RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 ARMS2P0C7Q2 107 aa12.3□□□□□ -0.44
LTBR-211ENST00000543190 GAGE1Q13065 139 aa12.3□□□□□ -0.44
LTBR-211ENST00000543190 GAGE4Q13068 117 aa12.3□□□□□ -0.44
LTBR-211ENST00000543190 GAGE5Q13069 117 aa12.3□□□□□ -0.44
LTBR-211ENST00000543190 GAGE13Q4V321 117 aa12.3□□□□□ -0.44
LTBR-211ENST00000543190 C14orf178Q8N769 122 aaPredicted RBP12.3□□□□□ -0.44
LTBR-211ENST00000543190 RMI2Q96E14 147 aa12.3□□□□□ -0.44
LTBR-211ENST00000543190 G3V3Q6 166 aa12.29□□□□□ -0.44
LTBR-211ENST00000543190 H3BVH4 76 aa12.29□□□□□ -0.44
LTBR-211ENST00000543190 OR11H4Q8NGC9 324 aa12.29□□□□□ -0.44
LTBR-211ENST00000543190 OR2T35Q8NGX2 323 aa12.29□□□□□ -0.44
LTBR-211ENST00000543190 SH2D1AO60880 128 aa12.28□□□□□ -0.44
LTBR-211ENST00000543190 AKR1C8PQ5T2L2 129 aa12.28□□□□□ -0.44
LTBR-211ENST00000543190 Q8N976 141 aa12.28□□□□□ -0.44
LTBR-211ENST00000543190 OR10G8Q8NGN5 311 aa12.28□□□□□ -0.44
LTBR-211ENST00000543190 PLA2G1BP04054 148 aaKnown RBP12.27□□□□□ -0.45
LTBR-211ENST00000543190 CXCL1P09341 107 aa12.27□□□□□ -0.45
LTBR-211ENST00000543190 PHLDA3Q9Y5J5 127 aa12.27□□□□□ -0.45
LTBR-211ENST00000543190 FXYD6-FXYD2A0A087WZ82 144 aa12.26□□□□□ -0.45
LTBR-211ENST00000543190 MAP1LC3B2A6NCE7 125 aa12.26□□□□□ -0.45
LTBR-211ENST00000543190 UBE2G2P60604 165 aa12.26□□□□□ -0.45
LTBR-211ENST00000543190 ELOBQ15370 118 aa12.26□□□□□ -0.45
LTBR-211ENST00000543190 ZFP82Q8N141 532 aa12.26□□□□□ -0.45
LTBR-211ENST00000543190 MAP1LC3BQ9GZQ8 125 aa12.26□□□□□ -0.45
LTBR-211ENST00000543190 CYTL1Q9NRR1 136 aa12.26□□□□□ -0.45
LTBR-211ENST00000543190 TPT1P13693 172 aaKnown RBP12.25□□□□□ -0.45
LTBR-211ENST00000543190 UBE2D3P61077 147 aa12.25□□□□□ -0.45
LTBR-211ENST00000543190 UBE2G1P62253 170 aa12.25□□□□□ -0.45
LTBR-211ENST00000543190 UBE2D2P62837 147 aa12.25□□□□□ -0.45
LTBR-211ENST00000543190 HAMPP81172 84 aa12.25□□□□□ -0.45
LTBR-211ENST00000543190 URGCP-MRPS24S4R325 110 aa12.25□□□□□ -0.45
LTBR-211ENST00000543190 TRBV7-3A0A075B6L6 115 aa12.24□□□□□ -0.45
LTBR-211ENST00000543190 S100A9P06702 114 aaKnown RBP12.24□□□□□ -0.45
LTBR-211ENST00000543190 KRTAP29-1A8MX34 341 aaPredicted RBP12.23□□□□□ -0.45
LTBR-211ENST00000543190 M0R036 132 aa12.23□□□□□ -0.45
LTBR-211ENST00000543190 RPL36AP83881 106 aaKnown RBP12.23□□□□□ -0.45
LTBR-211ENST00000543190 Q0VG73 95 aa12.23□□□□□ -0.45
LTBR-211ENST00000543190 FAM74A4Q5TZK3 123 aa12.23□□□□□ -0.45
LTBR-211ENST00000543190 PRR27Q6MZM9 219 aa12.23□□□□□ -0.45
LTBR-211ENST00000543190 STOML3Q8TAV4 291 aa12.23□□□□□ -0.45
LTBR-211ENST00000543190 RPL36ALQ969Q0 106 aaKnown RBP12.23□□□□□ -0.45
LTBR-211ENST00000543190 SSBP4Q9BWG4 385 aaPredicted RBP12.23□□□□□ -0.45
LTBR-211ENST00000543190 RAB4BP61018 213 aa12.22□□□□□ -0.45
LTBR-211ENST00000543190 ZNF345Q14585 488 aa12.22□□□□□ -0.45
LTBR-211ENST00000543190 DEFB104AQ8WTQ1 72 aa12.22□□□□□ -0.45
LTBR-211ENST00000543190 BAALCQ8WXS3 180 aa12.22□□□□□ -0.45
LTBR-211ENST00000543190 MLST8Q9BVC4 326 aa12.22□□□□□ -0.45
LTBR-211ENST00000543190 A0A087WWL8 130 aa12.21□□□□□ -0.45
LTBR-211ENST00000543190 GRIFINA4D1Z8 144 aa12.21□□□□□ -0.45
LTBR-211ENST00000543190 LINC00528Q8N1L1 170 aa12.21□□□□□ -0.45
LTBR-211ENST00000543190 MBD3L1Q8WWY6 194 aa12.21□□□□□ -0.45
LTBR-211ENST00000543190 A0A087WX48 190 aa12.2□□□□□ -0.46
LTBR-211ENST00000543190 TRBV6-8A0A0A6YYG3 113 aa12.2□□□□□ -0.46
LTBR-211ENST00000543190 UMAD1C9J7I0 102 aa12.2□□□□□ -0.46
LTBR-211ENST00000543190 SNAI2O43623 268 aa12.2□□□□□ -0.46
LTBR-211ENST00000543190 OR5AL1P0C617 328 aa12.2□□□□□ -0.46
LTBR-211ENST00000543190 CHAC1Q9BUX1 264 aa12.2□□□□□ -0.46
LTBR-211ENST00000543190 KLK12Q9UKR0 248 aa12.2□□□□□ -0.46
LTBR-211ENST00000543190 M0R381 172 aa12.19□□□□□ -0.46
LTBR-211ENST00000543190 LECT2O14960 151 aa12.19□□□□□ -0.46
LTBR-211ENST00000543190 KRTAP10-4P60372 401 aaPredicted RBP12.19□□□□□ -0.46
LTBR-211ENST00000543190 PKIAP61925 76 aa12.19□□□□□ -0.46
LTBR-211ENST00000543190 SCXQ7RTU7 201 aa12.19□□□□□ -0.46
LTBR-211ENST00000543190 VAX2Q9UIW0 290 aa12.19□□□□□ -0.46
LTBR-211ENST00000543190 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.18□□□□□ -0.46
LTBR-211ENST00000543190 IGKV2D-24A0A075B6R9 120 aa12.18□□□□□ -0.46
LTBR-211ENST00000543190 ARPC5O15511 151 aa12.18□□□□□ -0.46
LTBR-211ENST00000543190 AKR1C3P42330 323 aa12.18□□□□□ -0.46
LTBR-211ENST00000543190 C14orf177Q52M58 125 aa12.18□□□□□ -0.46
LTBR-211ENST00000543190 CST9LP1Q5W188 147 aa12.18□□□□□ -0.46
LTBR-211ENST00000543190 KCNRGQ8N5I3 272 aa12.17□□□□□ -0.46
LTBR-211ENST00000543190 UBE2WQ96B02 151 aa12.17□□□□□ -0.46
LTBR-211ENST00000543190 DNAJC30Q96LL9 226 aa12.17□□□□□ -0.46
LTBR-211ENST00000543190 RBFOX3A6NFN3 312 aa12.16□□□□□ -0.46
LTBR-211ENST00000543190 PAGE4O60829 102 aa12.16□□□□□ -0.46
LTBR-211ENST00000543190 TMEM97Q5BJF2 176 aa12.16□□□□□ -0.46
LTBR-211ENST00000543190 KCNIP4Q6PIL6 250 aa12.16□□□□□ -0.46
LTBR-211ENST00000543190 ENHOQ6UWT2 76 aa12.16□□□□□ -0.46
LTBR-211ENST00000543190 NEXN-AS1Q8NBZ9 246 aa12.16□□□□□ -0.46
LTBR-211ENST00000543190 ZNF471Q9BX82 626 aaPredicted RBP12.16□□□□□ -0.46
LTBR-211ENST00000543190 HMSDA8MTL9 139 aa12.15□□□□□ -0.46
LTBR-211ENST00000543190 OR10AG1Q8NH19 301 aa12.15□□□□□ -0.46
LTBR-211ENST00000543190 TMSB15BA0A087X1C1 80 aa12.14□□□□□ -0.47
LTBR-211ENST00000543190 J3QL48 77 aa12.14□□□□□ -0.47
LTBR-211ENST00000543190 IGLV2-8P01709 118 aa12.14□□□□□ -0.47
LTBR-211ENST00000543190 MIAQ16674 131 aa12.14□□□□□ -0.47
LTBR-211ENST00000543190 SFT2D1Q8WV19 159 aa12.14□□□□□ -0.47
LTBR-211ENST00000543190 C1orf43Q9BWL3 253 aa12.14□□□□□ -0.47
LTBR-211ENST00000543190 PRR34Q9NV39 138 aa12.14□□□□□ -0.47
LTBR-211ENST00000543190 KIF25-AS1Q9Y6Z4 181 aa12.14□□□□□ -0.47
LTBR-211ENST00000543190 RGS21Q2M5E4 152 aa12.13□□□□□ -0.47
LTBR-211ENST00000543190 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.13□□□□□ -0.47
LTBR-211ENST00000543190 CIRBP-AS1Q8TBR5 109 aa12.13□□□□□ -0.47
LTBR-211ENST00000543190 LINC01620Q4KN68 170 aa12.12□□□□□ -0.47
LTBR-211ENST00000543190 MPV17L2Q567V2 206 aa12.12□□□□□ -0.47
LTBR-211ENST00000543190 DGAT2L7PQ6IED9 249 aa12.12□□□□□ -0.47
LTBR-211ENST00000543190 BAGE2Q86Y30 109 aa12.12□□□□□ -0.47
LTBR-211ENST00000543190 A0A0D9SG52 128 aa12.11□□□□□ -0.47
LTBR-211ENST00000543190 SCO2A0A1W2PP80 73 aa12.11□□□□□ -0.47
LTBR-211ENST00000543190 TRAV1-1A0A0B4J248 108 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms