RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 KCNRGQ8N5I3 272 aa10.43□□□□□ -0.74
VPS33A-206ENST00000542310 FRZBQ92765 325 aa10.43□□□□□ -0.74
VPS33A-206ENST00000542310 SFRP2Q96HF1 295 aa10.43□□□□□ -0.74
VPS33A-206ENST00000542310 SAMD10Q9BYL1 202 aa10.43□□□□□ -0.74
VPS33A-206ENST00000542310 JPT2Q9H910 190 aa10.43□□□□□ -0.74
VPS33A-206ENST00000542310 PHLDA3Q9Y5J5 127 aa10.43□□□□□ -0.74
VPS33A-206ENST00000542310 S100A9P06702 114 aaKnown RBP10.42□□□□□ -0.74
VPS33A-206ENST00000542310 CXCL1P09341 107 aa10.42□□□□□ -0.74
VPS33A-206ENST00000542310 C14orf178Q8N769 122 aaPredicted RBP10.42□□□□□ -0.74
VPS33A-206ENST00000542310 TRBV10-1A0A0K0K1A3 114 aa10.41□□□□□ -0.74
VPS33A-206ENST00000542310 HMSDA8MTL9 139 aa10.41□□□□□ -0.74
VPS33A-206ENST00000542310 FAM74A4Q5TZK3 123 aa10.41□□□□□ -0.74
VPS33A-206ENST00000542310 Q5VSD8 79 aa10.41□□□□□ -0.74
VPS33A-206ENST00000542310 MBD3L1Q8WWY6 194 aa10.41□□□□□ -0.74
VPS33A-206ENST00000542310 GRIFINA4D1Z8 144 aa10.4□□□□□ -0.74
VPS33A-206ENST00000542310 PAGE4O60829 102 aa10.4□□□□□ -0.74
VPS33A-206ENST00000542310 C1QBP02746 253 aa10.4□□□□□ -0.74
VPS33A-206ENST00000542310 CHCHD7Q9BUK0 85 aa10.4□□□□□ -0.74
VPS33A-206ENST00000542310 COX11Q9Y6N1 276 aa10.4□□□□□ -0.74
VPS33A-206ENST00000542310 FAT1Q14517 4588 aa10.4□□□□□ -0.75
VPS33A-206ENST00000542310 A0A0D9SG52 128 aa10.39□□□□□ -0.75
VPS33A-206ENST00000542310 SMLR1H3BR10 107 aa10.39□□□□□ -0.75
VPS33A-206ENST00000542310 M0R381 172 aa10.39□□□□□ -0.75
VPS33A-206ENST00000542310 PFDN1O60925 122 aa10.39□□□□□ -0.75
VPS33A-206ENST00000542310 Q8N3U1 123 aa10.39□□□□□ -0.75
VPS33A-206ENST00000542310 FAM213BQ8TBF2 198 aa10.39□□□□□ -0.75
VPS33A-206ENST00000542310 Q9UF83 564 aa10.39□□□□□ -0.75
VPS33A-206ENST00000542310 A0A087WWL8 130 aa10.38□□□□□ -0.75
VPS33A-206ENST00000542310 KANTRA0A1W2PQU2 76 aa10.38□□□□□ -0.75
VPS33A-206ENST00000542310 BCL2L11O43521 198 aa10.38□□□□□ -0.75
VPS33A-206ENST00000542310 EIF5AP63241 154 aaKnown RBP10.38□□□□□ -0.75
VPS33A-206ENST00000542310 SFT2D1Q8WV19 159 aa10.38□□□□□ -0.75
VPS33A-206ENST00000542310 RMI2Q96E14 147 aa10.38□□□□□ -0.75
VPS33A-206ENST00000542310 URGCP-MRPS24S4R325 110 aa10.38□□□□□ -0.75
VPS33A-206ENST00000542310 TMSB15BA0A087X1C1 80 aa10.37□□□□□ -0.75
VPS33A-206ENST00000542310 SCO2A0A1W2PP80 73 aa10.37□□□□□ -0.75
VPS33A-206ENST00000542310 INAFM2P0DMQ5 153 aa10.37□□□□□ -0.75
VPS33A-206ENST00000542310 RPL36AP83881 106 aaKnown RBP10.37□□□□□ -0.75
VPS33A-206ENST00000542310 DAZ4Q86SG3 579 aaKnown RBP10.37□□□□□ -0.75
VPS33A-206ENST00000542310 NIT1Q86X76 327 aa10.37□□□□□ -0.75
VPS33A-206ENST00000542310 OR10G8Q8NGN5 311 aa10.37□□□□□ -0.75
VPS33A-206ENST00000542310 RPL36ALQ969Q0 106 aaKnown RBP10.37□□□□□ -0.75
VPS33A-206ENST00000542310 MLST8Q9BVC4 326 aa10.37□□□□□ -0.75
VPS33A-206ENST00000542310 ZNF471Q9BX82 626 aaPredicted RBP10.37□□□□□ -0.75
VPS33A-206ENST00000542310 DAZ3Q9NR90 486 aaKnown RBP10.37□□□□□ -0.75
VPS33A-206ENST00000542310 TRBV7-3A0A075B6L6 115 aa10.36□□□□□ -0.75
VPS33A-206ENST00000542310 UBE2D3P61077 147 aa10.36□□□□□ -0.75
VPS33A-206ENST00000542310 UBE2D2P62837 147 aa10.36□□□□□ -0.75
VPS33A-206ENST00000542310 DNAH8Q96JB1 4490 aa10.36□□□□□ -0.75
VPS33A-206ENST00000542310 SNAI2O43623 268 aa10.35□□□□□ -0.75
VPS33A-206ENST00000542310 RAB4BP61018 213 aa10.35□□□□□ -0.75
VPS33A-206ENST00000542310 WFDC2Q14508 124 aa10.35□□□□□ -0.75
VPS33A-206ENST00000542310 ELOBQ15370 118 aa10.35□□□□□ -0.75
VPS33A-206ENST00000542310 FAM229AH3BQW9 127 aa10.34□□□□□ -0.75
VPS33A-206ENST00000542310 H2AFB1P0C5Y9 115 aa10.34□□□□□ -0.75
VPS33A-206ENST00000542310 OR5AL1P0C617 328 aa10.34□□□□□ -0.75
VPS33A-206ENST00000542310 Q6ZSA8 131 aa10.34□□□□□ -0.75
VPS33A-206ENST00000542310 BAGE2Q86Y30 109 aa10.34□□□□□ -0.75
VPS33A-206ENST00000542310 SSBP4Q9BWG4 385 aaPredicted RBP10.34□□□□□ -0.75
VPS33A-206ENST00000542310 MANBALQ9NQG1 85 aa10.34□□□□□ -0.75
VPS33A-206ENST00000542310 RPL19P84098 196 aaKnown RBP10.33□□□□□ -0.76
VPS33A-206ENST00000542310 PRR27Q6MZM9 219 aa10.33□□□□□ -0.76
VPS33A-206ENST00000542310 KCNIP4Q6PIL6 250 aa10.33□□□□□ -0.76
VPS33A-206ENST00000542310 ATRAIDQ6UW56 229 aa10.33□□□□□ -0.76
VPS33A-206ENST00000542310 OR10AG1Q8NH19 301 aa10.33□□□□□ -0.76
VPS33A-206ENST00000542310 C11orf52Q96A22 123 aa10.33□□□□□ -0.76
VPS33A-206ENST00000542310 A0A087WX48 190 aa10.32□□□□□ -0.76
VPS33A-206ENST00000542310 A0A1B0GV50 99 aa10.32□□□□□ -0.76
VPS33A-206ENST00000542310 ZNF56Q15929 161 aa10.32□□□□□ -0.76
VPS33A-206ENST00000542310 TRAV1-1A0A0B4J248 108 aa10.31□□□□□ -0.76
VPS33A-206ENST00000542310 SMR3BP02814 79 aaPredicted RBP10.31□□□□□ -0.76
VPS33A-206ENST00000542310 PKIAP61925 76 aa10.31□□□□□ -0.76
VPS33A-206ENST00000542310 Q0VG73 95 aa10.31□□□□□ -0.76
VPS33A-206ENST00000542310 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.31□□□□□ -0.76
VPS33A-206ENST00000542310 NEXN-AS1Q8NBZ9 246 aa10.31□□□□□ -0.76
VPS33A-206ENST00000542310 KLK12Q9UKR0 248 aa10.31□□□□□ -0.76
VPS33A-206ENST00000542310 DMBT1Q9UGM3 2413 aaPredicted RBP10.31□□□□□ -0.76
VPS33A-206ENST00000542310 MYCBP2O75592 4640 aa10.3□□□□□ -0.76
VPS33A-206ENST00000542310 IGKV2D-24A0A075B6R9 120 aa10.3□□□□□ -0.76
VPS33A-206ENST00000542310 TRBV6-8A0A0A6YYG3 113 aa10.3□□□□□ -0.76
VPS33A-206ENST00000542310 RPL35P42766 123 aaKnown RBP10.3□□□□□ -0.76
VPS33A-206ENST00000542310 RAB5CP51148 216 aa10.3□□□□□ -0.76
VPS33A-206ENST00000542310 HAMPP81172 84 aa10.3□□□□□ -0.76
VPS33A-206ENST00000542310 SPANXN1Q5VSR9 72 aa10.3□□□□□ -0.76
VPS33A-206ENST00000542310 TMUB2Q71RG4 321 aa10.3□□□□□ -0.76
VPS33A-206ENST00000542310 Q8N976 141 aa10.3□□□□□ -0.76
VPS33A-206ENST00000542310 SMIM12Q96EX1 92 aa10.3□□□□□ -0.76
VPS33A-206ENST00000542310 AP1S3Q96PC3 154 aa10.3□□□□□ -0.76
VPS33A-206ENST00000542310 FAM30AQ9NZY2 134 aa10.3□□□□□ -0.76
VPS33A-206ENST00000542310 RBFOX3A6NFN3 312 aa10.29□□□□□ -0.76
VPS33A-206ENST00000542310 LECT2O14960 151 aa10.29□□□□□ -0.76
VPS33A-206ENST00000542310 TMEM97Q5BJF2 176 aa10.29□□□□□ -0.76
VPS33A-206ENST00000542310 EIF5AL1Q6IS14 154 aaKnown RBP10.29□□□□□ -0.76
VPS33A-206ENST00000542310 BAALCQ8WXS3 180 aa10.29□□□□□ -0.76
VPS33A-206ENST00000542310 UBE2WQ96B02 151 aa10.29□□□□□ -0.76
VPS33A-206ENST00000542310 HERC1Q15751 4861 aa10.29□□□□□ -0.76
VPS33A-206ENST00000542310 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.28□□□□□ -0.76
VPS33A-206ENST00000542310 TEX46H3BTG2 121 aa10.28□□□□□ -0.76
VPS33A-206ENST00000542310 GNG13Q9P2W3 67 aa10.28□□□□□ -0.76
VPS33A-206ENST00000542310 VAX2Q9UIW0 290 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms