RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 TRPT1Q86TN4 253 aaKnown RBP17.82■□□□□ 0.44
SHD-201ENST00000543264 C9JAW5 83 aa17.81■□□□□ 0.44
SHD-201ENST00000543264 LGALS3P17931 250 aaKnown RBP17.81■□□□□ 0.44
SHD-201ENST00000543264 CRIP2P52943 208 aaPredicted RBP17.81■□□□□ 0.44
SHD-201ENST00000543264 SUMO4Q6EEV6 95 aa17.81■□□□□ 0.44
SHD-201ENST00000543264 C11orf71Q6IPW1 123 aa17.81■□□□□ 0.44
SHD-201ENST00000543264 TMEM141Q96I45 108 aa17.81■□□□□ 0.44
SHD-201ENST00000543264 ANAPC13Q9BS18 74 aa17.81■□□□□ 0.44
SHD-201ENST00000543264 VCYO14598 125 aa17.81■□□□□ 0.44
SHD-201ENST00000543264 SLC25A20O43772 301 aa17.81■□□□□ 0.44
SHD-201ENST00000543264 IGHV4OR15-8A0A075B7B6 117 aa17.8■□□□□ 0.44
SHD-201ENST00000543264 A0A087WW49 117 aa17.8■□□□□ 0.44
SHD-201ENST00000543264 A4D1N5 150 aa17.8■□□□□ 0.44
SHD-201ENST00000543264 SOCS3O14543 225 aa17.8■□□□□ 0.44
SHD-201ENST00000543264 PTPRZ1P23471 2315 aaPredicted RBP17.8■□□□□ 0.44
SHD-201ENST00000543264 TRAV41A0A0B4J266 112 aa17.8■□□□□ 0.44
SHD-201ENST00000543264 ZFAND6Q6FIF0 208 aa17.8■□□□□ 0.44
SHD-201ENST00000543264 POM121L12Q8N7R1 296 aa17.8■□□□□ 0.44
SHD-201ENST00000543264 C5orf56Q8N8D9 126 aa17.8■□□□□ 0.44
SHD-201ENST00000543264 AMELXQ99217 191 aa17.8■□□□□ 0.44
SHD-201ENST00000543264 CCL21O00585 134 aa17.79■□□□□ 0.44
SHD-201ENST00000543264 SDHAF1A6NFY7 115 aa17.79■□□□□ 0.44
SHD-201ENST00000543264 TMEM262E9PQX1 116 aa17.79■□□□□ 0.44
SHD-201ENST00000543264 FAM19A4Q96LR4 140 aa17.79■□□□□ 0.44
SHD-201ENST00000543264 TCF15Q12870 199 aa17.78■□□□□ 0.44
SHD-201ENST00000543264 ZNF876PQ49A33 203 aa17.78■□□□□ 0.44
SHD-201ENST00000543264 TEX29Q8N6K0 151 aa17.78■□□□□ 0.44
SHD-201ENST00000543264 TIMM17AQ99595 171 aa17.78■□□□□ 0.44
SHD-201ENST00000543264 OPRPNQ99935 248 aaPredicted RBP17.78■□□□□ 0.44
SHD-201ENST00000543264 RPL32P62910 135 aaKnown RBP17.77■□□□□ 0.43
SHD-201ENST00000543264 FBXL19-AS1Q494R0 122 aa17.77■□□□□ 0.43
SHD-201ENST00000543264 ZNF256Q9Y2P7 627 aaPredicted RBP17.77■□□□□ 0.43
SHD-201ENST00000543264 IGHV3-64A0A075B6Q5 118 aa17.76■□□□□ 0.43
SHD-201ENST00000543264 TRAV2A0A0B4J234 112 aa17.76■□□□□ 0.43
SHD-201ENST00000543264 EIF4EBP3O60516 100 aaPredicted RBP17.76■□□□□ 0.43
SHD-201ENST00000543264 FAM223BA6NKX1 122 aa17.75■□□□□ 0.43
SHD-201ENST00000543264 IGHV3-33P01772 117 aa17.75■□□□□ 0.43
SHD-201ENST00000543264 SRD5A1P18405 259 aa17.75■□□□□ 0.43
SHD-201ENST00000543264 FAM74A4Q5TZK3 123 aa17.75■□□□□ 0.43
SHD-201ENST00000543264 FAM159AQ6UWV7 190 aa17.75■□□□□ 0.43
SHD-201ENST00000543264 FAM223AQ8IWN6 122 aa17.75■□□□□ 0.43
SHD-201ENST00000543264 NXPH4O95158 308 aa17.75■□□□□ 0.43
SHD-201ENST00000543264 IGHV3-11P01762 117 aa17.75■□□□□ 0.43
SHD-201ENST00000543264 AKAP6Q13023 2319 aa17.74■□□□□ 0.43
SHD-201ENST00000543264 APRG1Q8IVJ8 170 aa17.74■□□□□ 0.43
SHD-201ENST00000543264 NDUFA4O00483 81 aa17.73■□□□□ 0.43
SHD-201ENST00000543264 MUSTN1Q8IVN3 82 aa17.73■□□□□ 0.43
SHD-201ENST00000543264 IGHV3OR16-10A0A075B7F0 116 aa17.73■□□□□ 0.43
SHD-201ENST00000543264 NPFFO15130 113 aa17.73■□□□□ 0.43
SHD-201ENST00000543264 TMEM263Q8WUH6 116 aaKnown RBP17.73■□□□□ 0.43
SHD-201ENST00000543264 Q1RN00 199 aa17.72■□□□□ 0.43
SHD-201ENST00000543264 SS18L2Q9UHA2 77 aa17.71■□□□□ 0.43
SHD-201ENST00000543264 CITED1Q99966 193 aa17.71■□□□□ 0.43
SHD-201ENST00000543264 TRBV27A0A0K0K1C4 114 aa17.7■□□□□ 0.42
SHD-201ENST00000543264 NTN5Q8WTR8 489 aaPredicted RBP17.7■□□□□ 0.42
SHD-201ENST00000543264 TRAV12-3A0A0B4J271 114 aa17.7■□□□□ 0.42
SHD-201ENST00000543264 LEPROTO15243 131 aa17.7■□□□□ 0.42
SHD-201ENST00000543264 ELANEP08246 267 aa17.7■□□□□ 0.42
SHD-201ENST00000543264 TMEM223A0PJW6 202 aa17.69■□□□□ 0.42
SHD-201ENST00000543264 IGHV4-39P01824 125 aa17.69■□□□□ 0.42
SHD-201ENST00000543264 RHPN1-AS1Q9BWJ2 59 aa17.69■□□□□ 0.42
SHD-201ENST00000543264 BEX4Q9NWD9 120 aaPredicted RBP17.69■□□□□ 0.42
SHD-201ENST00000543264 CEP295Q9C0D2 2601 aa17.69■□□□□ 0.42
SHD-201ENST00000543264 MOB4Q9Y3A3 225 aa17.69■□□□□ 0.42
SHD-201ENST00000543264 C19orf54Q5BKX5 351 aa17.68■□□□□ 0.42
SHD-201ENST00000543264 GAGE5Q13069 117 aa17.68■□□□□ 0.42
SHD-201ENST00000543264 GAGE6Q13070 117 aa17.68■□□□□ 0.42
SHD-201ENST00000543264 Q8N1Y9 231 aa17.68■□□□□ 0.42
SHD-201ENST00000543264 GAGE2BQ13066 116 aa17.67■□□□□ 0.42
SHD-201ENST00000543264 GAGE2EQ4V326 116 aa17.67■□□□□ 0.42
SHD-201ENST00000543264 GAGE2DQ9UEU5 116 aa17.67■□□□□ 0.42
SHD-201ENST00000543264 PTPRQQ9UMZ3 2332 aa17.67■□□□□ 0.42
SHD-201ENST00000543264 KLLNB2CW77 178 aa17.67■□□□□ 0.42
SHD-201ENST00000543264 SNCGO76070 127 aa17.67■□□□□ 0.42
SHD-201ENST00000543264 ZNF56Q15929 161 aa17.67■□□□□ 0.42
SHD-201ENST00000543264 COL6A6A6NMZ7 2263 aa17.66■□□□□ 0.42
SHD-201ENST00000543264 CELSR1Q9NYQ6 3014 aa17.66■□□□□ 0.42
SHD-201ENST00000543264 TRAV4A0A0B4J268 109 aa17.66■□□□□ 0.42
SHD-201ENST00000543264 TRBV7-9A0A0J9YWB2 115 aa17.66■□□□□ 0.42
SHD-201ENST00000543264 B5MCH6 92 aa17.66■□□□□ 0.42
SHD-201ENST00000543264 CRLF1O75462 422 aa17.66■□□□□ 0.42
SHD-201ENST00000543264 ZNF580Q9UK33 172 aa17.66■□□□□ 0.42
SHD-201ENST00000543264 A0A0B4J2C4 111 aa17.66■□□□□ 0.42
SHD-201ENST00000543264 LGALS9O00182 355 aa17.66■□□□□ 0.42
SHD-201ENST00000543264 ADORA2A-AS1P86434 159 aa17.66■□□□□ 0.42
SHD-201ENST00000543264 NHLRC4P0CG21 123 aaPredicted RBP17.65■□□□□ 0.42
SHD-201ENST00000543264 P0DMU3 169 aa17.65■□□□□ 0.42
SHD-201ENST00000543264 FAM231AP0DMU4 169 aa17.65■□□□□ 0.42
SHD-201ENST00000543264 FAM231CP0DMU5 169 aa17.65■□□□□ 0.42
SHD-201ENST00000543264 A0A1W2PPR1 153 aa17.65■□□□□ 0.42
SHD-201ENST00000543264 ZNF22P17026 224 aaPredicted RBP17.65■□□□□ 0.42
SHD-201ENST00000543264 ATXN8Q156A1 80 aa17.65■□□□□ 0.42
SHD-201ENST00000543264 LINC01620Q4KN68 170 aa17.65■□□□□ 0.42
SHD-201ENST00000543264 A0A0J9YXV3 536 aa17.64■□□□□ 0.41
SHD-201ENST00000543264 TRBV6-5A0A0K0K1A5 114 aa17.64■□□□□ 0.41
SHD-201ENST00000543264 M0QXV9 152 aa17.64■□□□□ 0.41
SHD-201ENST00000543264 RHODO00212 210 aa17.64■□□□□ 0.41
SHD-201ENST00000543264 SPTAN1Q13813 2472 aaKnown RBP17.64■□□□□ 0.41
SHD-201ENST00000543264 TEX49A0A1B0GTD5 131 aa17.63■□□□□ 0.41
SHD-201ENST00000543264 ADARB2-AS1A8MUL3 147 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 194.6 ms