RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 OR9G4Q8NGQ1 327 aa10.18□□□□□ -0.78
PTPN1-202ENST00000541713 OR1N2Q8NGR9 330 aa10.18□□□□□ -0.78
PTPN1-202ENST00000541713 ADARB2-AS1A8MUL3 147 aa10.18□□□□□ -0.78
PTPN1-202ENST00000541713 PROK1P58294 105 aa10.17□□□□□ -0.78
PTPN1-202ENST00000541713 A0A1W2PPM0 123 aa10.17□□□□□ -0.78
PTPN1-202ENST00000541713 RBAKDNA6NC62 111 aa10.17□□□□□ -0.78
PTPN1-202ENST00000541713 ZNF815PA8K554 130 aa10.17□□□□□ -0.78
PTPN1-202ENST00000541713 IGHG2P01859 326 aa10.17□□□□□ -0.78
PTPN1-202ENST00000541713 HLA-DRB4P13762 266 aa10.17□□□□□ -0.78
PTPN1-202ENST00000541713 KRTAP10-9P60411 292 aa10.17□□□□□ -0.78
PTPN1-202ENST00000541713 SH2D6Q7Z4S9 175 aa10.17□□□□□ -0.78
PTPN1-202ENST00000541713 TMEM190Q8WZ59 177 aa10.17□□□□□ -0.78
PTPN1-202ENST00000541713 SMPXQ9UHP9 88 aa10.17□□□□□ -0.78
PTPN1-202ENST00000541713 HLA-DRB4X5D2U9 266 aa10.17□□□□□ -0.78
PTPN1-202ENST00000541713 FASNP49327 2511 aaKnown RBP10.17□□□□□ -0.78
PTPN1-202ENST00000541713 U3KQE9 123 aa10.17□□□□□ -0.78
PTPN1-202ENST00000541713 H3BRM9 83 aa10.16□□□□□ -0.78
PTPN1-202ENST00000541713 OVOL1O14753 267 aa10.16□□□□□ -0.78
PTPN1-202ENST00000541713 PLEKHB2Q96CS7 222 aa10.16□□□□□ -0.78
PTPN1-202ENST00000541713 PRADC1Q9BSG0 188 aa10.16□□□□□ -0.78
PTPN1-202ENST00000541713 A0A087WX48 190 aa10.16□□□□□ -0.78
PTPN1-202ENST00000541713 CEMP1Q6PRD7 247 aaPredicted RBP10.16□□□□□ -0.78
PTPN1-202ENST00000541713 CNFNQ9BYD5 112 aa10.16□□□□□ -0.78
PTPN1-202ENST00000541713 APCP25054 2843 aa10.16□□□□□ -0.78
PTPN1-202ENST00000541713 IGHV3-16A0A0C4DH30 117 aa10.16□□□□□ -0.78
PTPN1-202ENST00000541713 A6NDX4 124 aa10.16□□□□□ -0.78
PTPN1-202ENST00000541713 GCN1Q92616 2671 aaKnown RBP10.15□□□□□ -0.78
PTPN1-202ENST00000541713 SLURP1P55000 103 aa10.15□□□□□ -0.78
PTPN1-202ENST00000541713 NPC2P61916 151 aa10.15□□□□□ -0.78
PTPN1-202ENST00000541713 PRORYQ9H606 182 aa10.15□□□□□ -0.78
PTPN1-202ENST00000541713 SDHAF1A6NFY7 115 aa10.15□□□□□ -0.78
PTPN1-202ENST00000541713 WFDC2Q14508 124 aa10.15□□□□□ -0.78
PTPN1-202ENST00000541713 Q9UF83 564 aa10.15□□□□□ -0.78
PTPN1-202ENST00000541713 B4DSR2 109 aa10.15□□□□□ -0.79
PTPN1-202ENST00000541713 H7C1H1 209 aa10.15□□□□□ -0.79
PTPN1-202ENST00000541713 K7ERU9 68 aa10.15□□□□□ -0.79
PTPN1-202ENST00000541713 SUMO4Q6EEV6 95 aa10.15□□□□□ -0.79
PTPN1-202ENST00000541713 Q8N1Y9 231 aa10.15□□□□□ -0.79
PTPN1-202ENST00000541713 IGHV4OR15-8A0A075B7B6 117 aa10.14□□□□□ -0.79
PTPN1-202ENST00000541713 A0A087WW49 117 aa10.14□□□□□ -0.79
PTPN1-202ENST00000541713 ZNF876PQ49A33 203 aa10.14□□□□□ -0.79
PTPN1-202ENST00000541713 COX8CQ7Z4L0 72 aa10.14□□□□□ -0.79
PTPN1-202ENST00000541713 BAALCQ8WXS3 180 aa10.14□□□□□ -0.79
PTPN1-202ENST00000541713 IGHV3-38A0A0C4DH36 116 aa10.14□□□□□ -0.79
PTPN1-202ENST00000541713 K7EP34 96 aa10.14□□□□□ -0.79
PTPN1-202ENST00000541713 ETDBQ3ZM63 59 aa10.14□□□□□ -0.79
PTPN1-202ENST00000541713 ZNF418Q8TF45 676 aaPredicted RBP10.14□□□□□ -0.79
PTPN1-202ENST00000541713 ZNF479Q96JC4 524 aa10.14□□□□□ -0.79
PTPN1-202ENST00000541713 HELZ2Q9BYK8 2649 aaKnown RBP10.14□□□□□ -0.79
PTPN1-202ENST00000541713 F8VRH5 84 aa10.13□□□□□ -0.79
PTPN1-202ENST00000541713 CEND1Q8N111 149 aa10.13□□□□□ -0.79
PTPN1-202ENST00000541713 ZNF469Q96JG9 3925 aaPredicted RBP10.13□□□□□ -0.79
PTPN1-202ENST00000541713 HOXA3O43365 443 aaPredicted RBP10.13□□□□□ -0.79
PTPN1-202ENST00000541713 ID1P41134 155 aa10.13□□□□□ -0.79
PTPN1-202ENST00000541713 APRG1Q8IVJ8 170 aa10.13□□□□□ -0.79
PTPN1-202ENST00000541713 USMG5Q96IX5 58 aa10.13□□□□□ -0.79
PTPN1-202ENST00000541713 TEX48A0A1B0GUV7 120 aa10.13□□□□□ -0.79
PTPN1-202ENST00000541713 DEFB131AP59861 70 aa10.13□□□□□ -0.79
PTPN1-202ENST00000541713 C11orf86A6NJI1 115 aa10.12□□□□□ -0.79
PTPN1-202ENST00000541713 SOCS3O14543 225 aa10.12□□□□□ -0.79
PTPN1-202ENST00000541713 ORMDL2Q53FV1 153 aa10.12□□□□□ -0.79
PTPN1-202ENST00000541713 PHLDA1Q8WV24 401 aaPredicted RBP10.12□□□□□ -0.79
PTPN1-202ENST00000541713 KIR2DL4Q99706 377 aa10.12□□□□□ -0.79
PTPN1-202ENST00000541713 MRPL16Q9NX20 251 aaKnown RBP10.12□□□□□ -0.79
PTPN1-202ENST00000541713 ZNF580Q9UK33 172 aa10.12□□□□□ -0.79
PTPN1-202ENST00000541713 A0A0U1RRA0 63 aa10.11□□□□□ -0.79
PTPN1-202ENST00000541713 C12orf74Q32Q52 190 aa10.11□□□□□ -0.79
PTPN1-202ENST00000541713 PSMG3-AS1Q96PY0 264 aa10.11□□□□□ -0.79
PTPN1-202ENST00000541713 SNRPD3P62318 126 aaKnown RBP10.11□□□□□ -0.79
PTPN1-202ENST00000541713 NBPF19A0A087WUL8 3843 aa10.11□□□□□ -0.79
PTPN1-202ENST00000541713 HOXD3P31249 432 aaPredicted RBP10.1□□□□□ -0.79
PTPN1-202ENST00000541713 CDKN1BP46527 198 aa10.1□□□□□ -0.79
PTPN1-202ENST00000541713 MRAP2Q96G30 205 aa10.1□□□□□ -0.79
PTPN1-202ENST00000541713 PGPEP1Q9NXJ5 209 aa10.1□□□□□ -0.79
PTPN1-202ENST00000541713 TCTEX1D4Q5JR98 221 aa10.1□□□□□ -0.79
PTPN1-202ENST00000541713 UBE2E2Q96LR5 201 aa10.1□□□□□ -0.79
PTPN1-202ENST00000541713 GTSF1LQ9H1H1 148 aa10.1□□□□□ -0.79
PTPN1-202ENST00000541713 LINC01549A6NIU2 74 aa10.1□□□□□ -0.79
PTPN1-202ENST00000541713 ZFP2Q6ZN57 461 aa10.09□□□□□ -0.79
PTPN1-202ENST00000541713 DCANP1Q8TF63 244 aa10.09□□□□□ -0.79
PTPN1-202ENST00000541713 MYMXA0A1B0GTQ4 84 aa10.09□□□□□ -0.79
PTPN1-202ENST00000541713 RAX2Q96IS3 184 aa10.09□□□□□ -0.79
PTPN1-202ENST00000541713 IGLL5B9A064 214 aa10.09□□□□□ -0.79
PTPN1-202ENST00000541713 PLNP26678 52 aa10.09□□□□□ -0.79
PTPN1-202ENST00000541713 PSMB2P49721 201 aa10.09□□□□□ -0.79
PTPN1-202ENST00000541713 A8MZ25 164 aa10.08□□□□□ -0.8
PTPN1-202ENST00000541713 IGHV3-53P01767 116 aa10.08□□□□□ -0.8
PTPN1-202ENST00000541713 LGALS1P09382 135 aaKnown RBP10.08□□□□□ -0.8
PTPN1-202ENST00000541713 INSL3P51460 131 aa10.08□□□□□ -0.8
PTPN1-202ENST00000541713 PTH2Q96A98 100 aa10.08□□□□□ -0.8
PTPN1-202ENST00000541713 SPXQ9BT56 116 aa10.08□□□□□ -0.8
PTPN1-202ENST00000541713 SETXQ7Z333 2677 aaKnown RBP10.08□□□□□ -0.8
PTPN1-202ENST00000541713 PRSS2P07478 247 aa10.08□□□□□ -0.8
PTPN1-202ENST00000541713 C19orf54Q5BKX5 351 aa10.08□□□□□ -0.8
PTPN1-202ENST00000541713 MRPL53Q96EL3 112 aaKnown RBP10.08□□□□□ -0.8
PTPN1-202ENST00000541713 ZMAT4Q9H898 229 aa10.08□□□□□ -0.8
PTPN1-202ENST00000541713 NEXN-AS1Q8NBZ9 246 aa10.08□□□□□ -0.8
PTPN1-202ENST00000541713 TOMM6Q96B49 74 aa10.08□□□□□ -0.8
PTPN1-202ENST00000541713 SCGB1C2P0DMR2 95 aa10.07□□□□□ -0.8
PTPN1-202ENST00000541713 BBC3Q96PG8 261 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms