RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 OR8J2Q8NGG1 315 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 OR13D1Q8NGV5 346 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 FAM172AQ8WUF8 416 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 BORCS5Q969J3 196 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 SLAMF6Q96DU3 332 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 COX14Q96I36 57 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 SPRR2FQ96RM1 72 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 HIST1H2BLQ99880 126 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 DCSTAMPQ9H295 470 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 BOLA2Q9H3K6 86 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 RNF122Q9H9V4 155 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 DYNLRB1Q9NP97 96 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 ENY2Q9NPA8 101 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 RASL12Q9NYN1 266 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 TAS2R7Q9NYW3 318 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 GLTPQ9NZD2 209 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 NOSIPQ9Y314 301 aaKnown RBP0.37□□□□□ -2.35
YBX3-214ENST00000544501 FAM32AQ9Y421 112 aaKnown RBP0.37□□□□□ -2.35
YBX3-214ENST00000544501 NBDYA0A0U1RRE5 68 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 ZNF736B4DX44 427 aaPredicted RBP0.36□□□□□ -2.35
YBX3-214ENST00000544501 H3BSH0 61 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 H3BUX3 64 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 HMGB3O15347 200 aaKnown RBP0.36□□□□□ -2.35
YBX3-214ENST00000544501 TIMM17BO60830 172 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 BANF1O75531 89 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 SERPINA6P08185 405 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 BAALC-AS2P0C853 105 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 PPIBP23284 216 aaKnown RBP0.36□□□□□ -2.35
YBX3-214ENST00000544501 ERP29P30040 261 aaKnown RBP0.36□□□□□ -2.35
YBX3-214ENST00000544501 SRIP30626 198 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 YPEL3P61236 119 aaPredicted RBP0.36□□□□□ -2.35
YBX3-214ENST00000544501 RPL37AP61513 92 aaKnown RBP0.36□□□□□ -2.35
YBX3-214ENST00000544501 CNBPP62633 177 aaKnown RBP0.36□□□□□ -2.35
YBX3-214ENST00000544501 SPA17Q15506 151 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 ALX1Q15699 326 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 ESRGQ1W209 222 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 C12orf74Q32Q52 190 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 FAM74A1Q5RGS3 127 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 SLC30A7Q8NEW0 376 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 OR2T10Q8NGZ9 312 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 STAG3L4Q8TBR4 150 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 TSLPQ969D9 159 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 BORCS7Q96B45 105 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 MUCL1Q96DR8 90 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 LINC01600Q96MT4 127 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 SIGMAR1Q99720 223 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 PRADC1Q9BSG0 188 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 KIFC1Q9BW19 673 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 PARVGQ9HBI0 331 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 BCL2L10Q9HD36 194 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 IDI2-AS1Q9NZ38 188 aa0.36□□□□□ -2.35
YBX3-214ENST00000544501 SYNE1Q8NF91 8797 aaKnown RBP0.35□□□□□ -2.35
YBX3-214ENST00000544501 TRAV10A0A0B4J240 114 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 TRAV12-1A0A0B4J245 112 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 M0R233 179 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 NCR3O14931 201 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 ZNF682O95780 498 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 IFNA21P01568 189 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 IFNA17P01571 189 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 C1QBP02746 253 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 C8GP07360 202 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 ANP32AP39687 249 aaKnown RBP0.35□□□□□ -2.35
YBX3-214ENST00000544501 DYNLT1P63172 113 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 EIF5AP63241 154 aaKnown RBP0.35□□□□□ -2.35
YBX3-214ENST00000544501 TFAMQ00059 246 aaKnown RBP0.35□□□□□ -2.35
YBX3-214ENST00000544501 EDDM3AQ14507 147 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 TAF1AQ15573 450 aaPredicted RBP0.35□□□□□ -2.35
YBX3-214ENST00000544501 TSNQ15631 228 aaKnown RBP0.35□□□□□ -2.35
YBX3-214ENST00000544501 DEFB136Q30KP8 78 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 C1orf137Q5JT78 98 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 GDF5OSQ5U4N7 250 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 LYRM7Q5U5X0 104 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 C10orf99Q6UWK7 81 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 LCA10Q71F78 164 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 TAC4Q86UU9 113 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 OR2T35Q8NGX2 323 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 OR10J5Q8NHC4 309 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 TMEM254Q8TBM7 123 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 LCN9Q8WX39 176 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 ADAT3Q96EY9 351 aaPredicted RBP0.35□□□□□ -2.35
YBX3-214ENST00000544501 PHB2Q99623 299 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 SELENOSQ9BQE4 189 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 DPH3P1Q9H4G8 78 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 PROK2Q9HC23 129 aa0.35□□□□□ -2.35
YBX3-214ENST00000544501 J3QRK9 145 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 INE1O15225 51 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 NDUFB3O43676 98 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 SERPINA1P01009 418 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 PIRTP0C851 137 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 ATP5G3P48201 142 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 PIGPP57054 158 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 H3F3AP84243 136 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 KRR1Q13601 381 aaKnown RBP0.34□□□□□ -2.36
YBX3-214ENST00000544501 MPV17LQ2QL34 196 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 DEFB135Q30KP9 77 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 LIN52Q52LA3 116 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 TMEM97Q5BJF2 176 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 Q6Q795 121 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 PLPP5Q8NEB5 264 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 OR5D14Q8NGL3 314 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms