aa6.57□□□□□ -1.36
CCDC7-210ENST00000545067 CSMD1Q96PZ7 3565 aa6.57□□□□□ -1.36
CCDC7-210ENST00000545067 TRGV1A0A0A0MS02 117 aa6.57□□□□□ -1.36
CCDC7-210ENST00000545067 CFHR3Q02985 330 aa6.57□□□□□ -1.36
CCDC7-210ENST00000545067 MEIG1Q5JSS6 88 aa6.57□□□□□ -1.36
CCDC7-210ENST00000545067 SAMD13Q5VXD3 122 aa6.57□□□□□ -1.36
CCDC7-210ENST00000545067 TSSC4Q9Y5U2 329 aaPredicted RBP6.57□□□□□ -1.36
CCDC7-210ENST00000545067 U3KQK5 164 aa6.57□□□□□ -1.36
CCDC7-210ENST00000545067 IGHV4OR15-8A0A075B7B6 117 aa6.56□□□□□ -1.36
CCDC7-210ENST00000545067 A0A087WW49 117 aa6.56□□□□□ -1.36
CCDC7-210ENST00000545067 C11orf86A6NJI1 115 aa6.56□□□□□ -1.36
CCDC7-210ENST00000545067 NDUFS8O00217 210 aa6.56□□□□□ -1.36
CCDC7-210ENST00000545067 BAALCQ8WXS3 180 aa6.56□□□□□ -1.36
CCDC7-210ENST00000545067 SIVA1O15304 175 aa6.56□□□□□ -1.36
CCDC7-210ENST00000545067 P0DMU3 169 aa6.56□□□□□ -1.36
CCDC7-210ENST00000545067 FAM231AP0DMU4 169 aa6.56□□□□□ -1.36
CCDC7-210ENST00000545067 FAM231CP0DMU5 169 aa6.56□□□□□ -1.36
CCDC7-210ENST00000545067 RBX1P62877 108 aa6.56□□□□□ -1.36
CCDC7-210ENST00000545067 PAPPA-AS1Q5QFB9 102 aa6.56□□□□□ -1.36
CCDC7-210ENST00000545067 CEMP1Q6PRD7 247 aaPredicted RBP6.56□□□□□ -1.36
CCDC7-210ENST00000545067 ZFP2Q6ZN57 461 aa6.56□□□□□ -1.36
CCDC7-210ENST00000545067 STHQ8IWL8 128 aa6.56□□□□□ -1.36
CCDC7-210ENST00000545067 MRPL53Q96EL3 112 aaKnown RBP6.56□□□□□ -1.36
CCDC7-210ENST00000545067 C20orf78Q9BR46 151 aa6.56□□□□□ -1.36
CCDC7-210ENST00000545067 TRGV2A0A075B6R0 118 aa6.56□□□□□ -1.36
CCDC7-210ENST00000545067 IGLL5B9A064 214 aa6.56□□□□□ -1.36
CCDC7-210ENST00000545067 RRN3P1Q2M238 152 aa6.56□□□□□ -1.36
CCDC7-210ENST00000545067 TRGV11A0A075B6L2 103 aa6.55□□□□□ -1.36
CCDC7-210ENST00000545067 TRAV13-1A0A0B4J241 112 aa6.55□□□□□ -1.36
CCDC7-210ENST00000545067 A0A0J9YXV3 536 aa6.55□□□□□ -1.36
CCDC7-210ENST00000545067 NRACQ8N912 160 aa6.55□□□□□ -1.36
CCDC7-210ENST00000545067 RPL35AP18077 110 aaKnown RBP6.55□□□□□ -1.36
CCDC7-210ENST00000545067 A6NDX4 124 aa6.55□□□□□ -1.36
CCDC7-210ENST00000545067 Q5PR19 223 aa6.55□□□□□ -1.36
CCDC7-210ENST00000545067 Q96MF0 132 aa6.55□□□□□ -1.36
CCDC7-210ENST00000545067 LENEPQ9Y5L5 61 aa6.55□□□□□ -1.36
CCDC7-210ENST00000545067 SIGMAR1Q99720 223 aa6.54□□□□□ -1.36
CCDC7-210ENST00000545067 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.54□□□□□ -1.36
CCDC7-210ENST00000545067 IGKV2-29A2NJV5 120 aaPredicted RBP6.54□□□□□ -1.36
CCDC7-210ENST00000545067 J3QQQ9 107 aa6.54□□□□□ -1.36
CCDC7-210ENST00000545067 PLEKHB2Q96CS7 222 aa6.54□□□□□ -1.36
CCDC7-210ENST00000545067 UBE2L6O14933 153 aa6.54□□□□□ -1.36
CCDC7-210ENST00000545067 TRPT1Q86TN4 253 aaKnown RBP6.54□□□□□ -1.36
CCDC7-210ENST00000545067 DLX4Q92988 240 aaPredicted RBP6.54□□□□□ -1.36
CCDC7-210ENST00000545067 PEMTQ9UBM1 199 aa6.54□□□□□ -1.36
CCDC7-210ENST00000545067 ERG28Q9UKR5 140 aa6.54□□□□□ -1.36
CCDC7-210ENST00000545067 NSUN5P1Q3KNT7 163 aa6.53□□□□□ -1.36
CCDC7-210ENST00000545067 YAE1D1Q9NRH1 226 aa6.53□□□□□ -1.36
CCDC7-210ENST00000545067 HHLA3Q9XRX5 114 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms