RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 LENEPQ9Y5L5 61 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 OOSP1A8MZH6 123 aa5.84□□□□□ -1.47
CCDC60-204ENST00000539847 M0R3E3 92 aa5.84□□□□□ -1.47
CCDC60-204ENST00000539847 CNIH1O95406 144 aa5.84□□□□□ -1.47
CCDC60-204ENST00000539847 FSHBP01225 129 aa5.84□□□□□ -1.47
CCDC60-204ENST00000539847 IGHG4P01861 327 aa5.84□□□□□ -1.47
CCDC60-204ENST00000539847 CRYBA4P53673 196 aa5.84□□□□□ -1.47
CCDC60-204ENST00000539847 SLURP1P55000 103 aa5.84□□□□□ -1.47
CCDC60-204ENST00000539847 RPL32P62910 135 aaKnown RBP5.84□□□□□ -1.47
CCDC60-204ENST00000539847 ETDBQ3ZM63 59 aa5.84□□□□□ -1.47
CCDC60-204ENST00000539847 LYPD2Q6UXB3 125 aa5.84□□□□□ -1.47
CCDC60-204ENST00000539847 GTSCR1Q86UQ5 136 aa5.84□□□□□ -1.47
CCDC60-204ENST00000539847 NRACQ8N912 160 aa5.84□□□□□ -1.47
CCDC60-204ENST00000539847 LY6G5BQ8NDX9 201 aa5.84□□□□□ -1.47
CCDC60-204ENST00000539847 GLMPQ8WWB7 406 aa5.84□□□□□ -1.47
CCDC60-204ENST00000539847 DLX4Q92988 240 aaPredicted RBP5.84□□□□□ -1.47
CCDC60-204ENST00000539847 C18orf15Q96N68 181 aa5.84□□□□□ -1.47
CCDC60-204ENST00000539847 SLC50A1Q9BRV3 221 aa5.84□□□□□ -1.47
CCDC60-204ENST00000539847 C1QTNF4Q9BXJ3 329 aa5.84□□□□□ -1.47
CCDC60-204ENST00000539847 FBXL15Q9H469 300 aa5.84□□□□□ -1.47
CCDC60-204ENST00000539847 CTSZQ9UBR2 303 aa5.84□□□□□ -1.47
CCDC60-204ENST00000539847 DSCAML1Q8TD84 2053 aa5.84□□□□□ -1.47
CCDC60-204ENST00000539847 WNK1Q9H4A3 2382 aa5.84□□□□□ -1.48
CCDC60-204ENST00000539847 IGHV3-21A0A0B4J1V1 117 aa5.83□□□□□ -1.48
CCDC60-204ENST00000539847 TRAV40A0A0B4J280 105 aa5.83□□□□□ -1.48
CCDC60-204ENST00000539847 LYNX1G3V0Z9 82 aa5.83□□□□□ -1.48
CCDC60-204ENST00000539847 SMKR1H3BMG3 65 aa5.83□□□□□ -1.48
CCDC60-204ENST00000539847 M0R381 172 aa5.83□□□□□ -1.48
CCDC60-204ENST00000539847 NBR2O15453 112 aa5.83□□□□□ -1.48
CCDC60-204ENST00000539847 ORM1P02763 201 aa5.83□□□□□ -1.48
CCDC60-204ENST00000539847 LYNX1P0DP58 116 aa5.83□□□□□ -1.48
CCDC60-204ENST00000539847 PRTN3P24158 256 aa5.83□□□□□ -1.48
CCDC60-204ENST00000539847 CNTFRP26992 372 aa5.83□□□□□ -1.48
CCDC60-204ENST00000539847 ZNF80P51504 273 aaPredicted RBP5.83□□□□□ -1.48
CCDC60-204ENST00000539847 UBE2D1P51668 147 aa5.83□□□□□ -1.48
CCDC60-204ENST00000539847 CFAP126Q5VTH2 177 aa5.83□□□□□ -1.48
CCDC60-204ENST00000539847 Q8N3U1 123 aa5.83□□□□□ -1.48
CCDC60-204ENST00000539847 MAPKAPK5-AS1Q8N8E1 139 aa5.83□□□□□ -1.48
CCDC60-204ENST00000539847 PPDPFLQ8WWR9 84 aa5.83□□□□□ -1.48
CCDC60-204ENST00000539847 TIMD4Q96H15 378 aa5.83□□□□□ -1.48
CCDC60-204ENST00000539847 C21orf62Q9NYP8 219 aa5.83□□□□□ -1.48
CCDC60-204ENST00000539847 MRPL35Q9NZE8 188 aaKnown RBP5.83□□□□□ -1.48
CCDC60-204ENST00000539847 DPM3Q9P2X0 92 aa5.83□□□□□ -1.48
CCDC60-204ENST00000539847 TMSB15BA0A087X1C1 80 aa5.82□□□□□ -1.48
CCDC60-204ENST00000539847 IGHV3-72A0A0B4J1Y9 119 aa5.82□□□□□ -1.48
CCDC60-204ENST00000539847 SPRY2O43597 315 aa5.82□□□□□ -1.48
CCDC60-204ENST00000539847 APOMO95445 188 aa5.82□□□□□ -1.48
CCDC60-204ENST00000539847 ELANEP08246 267 aa5.82□□□□□ -1.48
CCDC60-204ENST00000539847 UBE2D3P61077 147 aa5.82□□□□□ -1.48
CCDC60-204ENST00000539847 UBE2D2P62837 147 aa5.82□□□□□ -1.48
CCDC60-204ENST00000539847 EBI3Q14213 229 aa5.82□□□□□ -1.48
CCDC60-204ENST00000539847 C5orf64Q2M2E5 130 aa5.82□□□□□ -1.48
CCDC60-204ENST00000539847 MORN3Q6PF18 240 aaPredicted RBP5.82□□□□□ -1.48
CCDC60-204ENST00000539847 CCL17Q92583 94 aa5.82□□□□□ -1.48
CCDC60-204ENST00000539847 TOMM6Q96B49 74 aa5.82□□□□□ -1.48
CCDC60-204ENST00000539847 ESM1Q9NQ30 184 aa5.82□□□□□ -1.48
CCDC60-204ENST00000539847 SMAD5-AS1Q9Y6J3 95 aa5.82□□□□□ -1.48
CCDC60-204ENST00000539847 VWFP04275 2813 aa5.82□□□□□ -1.48
CCDC60-204ENST00000539847 TANC2Q9HCD6 1990 aa5.82□□□□□ -1.48
CCDC60-204ENST00000539847 IGKV2-40A0A087WW87 121 aaPredicted RBP5.81□□□□□ -1.48
CCDC60-204ENST00000539847 IGHV1-69DA0A0B4J2H0 117 aa5.81□□□□□ -1.48
CCDC60-204ENST00000539847 A8MZ25 164 aa5.81□□□□□ -1.48
CCDC60-204ENST00000539847 K7ERJ3 54 aa5.81□□□□□ -1.48
CCDC60-204ENST00000539847 M0R1W7 72 aa5.81□□□□□ -1.48
CCDC60-204ENST00000539847 TSPAN13O95857 204 aa5.81□□□□□ -1.48
CCDC60-204ENST00000539847 IGKV2D-40P01614 121 aaPredicted RBP5.81□□□□□ -1.48
CCDC60-204ENST00000539847 ASIPP42127 132 aa5.81□□□□□ -1.48
CCDC60-204ENST00000539847 ERCC8Q13216 396 aa5.81□□□□□ -1.48
CCDC60-204ENST00000539847 C9orf47Q6ZRZ4 202 aa5.81□□□□□ -1.48
CCDC60-204ENST00000539847 SH2D6Q7Z4S9 175 aa5.81□□□□□ -1.48
CCDC60-204ENST00000539847 POM121L12Q8N7R1 296 aa5.81□□□□□ -1.48
CCDC60-204ENST00000539847 NEXN-AS1Q8NBZ9 246 aa5.81□□□□□ -1.48
CCDC60-204ENST00000539847 GEMIN7Q9H840 131 aaKnown RBP5.81□□□□□ -1.48
CCDC60-204ENST00000539847 IGKV3D-20A0A0C4DH25 116 aa5.8□□□□□ -1.48
CCDC60-204ENST00000539847 TRBV7-9A0A0J9YWB2 115 aa5.8□□□□□ -1.48
CCDC60-204ENST00000539847 CTSGP08311 255 aa5.8□□□□□ -1.48
CCDC60-204ENST00000539847 FXYD7P58549 80 aa5.8□□□□□ -1.48
CCDC60-204ENST00000539847 C9orf139Q6ZV77 190 aa5.8□□□□□ -1.48
CCDC60-204ENST00000539847 TEN1Q86WV5 123 aa5.8□□□□□ -1.48
CCDC60-204ENST00000539847 SMIM2Q9BVW6 85 aa5.8□□□□□ -1.48
CCDC60-204ENST00000539847 MSRB1Q9NZV6 116 aa5.8□□□□□ -1.48
CCDC60-204ENST00000539847 PEMTQ9UBM1 199 aa5.8□□□□□ -1.48
CCDC60-204ENST00000539847 PRKDCP78527 4128 aaKnown RBP5.79□□□□□ -1.48
CCDC60-204ENST00000539847 TIMM23O14925 209 aa5.79□□□□□ -1.48
CCDC60-204ENST00000539847 BUB3O43684 328 aa5.79□□□□□ -1.48
CCDC60-204ENST00000539847 LGALS1P09382 135 aaKnown RBP5.79□□□□□ -1.48
CCDC60-204ENST00000539847 CD7P09564 240 aa5.79□□□□□ -1.48
CCDC60-204ENST00000539847 SPINK8P0C7L1 97 aa5.79□□□□□ -1.48
CCDC60-204ENST00000539847 TMEM78Q5T7P6 136 aa5.79□□□□□ -1.48
CCDC60-204ENST00000539847 MINOS1Q5TGZ0 78 aa5.79□□□□□ -1.48
CCDC60-204ENST00000539847 Q6Q795 121 aa5.79□□□□□ -1.48
CCDC60-204ENST00000539847 Q8N6K4 173 aa5.79□□□□□ -1.48
CCDC60-204ENST00000539847 SCGB3A1Q96QR1 104 aa5.79□□□□□ -1.48
CCDC60-204ENST00000539847 SPANXDQ9BXN6 97 aa5.79□□□□□ -1.48
CCDC60-204ENST00000539847 ERG28Q9UKR5 140 aa5.79□□□□□ -1.48
CCDC60-204ENST00000539847 MINOS1-NBL1R4GNA1 71 aa5.79□□□□□ -1.48
CCDC60-204ENST00000539847 IGHV4OR15-8A0A075B7B6 117 aa5.78□□□□□ -1.48
CCDC60-204ENST00000539847 TRAV26-1A0A087WT03 109 aa5.78□□□□□ -1.48
CCDC60-204ENST00000539847 A0A087WW49 117 aa5.78□□□□□ -1.48
CCDC60-204ENST00000539847 IGHV7-4-1A0A0J9YVY3 117 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms