RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 ZC2HC1AQ96GY0 325 aa10.19□□□□□ -0.78
UBE3B-211ENST00000539843 GRIFINA4D1Z8 144 aa10.18□□□□□ -0.78
UBE3B-211ENST00000539843 ARPC5O15511 151 aa10.18□□□□□ -0.78
UBE3B-211ENST00000539843 FHITP49789 147 aa10.18□□□□□ -0.78
UBE3B-211ENST00000539843 RPL36AP83881 106 aaKnown RBP10.18□□□□□ -0.78
UBE3B-211ENST00000539843 C14orf178Q8N769 122 aaPredicted RBP10.18□□□□□ -0.78
UBE3B-211ENST00000539843 RPL36ALQ969Q0 106 aaKnown RBP10.18□□□□□ -0.78
UBE3B-211ENST00000539843 CHCHD7Q9BUK0 85 aa10.18□□□□□ -0.78
UBE3B-211ENST00000539843 DMBT1Q9UGM3 2413 aaPredicted RBP10.17□□□□□ -0.78
UBE3B-211ENST00000539843 IGKV2D-24A0A075B6R9 120 aa10.17□□□□□ -0.78
UBE3B-211ENST00000539843 TRBV10-1A0A0K0K1A3 114 aa10.17□□□□□ -0.78
UBE3B-211ENST00000539843 PLA2G1BP04054 148 aaKnown RBP10.17□□□□□ -0.78
UBE3B-211ENST00000539843 HAMPP81172 84 aa10.17□□□□□ -0.78
UBE3B-211ENST00000539843 LINC01559Q495D7 138 aa10.17□□□□□ -0.78
UBE3B-211ENST00000539843 UFSP1Q6NVU6 142 aa10.17□□□□□ -0.78
UBE3B-211ENST00000539843 COX8CQ7Z4L0 72 aa10.17□□□□□ -0.78
UBE3B-211ENST00000539843 DAZ4Q86SG3 579 aaKnown RBP10.17□□□□□ -0.78
UBE3B-211ENST00000539843 Q8N976 141 aa10.17□□□□□ -0.78
UBE3B-211ENST00000539843 SFRP2Q96HF1 295 aa10.17□□□□□ -0.78
UBE3B-211ENST00000539843 SAMD10Q9BYL1 202 aa10.17□□□□□ -0.78
UBE3B-211ENST00000539843 JPT2Q9H910 190 aa10.17□□□□□ -0.78
UBE3B-211ENST00000539843 DAZ3Q9NR90 486 aaKnown RBP10.17□□□□□ -0.78
UBE3B-211ENST00000539843 A0A087WWL8 130 aa10.16□□□□□ -0.78
UBE3B-211ENST00000539843 TMSB15BA0A087X1C1 80 aa10.16□□□□□ -0.78
UBE3B-211ENST00000539843 TRBV6-1A0A0K0K1D8 114 aa10.16□□□□□ -0.78
UBE3B-211ENST00000539843 PFDN1O60925 122 aa10.16□□□□□ -0.78
UBE3B-211ENST00000539843 S100A9P06702 114 aaKnown RBP10.16□□□□□ -0.78
UBE3B-211ENST00000539843 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.15□□□□□ -0.78
UBE3B-211ENST00000539843 RBFOX3A6NFN3 312 aa10.15□□□□□ -0.78
UBE3B-211ENST00000539843 LECT2O14960 151 aa10.15□□□□□ -0.78
UBE3B-211ENST00000539843 LTAP01374 205 aa10.15□□□□□ -0.78
UBE3B-211ENST00000539843 PKIAP61925 76 aa10.15□□□□□ -0.78
UBE3B-211ENST00000539843 ZNF674Q2M3X9 581 aa10.15□□□□□ -0.78
UBE3B-211ENST00000539843 RGS21Q2M5E4 152 aa10.15□□□□□ -0.78
UBE3B-211ENST00000539843 NIT1Q86X76 327 aa10.15□□□□□ -0.78
UBE3B-211ENST00000539843 TRBV7-3A0A075B6L6 115 aa10.14□□□□□ -0.79
UBE3B-211ENST00000539843 J3QL48 77 aa10.14□□□□□ -0.79
UBE3B-211ENST00000539843 CRPP02741 224 aa10.14□□□□□ -0.79
UBE3B-211ENST00000539843 CRIP1P50238 77 aa10.14□□□□□ -0.79
UBE3B-211ENST00000539843 Q0VG73 95 aa10.14□□□□□ -0.79
UBE3B-211ENST00000539843 Q8N3U1 123 aa10.14□□□□□ -0.79
UBE3B-211ENST00000539843 UBE2WQ96B02 151 aa10.14□□□□□ -0.79
UBE3B-211ENST00000539843 KLK12Q9UKR0 248 aa10.14□□□□□ -0.79
UBE3B-211ENST00000539843 UMAD1C9J7I0 102 aa10.13□□□□□ -0.79
UBE3B-211ENST00000539843 TMEM262E9PQX1 116 aa10.13□□□□□ -0.79
UBE3B-211ENST00000539843 ZNF56Q15929 161 aa10.13□□□□□ -0.79
UBE3B-211ENST00000539843 C14orf177Q52M58 125 aa10.13□□□□□ -0.79
UBE3B-211ENST00000539843 BAALCQ8WXS3 180 aa10.13□□□□□ -0.79
UBE3B-211ENST00000539843 EIF5AP63241 154 aaKnown RBP10.12□□□□□ -0.79
UBE3B-211ENST00000539843 SFT2D1Q8WV19 159 aa10.12□□□□□ -0.79
UBE3B-211ENST00000539843 C1orf43Q9BWL3 253 aa10.12□□□□□ -0.79
UBE3B-211ENST00000539843 ZNF471Q9BX82 626 aaPredicted RBP10.12□□□□□ -0.79
UBE3B-211ENST00000539843 PAGE4O60829 102 aa10.11□□□□□ -0.79
UBE3B-211ENST00000539843 CXCL1P09341 107 aa10.11□□□□□ -0.79
UBE3B-211ENST00000539843 SMIM17P0DL12 118 aa10.11□□□□□ -0.79
UBE3B-211ENST00000539843 RAB4BP61018 213 aa10.11□□□□□ -0.79
UBE3B-211ENST00000539843 UBE2D3P61077 147 aa10.11□□□□□ -0.79
UBE3B-211ENST00000539843 UBE2D2P62837 147 aa10.11□□□□□ -0.79
UBE3B-211ENST00000539843 WFDC2Q14508 124 aa10.11□□□□□ -0.79
UBE3B-211ENST00000539843 TMEM97Q5BJF2 176 aa10.11□□□□□ -0.79
UBE3B-211ENST00000539843 SPANXN1Q5VSR9 72 aa10.11□□□□□ -0.79
UBE3B-211ENST00000539843 FAM213BQ8TBF2 198 aa10.11□□□□□ -0.79
UBE3B-211ENST00000539843 FAM30AQ9NZY2 134 aa10.11□□□□□ -0.79
UBE3B-211ENST00000539843 KANTRA0A1W2PQU2 76 aa10.1□□□□□ -0.79
UBE3B-211ENST00000539843 ZNF345Q14585 488 aa10.1□□□□□ -0.79
UBE3B-211ENST00000539843 BAGE2Q86Y30 109 aa10.1□□□□□ -0.79
UBE3B-211ENST00000539843 LINC00528Q8N1L1 170 aa10.1□□□□□ -0.79
UBE3B-211ENST00000539843 CYTL1Q9NRR1 136 aa10.1□□□□□ -0.79
UBE3B-211ENST00000539843 Q9UF83 564 aa10.1□□□□□ -0.79
UBE3B-211ENST00000539843 F5H697 171 aa10.09□□□□□ -0.79
UBE3B-211ENST00000539843 Q6ZSA8 131 aa10.09□□□□□ -0.79
UBE3B-211ENST00000539843 OR10G8Q8NGN5 311 aa10.09□□□□□ -0.79
UBE3B-211ENST00000539843 FAT1Q14517 4588 aa10.08□□□□□ -0.8
UBE3B-211ENST00000539843 TRBV6-8A0A0A6YYG3 113 aa10.08□□□□□ -0.8
UBE3B-211ENST00000539843 A0A1B0GV50 99 aa10.08□□□□□ -0.8
UBE3B-211ENST00000539843 PRR27Q6MZM9 219 aa10.08□□□□□ -0.8
UBE3B-211ENST00000539843 KCNRGQ8N5I3 272 aa10.08□□□□□ -0.8
UBE3B-211ENST00000539843 DEFB104AQ8WTQ1 72 aa10.08□□□□□ -0.8
UBE3B-211ENST00000539843 CHCHD5Q9BSY4 110 aa10.08□□□□□ -0.8
UBE3B-211ENST00000539843 A0A0D9SG52 128 aa10.07□□□□□ -0.8
UBE3B-211ENST00000539843 ANGP03950 147 aaKnown RBP10.07□□□□□ -0.8
UBE3B-211ENST00000539843 H2AFB1P0C5Y9 115 aa10.07□□□□□ -0.8
UBE3B-211ENST00000539843 OR10AG1Q8NH19 301 aa10.07□□□□□ -0.8
UBE3B-211ENST00000539843 MBD3L1Q8WWY6 194 aa10.07□□□□□ -0.8
UBE3B-211ENST00000539843 AP1S3Q96PC3 154 aa10.07□□□□□ -0.8
UBE3B-211ENST00000539843 SCO2A0A1W2PP80 73 aa10.06□□□□□ -0.8
UBE3B-211ENST00000539843 G3V3Q6 166 aa10.06□□□□□ -0.8
UBE3B-211ENST00000539843 TEX46H3BTG2 121 aa10.06□□□□□ -0.8
UBE3B-211ENST00000539843 OR5AL1P0C617 328 aa10.06□□□□□ -0.8
UBE3B-211ENST00000539843 RPL19P84098 196 aaKnown RBP10.06□□□□□ -0.8
UBE3B-211ENST00000539843 ATRAIDQ6UW56 229 aa10.06□□□□□ -0.8
UBE3B-211ENST00000539843 C15orf54Q8N8G6 183 aa10.06□□□□□ -0.8
UBE3B-211ENST00000539843 NEXN-AS1Q8NBZ9 246 aa10.06□□□□□ -0.8
UBE3B-211ENST00000539843 SNAI2O43623 268 aa10.05□□□□□ -0.8
UBE3B-211ENST00000539843 MIAQ16674 131 aa10.05□□□□□ -0.8
UBE3B-211ENST00000539843 DAZAP1Q96EP5 407 aaKnown RBP10.05□□□□□ -0.8
UBE3B-211ENST00000539843 MANBALQ9NQG1 85 aa10.05□□□□□ -0.8
UBE3B-211ENST00000539843 FLG2Q5D862 2391 aaPredicted RBP10.05□□□□□ -0.8
UBE3B-211ENST00000539843 VPS13BQ7Z7G8 4022 aa10.04□□□□□ -0.8
UBE3B-211ENST00000539843 HMSDA8MTL9 139 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms