RNA–Protein interactions for RNA: ENST00000544754.1

LMO3-231, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-231ENST00000544754 RPS10P46783 165 aaKnown RBP8.9□□□□□ -0.98
LMO3-231ENST00000544754 SMIM15Q7Z3B0 74 aa8.9□□□□□ -0.98
LMO3-231ENST00000544754 LINC00612Q8N6U2 182 aa8.9□□□□□ -0.98
LMO3-231ENST00000544754 C14orf178Q8N769 122 aaPredicted RBP8.9□□□□□ -0.98
LMO3-231ENST00000544754 NDUFAF3Q9BU61 184 aa8.9□□□□□ -0.98
LMO3-231ENST00000544754 SAMD10Q9BYL1 202 aa8.9□□□□□ -0.98
LMO3-231ENST00000544754 C11orf68Q9H3H3 251 aaKnown RBP8.9□□□□□ -0.98
LMO3-231ENST00000544754 DKK2Q9UBU2 259 aa8.9□□□□□ -0.98
LMO3-231ENST00000544754 CELA1Q9UNI1 258 aa8.9□□□□□ -0.98
LMO3-231ENST00000544754 KIF25-AS1Q9Y6Z4 181 aa8.9□□□□□ -0.98
LMO3-231ENST00000544754 A0A087WWL8 130 aa8.89□□□□□ -0.99
LMO3-231ENST00000544754 A8MWV9 139 aa8.89□□□□□ -0.99
LMO3-231ENST00000544754 MT-ND6P03923 174 aa8.89□□□□□ -0.99
LMO3-231ENST00000544754 CRYGDP07320 174 aa8.89□□□□□ -0.99
LMO3-231ENST00000544754 CFAP126Q5VTH2 177 aa8.89□□□□□ -0.99
LMO3-231ENST00000544754 AMN1Q8IY45 258 aa8.89□□□□□ -0.99
LMO3-231ENST00000544754 POM121L12Q8N7R1 296 aa8.89□□□□□ -0.99
LMO3-231ENST00000544754 DPH3P1Q9H4G8 78 aa8.89□□□□□ -0.99
LMO3-231ENST00000544754 A0A0J9YWU9 116 aa8.88□□□□□ -0.99
LMO3-231ENST00000544754 LCE2BO14633 110 aa8.88□□□□□ -0.99
LMO3-231ENST00000544754 SPART-AS1P0CW21 52 aa8.88□□□□□ -0.99
LMO3-231ENST00000544754 DEFB130BP0DP73 79 aa8.88□□□□□ -0.99
LMO3-231ENST00000544754 DEFB130AP0DP74 79 aa8.88□□□□□ -0.99
LMO3-231ENST00000544754 LINC00315P59091 139 aa8.88□□□□□ -0.99
LMO3-231ENST00000544754 SLAQ13239 276 aa8.88□□□□□ -0.99
LMO3-231ENST00000544754 FAM74A4Q5TZK3 123 aa8.88□□□□□ -0.99
LMO3-231ENST00000544754 FAM104BQ5XKR9 115 aa8.88□□□□□ -0.99
LMO3-231ENST00000544754 RNF185Q96GF1 192 aa8.88□□□□□ -0.99
LMO3-231ENST00000544754 MRPL18Q9H0U6 180 aaKnown RBP8.88□□□□□ -0.99
LMO3-231ENST00000544754 TRAPPC1Q9Y5R8 145 aa8.88□□□□□ -0.99
LMO3-231ENST00000544754 MEGF8Q7Z7M0 2845 aa8.88□□□□□ -0.99
LMO3-231ENST00000544754 TRGV2A0A075B6R0 118 aa8.87□□□□□ -0.99
LMO3-231ENST00000544754 TRAV4A0A0B4J268 109 aa8.87□□□□□ -0.99
LMO3-231ENST00000544754 MGPP08493 103 aa8.87□□□□□ -0.99
LMO3-231ENST00000544754 SMIM17P0DL12 118 aa8.87□□□□□ -0.99
LMO3-231ENST00000544754 RAB4AP20338 218 aa8.87□□□□□ -0.99
LMO3-231ENST00000544754 FABP9Q0Z7S8 132 aa8.87□□□□□ -0.99
LMO3-231ENST00000544754 UFSP1Q6NVU6 142 aa8.87□□□□□ -0.99
LMO3-231ENST00000544754 OR4C5Q8NGB2 326 aa8.87□□□□□ -0.99
LMO3-231ENST00000544754 FRZBQ92765 325 aa8.87□□□□□ -0.99
LMO3-231ENST00000544754 IGHV3-73A0A0B4J1V6 119 aa8.86□□□□□ -0.99
LMO3-231ENST00000544754 TEX48A0A1B0GUV7 120 aa8.86□□□□□ -0.99
LMO3-231ENST00000544754 IGHV3-53P01767 116 aa8.86□□□□□ -0.99
LMO3-231ENST00000544754 APCSP02743 223 aa8.86□□□□□ -0.99
LMO3-231ENST00000544754 TRGC2P03986 189 aa8.86□□□□□ -0.99
LMO3-231ENST00000544754 DAD1P61803 113 aa8.86□□□□□ -0.99
LMO3-231ENST00000544754 KIAA1644Q3SXP7 199 aa8.86□□□□□ -0.99
LMO3-231ENST00000544754 MRPL51Q4U2R6 128 aaKnown RBP8.86□□□□□ -0.99
LMO3-231ENST00000544754 ZNF479Q96JC4 524 aa8.86□□□□□ -0.99
LMO3-231ENST00000544754 C18orf15Q96N68 181 aa8.86□□□□□ -0.99
LMO3-231ENST00000544754 RHODO00212 210 aa8.85□□□□□ -0.99
LMO3-231ENST00000544754 NHLRC4P0CG21 123 aaPredicted RBP8.85□□□□□ -0.99
LMO3-231ENST00000544754 ZNF56Q15929 161 aa8.85□□□□□ -0.99
LMO3-231ENST00000544754 ZFP2Q6ZN57 461 aa8.85□□□□□ -0.99
LMO3-231ENST00000544754 TRAV26-2A0A0B4J265 109 aa8.84□□□□□ -0.99
LMO3-231ENST00000544754 F5H697 171 aa8.84□□□□□ -0.99
LMO3-231ENST00000544754 SMKR1H3BMG3 65 aa8.84□□□□□ -0.99
LMO3-231ENST00000544754 PHOX2AO14813 284 aa8.84□□□□□ -0.99
LMO3-231ENST00000544754 GAS8-AS1O95177 125 aa8.84□□□□□ -0.99
LMO3-231ENST00000544754 C12orf74Q32Q52 190 aa8.84□□□□□ -0.99
LMO3-231ENST00000544754 CIDEAO60543 219 aa8.83□□□□□ -1
LMO3-231ENST00000544754 NCR2O95944 276 aa8.83□□□□□ -1
LMO3-231ENST00000544754 SUMO4Q6EEV6 95 aa8.83□□□□□ -1
LMO3-231ENST00000544754 Q6ZSN1 163 aa8.83□□□□□ -1
LMO3-231ENST00000544754 MRAP2Q96G30 205 aa8.83□□□□□ -1
LMO3-231ENST00000544754 U3KQK5 164 aa8.83□□□□□ -1
LMO3-231ENST00000544754 D6R8Y8 96 aa8.82□□□□□ -1
LMO3-231ENST00000544754 GATA1P15976 413 aaPredicted RBP8.82□□□□□ -1
LMO3-231ENST00000544754 CKS2P33552 79 aa8.82□□□□□ -1
LMO3-231ENST00000544754 FHL2Q14192 279 aa8.82□□□□□ -1
LMO3-231ENST00000544754 C11orf45Q8TAV5 145 aa8.82□□□□□ -1
LMO3-231ENST00000544754 TRGV4A0A0C4DH28 118 aa8.81□□□□□ -1
LMO3-231ENST00000544754 PPBPP02775 128 aa8.81□□□□□ -1
LMO3-231ENST00000544754 ATP5G1P05496 136 aa8.81□□□□□ -1
LMO3-231ENST00000544754 HOXA5P20719 270 aa8.81□□□□□ -1
LMO3-231ENST00000544754 SRIP30626 198 aa8.81□□□□□ -1
LMO3-231ENST00000544754 NANOS2P60321 138 aaKnown RBP8.81□□□□□ -1
LMO3-231ENST00000544754 ORMDL3Q8N138 153 aa8.81□□□□□ -1
LMO3-231ENST00000544754 PRELID3AQ96N28 172 aa8.81□□□□□ -1
LMO3-231ENST00000544754 ALKBH7Q9BT30 221 aaPredicted RBP8.81□□□□□ -1
LMO3-231ENST00000544754 C1orf196B1AJZ1 125 aa8.8□□□□□ -1
LMO3-231ENST00000544754 M0QY20 66 aa8.8□□□□□ -1
LMO3-231ENST00000544754 NPYP01303 97 aa8.8□□□□□ -1
LMO3-231ENST00000544754 Q6ZTC4 211 aa8.8□□□□□ -1
LMO3-231ENST00000544754 NRACQ8N912 160 aa8.8□□□□□ -1
LMO3-231ENST00000544754 RPL39LQ96EH5 51 aaKnown RBP8.8□□□□□ -1
LMO3-231ENST00000544754 EDA2RQ9HAV5 297 aa8.8□□□□□ -1
LMO3-231ENST00000544754 COL7A1Q02388 2944 aa8.79□□□□□ -1
LMO3-231ENST00000544754 H7C1H1 209 aa8.79□□□□□ -1
LMO3-231ENST00000544754 K7EQD1 137 aa8.79□□□□□ -1
LMO3-231ENST00000544754 P0DMU3 169 aa8.79□□□□□ -1
LMO3-231ENST00000544754 FAM231AP0DMU4 169 aa8.79□□□□□ -1
LMO3-231ENST00000544754 FAM231CP0DMU5 169 aa8.79□□□□□ -1
LMO3-231ENST00000544754 HTN3P15516 51 aa8.79□□□□□ -1
LMO3-231ENST00000544754 STAB2Q8WWQ8 2551 aa8.79□□□□□ -1
LMO3-231ENST00000544754 TRBV6-4A0A1B0GX49 114 aa8.78□□□□□ -1
LMO3-231ENST00000544754 F5H768 121 aa8.78□□□□□ -1
LMO3-231ENST00000544754 HIST1H2BKO60814 126 aa8.78□□□□□ -1
LMO3-231ENST00000544754 TNFRSF6BO95407 300 aa8.78□□□□□ -1
LMO3-231ENST00000544754 HIST1H2BJP06899 126 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms