RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 SMIM13P0DJ93 91 aa11.28□□□□□ -0.6
VARS2-211ENST00000541562 IGHV3-38A0A0C4DH36 116 aa11.27□□□□□ -0.6
VARS2-211ENST00000541562 HLA-DRB4P13762 266 aa11.27□□□□□ -0.6
VARS2-211ENST00000541562 HSD52Q0P140 79 aa11.27□□□□□ -0.6
VARS2-211ENST00000541562 HLA-DRB4X5D2U9 266 aa11.27□□□□□ -0.6
VARS2-211ENST00000541562 LOC107984156A0A0G2JMH3 177 aa11.27□□□□□ -0.61
VARS2-211ENST00000541562 SH2D6Q7Z4S9 175 aa11.27□□□□□ -0.61
VARS2-211ENST00000541562 APRG1Q8IVJ8 170 aa11.27□□□□□ -0.61
VARS2-211ENST00000541562 ARL17AQ8IVW1 177 aa11.27□□□□□ -0.61
VARS2-211ENST00000541562 PLEKHB2Q96CS7 222 aa11.27□□□□□ -0.61
VARS2-211ENST00000541562 PRORYQ9H606 182 aa11.27□□□□□ -0.61
VARS2-211ENST00000541562 IGLV2-18A0A075B6J9 118 aa11.26□□□□□ -0.61
VARS2-211ENST00000541562 IGHV4OR15-8A0A075B7B6 117 aa11.26□□□□□ -0.61
VARS2-211ENST00000541562 A0A087WW49 117 aa11.26□□□□□ -0.61
VARS2-211ENST00000541562 HOXA3O43365 443 aaPredicted RBP11.26□□□□□ -0.61
VARS2-211ENST00000541562 C9orf118A6NHY6 69 aa11.26□□□□□ -0.61
VARS2-211ENST00000541562 NDUFA4O00483 81 aa11.26□□□□□ -0.61
VARS2-211ENST00000541562 IGHG2P01859 326 aa11.26□□□□□ -0.61
VARS2-211ENST00000541562 BBC3Q96PG8 261 aaPredicted RBP11.26□□□□□ -0.61
VARS2-211ENST00000541562 DPH3P1Q9H4G8 78 aa11.26□□□□□ -0.61
VARS2-211ENST00000541562 ZNF580Q9UK33 172 aa11.26□□□□□ -0.61
VARS2-211ENST00000541562 FAM223BA6NKX1 122 aa11.25□□□□□ -0.61
VARS2-211ENST00000541562 OR11H12B2RN74 326 aa11.25□□□□□ -0.61
VARS2-211ENST00000541562 FAM223AQ8IWN6 122 aa11.25□□□□□ -0.61
VARS2-211ENST00000541562 OR11H1Q8NG94 326 aa11.25□□□□□ -0.61
VARS2-211ENST00000541562 OR11H2Q8NH07 326 aa11.25□□□□□ -0.61
VARS2-211ENST00000541562 SMPXQ9UHP9 88 aa11.25□□□□□ -0.61
VARS2-211ENST00000541562 A0A0U1RRA0 63 aa11.25□□□□□ -0.61
VARS2-211ENST00000541562 ZNF815PA8K554 130 aa11.25□□□□□ -0.61
VARS2-211ENST00000541562 FABP2P12104 132 aa11.25□□□□□ -0.61
VARS2-211ENST00000541562 Q8N1Y9 231 aa11.25□□□□□ -0.61
VARS2-211ENST00000541562 TMEM190Q8WZ59 177 aa11.25□□□□□ -0.61
VARS2-211ENST00000541562 A6NDX4 124 aa11.25□□□□□ -0.61
VARS2-211ENST00000541562 PHLDA1Q8WV24 401 aaPredicted RBP11.25□□□□□ -0.61
VARS2-211ENST00000541562 SRSF2Q01130 221 aaKnown RBP11.24□□□□□ -0.61
VARS2-211ENST00000541562 SUMO4Q6EEV6 95 aa11.24□□□□□ -0.61
VARS2-211ENST00000541562 PRADC1Q9BSG0 188 aa11.24□□□□□ -0.61
VARS2-211ENST00000541562 ATP5LO75964 103 aa11.23□□□□□ -0.61
VARS2-211ENST00000541562 DEFB131AP59861 70 aa11.23□□□□□ -0.61
VARS2-211ENST00000541562 WFDC2Q14508 124 aa11.23□□□□□ -0.61
VARS2-211ENST00000541562 ZNF418Q8TF45 676 aaPredicted RBP11.23□□□□□ -0.61
VARS2-211ENST00000541562 U3KQE9 123 aa11.23□□□□□ -0.61
VARS2-211ENST00000541562 TENM4Q6N022 2769 aa11.23□□□□□ -0.61
VARS2-211ENST00000541562 SDHAF1A6NFY7 115 aa11.23□□□□□ -0.61
VARS2-211ENST00000541562 B4DSR2 109 aa11.23□□□□□ -0.61
VARS2-211ENST00000541562 ZNF876PQ49A33 203 aa11.23□□□□□ -0.61
VARS2-211ENST00000541562 UBE2E2Q96LR5 201 aa11.23□□□□□ -0.61
VARS2-211ENST00000541562 A0A1W2PPM0 123 aa11.22□□□□□ -0.61
VARS2-211ENST00000541562 SEC11AP67812 179 aa11.22□□□□□ -0.61
VARS2-211ENST00000541562 BAALCQ8WXS3 180 aa11.22□□□□□ -0.61
VARS2-211ENST00000541562 OVOL1O14753 267 aa11.22□□□□□ -0.61
VARS2-211ENST00000541562 IGHV3-53P01767 116 aa11.22□□□□□ -0.61
VARS2-211ENST00000541562 GTF2H5Q6ZYL4 71 aa11.22□□□□□ -0.61
VARS2-211ENST00000541562 A0A087WX48 190 aa11.22□□□□□ -0.61
VARS2-211ENST00000541562 ETDBQ3ZM63 59 aa11.22□□□□□ -0.61
VARS2-211ENST00000541562 RBAKDNA6NC62 111 aa11.21□□□□□ -0.61
VARS2-211ENST00000541562 A8MZ25 164 aa11.21□□□□□ -0.61
VARS2-211ENST00000541562 C11orf86A6NJI1 115 aa11.21□□□□□ -0.62
VARS2-211ENST00000541562 HOXD3P31249 432 aaPredicted RBP11.21□□□□□ -0.62
VARS2-211ENST00000541562 OR9G4Q8NGQ1 327 aa11.21□□□□□ -0.62
VARS2-211ENST00000541562 OR1N2Q8NGR9 330 aa11.21□□□□□ -0.62
VARS2-211ENST00000541562 H3BRM9 83 aa11.2□□□□□ -0.62
VARS2-211ENST00000541562 SOCS3O14543 225 aa11.2□□□□□ -0.62
VARS2-211ENST00000541562 TCTEX1D4Q5JR98 221 aa11.2□□□□□ -0.62
VARS2-211ENST00000541562 CNFNQ9BYD5 112 aa11.2□□□□□ -0.62
VARS2-211ENST00000541562 TEX48A0A1B0GUV7 120 aa11.2□□□□□ -0.62
VARS2-211ENST00000541562 H7C1H1 209 aa11.2□□□□□ -0.62
VARS2-211ENST00000541562 PSMG3-AS1Q96PY0 264 aa11.2□□□□□ -0.62
VARS2-211ENST00000541562 ZNF479Q96JC4 524 aa11.2□□□□□ -0.62
VARS2-211ENST00000541562 F8VRH5 84 aa11.19□□□□□ -0.62
VARS2-211ENST00000541562 CEND1Q8N111 149 aa11.19□□□□□ -0.62
VARS2-211ENST00000541562 FLNBO75369 2602 aaKnown RBP11.19□□□□□ -0.62
VARS2-211ENST00000541562 ID1P41134 155 aa11.19□□□□□ -0.62
VARS2-211ENST00000541562 RAX2Q96IS3 184 aa11.19□□□□□ -0.62
VARS2-211ENST00000541562 INSL3P51460 131 aa11.18□□□□□ -0.62
VARS2-211ENST00000541562 PTH2Q96A98 100 aa11.18□□□□□ -0.62
VARS2-211ENST00000541562 VWFP04275 2813 aa11.18□□□□□ -0.62
VARS2-211ENST00000541562 DCANP1Q8TF63 244 aa11.18□□□□□ -0.62
VARS2-211ENST00000541562 USMG5Q96IX5 58 aa11.18□□□□□ -0.62
VARS2-211ENST00000541562 MRPL16Q9NX20 251 aaKnown RBP11.18□□□□□ -0.62
VARS2-211ENST00000541562 XCL2Q9UBD3 114 aa11.18□□□□□ -0.62
VARS2-211ENST00000541562 K7EP34 96 aa11.18□□□□□ -0.62
VARS2-211ENST00000541562 SPXQ9BT56 116 aa11.18□□□□□ -0.62
VARS2-211ENST00000541562 GTSF1LQ9H1H1 148 aa11.18□□□□□ -0.62
VARS2-211ENST00000541562 PGPEP1Q9NXJ5 209 aa11.18□□□□□ -0.62
VARS2-211ENST00000541562 LINC01549A6NIU2 74 aa11.17□□□□□ -0.62
VARS2-211ENST00000541562 SNRPD3P62318 126 aaKnown RBP11.17□□□□□ -0.62
VARS2-211ENST00000541562 CFHR3Q02985 330 aa11.17□□□□□ -0.62
VARS2-211ENST00000541562 C12orf74Q32Q52 190 aa11.17□□□□□ -0.62
VARS2-211ENST00000541562 KIR2DL4Q99706 377 aa11.17□□□□□ -0.62
VARS2-211ENST00000541562 COX8CQ7Z4L0 72 aa11.17□□□□□ -0.62
VARS2-211ENST00000541562 ATRQ13535 2644 aa11.17□□□□□ -0.62
VARS2-211ENST00000541562 ZFP2Q6ZN57 461 aa11.17□□□□□ -0.62
VARS2-211ENST00000541562 PRSS2P07478 247 aa11.16□□□□□ -0.62
VARS2-211ENST00000541562 PSMB2P49721 201 aa11.16□□□□□ -0.62
VARS2-211ENST00000541562 IGKV3OR2-268A0A0C4DH90 116 aa11.16□□□□□ -0.62
VARS2-211ENST00000541562 K7ERU9 68 aa11.16□□□□□ -0.62
VARS2-211ENST00000541562 TSHBP01222 138 aa11.16□□□□□ -0.62
VARS2-211ENST00000541562 ORMDL2Q53FV1 153 aa11.16□□□□□ -0.62
VARS2-211ENST00000541562 ZNF625Q96I27 306 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms