RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 DEFB135Q30KP9 77 aa21.91■■□□□ 1.1
CCM2-219ENST00000544363 POM121L12Q8N7R1 296 aa21.91■■□□□ 1.1
CCM2-219ENST00000544363 SMIM9A6NGZ8 99 aa21.91■■□□□ 1.1
CCM2-219ENST00000544363 CRYGDP07320 174 aa21.91■■□□□ 1.1
CCM2-219ENST00000544363 MGPP08493 103 aa21.91■■□□□ 1.1
CCM2-219ENST00000544363 DAZ2Q13117 558 aaKnown RBP21.91■■□□□ 1.1
CCM2-219ENST00000544363 RASL10AQ92737 203 aa21.91■■□□□ 1.1
CCM2-219ENST00000544363 MRAP2Q96G30 205 aa21.91■■□□□ 1.1
CCM2-219ENST00000544363 SAMD10Q9BYL1 202 aa21.91■■□□□ 1.1
CCM2-219ENST00000544363 MRPL16Q9NX20 251 aaKnown RBP21.91■■□□□ 1.1
CCM2-219ENST00000544363 X6R8D5 127 aa21.91■■□□□ 1.1
CCM2-219ENST00000544363 NDUFAF3Q9BU61 184 aa21.9■■□□□ 1.1
CCM2-219ENST00000544363 LOC105371267A0A1B0GV96 52 aa21.89■■□□□ 1.09
CCM2-219ENST00000544363 TRAV26-2A0A0B4J265 109 aa21.88■■□□□ 1.09
CCM2-219ENST00000544363 A8MWV9 139 aa21.88■■□□□ 1.09
CCM2-219ENST00000544363 GAS8-AS1O95177 125 aa21.88■■□□□ 1.09
CCM2-219ENST00000544363 Q6ZWC4 215 aa21.88■■□□□ 1.09
CCM2-219ENST00000544363 FAM74A4Q5TZK3 123 aa21.88■■□□□ 1.09
CCM2-219ENST00000544363 NOP10Q9NPE3 64 aaKnown RBP21.88■■□□□ 1.09
CCM2-219ENST00000544363 LAMTOR2Q9Y2Q5 125 aa21.88■■□□□ 1.09
CCM2-219ENST00000544363 LGALS9BQ3B8N2 356 aa21.87■■□□□ 1.09
CCM2-219ENST00000544363 TRGV1A0A0A0MS02 117 aa21.86■■□□□ 1.09
CCM2-219ENST00000544363 SERF1AO75920 110 aa21.86■■□□□ 1.09
CCM2-219ENST00000544363 NPYP01303 97 aa21.86■■□□□ 1.09
CCM2-219ENST00000544363 GATA1P15976 413 aaPredicted RBP21.86■■□□□ 1.09
CCM2-219ENST00000544363 LINC00310P59036 64 aa21.86■■□□□ 1.09
CCM2-219ENST00000544363 KPRPQ5T749 579 aaPredicted RBP21.86■■□□□ 1.09
CCM2-219ENST00000544363 OVOL2Q9BRP0 275 aa21.86■■□□□ 1.09
CCM2-219ENST00000544363 HIST3H2BBQ8N257 126 aa21.85■■□□□ 1.09
CCM2-219ENST00000544363 RNF183Q96D59 192 aa21.85■■□□□ 1.09
CCM2-219ENST00000544363 NUPR1O60356 82 aa21.84■■□□□ 1.09
CCM2-219ENST00000544363 TNFRSF6BO95407 300 aa21.84■■□□□ 1.09
CCM2-219ENST00000544363 CFAP126Q5VTH2 177 aa21.84■■□□□ 1.09
CCM2-219ENST00000544363 OR11H2Q8NH07 326 aa21.84■■□□□ 1.09
CCM2-219ENST00000544363 F5H697 171 aa21.83■■□□□ 1.08
CCM2-219ENST00000544363 PDZD11Q5EBL8 140 aa21.83■■□□□ 1.08
CCM2-219ENST00000544363 Q6ZTI0 123 aa21.83■■□□□ 1.08
CCM2-219ENST00000544363 NRACQ8N912 160 aa21.83■■□□□ 1.08
CCM2-219ENST00000544363 RS1O15537 224 aa21.82■■□□□ 1.08
CCM2-219ENST00000544363 NIT1Q86X76 327 aa21.82■■□□□ 1.08
CCM2-219ENST00000544363 ESDP10768 282 aa21.81■■□□□ 1.08
CCM2-219ENST00000544363 ZNF56Q15929 161 aa21.81■■□□□ 1.08
CCM2-219ENST00000544363 SUMO4Q6EEV6 95 aa21.81■■□□□ 1.08
CCM2-219ENST00000544363 UFSP1Q6NVU6 142 aa21.81■■□□□ 1.08
CCM2-219ENST00000544363 URB1-AS1Q96HZ7 61 aa21.8■■□□□ 1.08
CCM2-219ENST00000544363 EMP1P54849 157 aa21.79■■□□□ 1.08
CCM2-219ENST00000544363 MAP1LC3AQ9H492 121 aa21.79■■□□□ 1.08
CCM2-219ENST00000544363 LOC389332A0A1B0GUA5 103 aa21.78■■□□□ 1.08
CCM2-219ENST00000544363 RHODO00212 210 aa21.78■■□□□ 1.08
CCM2-219ENST00000544363 IFITM10A6NMD0 228 aa21.77■■□□□ 1.08
CCM2-219ENST00000544363 PRB2P02812 416 aaPredicted RBP21.77■■□□□ 1.08
CCM2-219ENST00000544363 S100A2P29034 98 aa21.77■■□□□ 1.08
CCM2-219ENST00000544363 KRTAP21-3Q3LHN1 58 aa21.77■■□□□ 1.08
CCM2-219ENST00000544363 RNASEKQ6P5S7 137 aaKnown RBP21.77■■□□□ 1.08
CCM2-219ENST00000544363 PRSS3P2Q8NHM4 247 aa21.77■■□□□ 1.08
CCM2-219ENST00000544363 IGHV3-73A0A0B4J1V6 119 aa21.77■■□□□ 1.07
CCM2-219ENST00000544363 PPP1R17O96001 155 aa21.77■■□□□ 1.07
CCM2-219ENST00000544363 LINC00614P0C842 121 aa21.77■■□□□ 1.07
CCM2-219ENST00000544363 MIFP14174 115 aa21.77■■□□□ 1.07
CCM2-219ENST00000544363 RPL39LQ96EH5 51 aaKnown RBP21.77■■□□□ 1.07
CCM2-219ENST00000544363 NACAE9PAV3 2078 aa21.76■■□□□ 1.07
CCM2-219ENST00000544363 IFI27P40305 119 aaPredicted RBP21.76■■□□□ 1.07
CCM2-219ENST00000544363 ZFP2Q6ZN57 461 aa21.76■■□□□ 1.07
CCM2-219ENST00000544363 OR4C5Q8NGB2 326 aa21.76■■□□□ 1.07
CCM2-219ENST00000544363 CHCHD1Q96BP2 118 aaKnown RBP21.76■■□□□ 1.07
CCM2-219ENST00000544363 TP53TG1Q9Y2A0 90 aa21.76■■□□□ 1.07
CCM2-219ENST00000544363 GAGE12BA1L429 117 aa21.75■■□□□ 1.07
CCM2-219ENST00000544363 PRSS47A8MTI9 375 aa21.75■■□□□ 1.07
CCM2-219ENST00000544363 GAGE7O76087 117 aa21.75■■□□□ 1.07
CCM2-219ENST00000544363 GAGE12FP0CL80 117 aa21.75■■□□□ 1.07
CCM2-219ENST00000544363 GAGE12GP0CL81 117 aa21.75■■□□□ 1.07
CCM2-219ENST00000544363 GAGE12IP0CL82 117 aa21.75■■□□□ 1.07
CCM2-219ENST00000544363 TRAV4A0A0B4J268 109 aa21.74■■□□□ 1.07
CCM2-219ENST00000544363 IGHV4-28A0A0C4DH34 117 aa21.74■■□□□ 1.07
CCM2-219ENST00000544363 K7EIL1 84 aa21.74■■□□□ 1.07
CCM2-219ENST00000544363 M0QY20 66 aa21.74■■□□□ 1.07
CCM2-219ENST00000544363 Q8NAQ8 132 aa21.73■■□□□ 1.07
CCM2-219ENST00000544363 FA2HQ7L5A8 372 aa21.73■■□□□ 1.07
CCM2-219ENST00000544363 HIST1H2BLQ99880 126 aa21.73■■□□□ 1.07
CCM2-219ENST00000544363 C20orf78Q9BR46 151 aa21.73■■□□□ 1.07
CCM2-219ENST00000544363 EDA2RQ9HAV5 297 aa21.73■■□□□ 1.07
CCM2-219ENST00000544363 HSBP1O75506 76 aa21.72■■□□□ 1.07
CCM2-219ENST00000544363 NOTCH1P46531 2555 aa21.71■■□□□ 1.07
CCM2-219ENST00000544363 TRGV2A0A075B6R0 118 aa21.71■■□□□ 1.07
CCM2-219ENST00000544363 ZNF479Q96JC4 524 aa21.71■■□□□ 1.07
CCM2-219ENST00000544363 NXT2Q9NPJ8 142 aaKnown RBP21.71■■□□□ 1.07
CCM2-219ENST00000544363 MGAM2Q2M2H8 2515 aa21.7■■□□□ 1.06
CCM2-219ENST00000544363 FABP4P15090 132 aa21.7■■□□□ 1.06
CCM2-219ENST00000544363 SUMO2P61956 95 aaKnown RBP21.7■■□□□ 1.06
CCM2-219ENST00000544363 LINC00612Q8N6U2 182 aa21.7■■□□□ 1.06
CCM2-219ENST00000544363 TMEM18Q96B42 140 aa21.7■■□□□ 1.06
CCM2-219ENST00000544363 NBEAL2Q6ZNJ1 2754 aa21.69■■□□□ 1.06
CCM2-219ENST00000544363 H7C1H1 209 aa21.69■■□□□ 1.06
CCM2-219ENST00000544363 AP5S1Q9NUS5 200 aa21.69■■□□□ 1.06
CCM2-219ENST00000544363 LYRM9A8MSI8 78 aa21.69■■□□□ 1.06
CCM2-219ENST00000544363 Q6ZSN1 163 aa21.69■■□□□ 1.06
CCM2-219ENST00000544363 Q8N8P6 123 aa21.69■■□□□ 1.06
CCM2-219ENST00000544363 IGLV2-18A0A075B6J9 118 aa21.68■■□□□ 1.06
CCM2-219ENST00000544363 IGHV3-53P01767 116 aa21.68■■□□□ 1.06
CCM2-219ENST00000544363 PMCHP20382 165 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms