RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 NUP210Q8TEM1 1887 aaPredicted RBP5.33□□□□□ -1.56
SORT1-209ENST00000538502 C5orf38Q86SI9 138 aa5.33□□□□□ -1.56
SORT1-209ENST00000538502 SPRY4Q9C004 299 aa5.33□□□□□ -1.56
SORT1-209ENST00000538502 C14orf132Q9NPU4 83 aa5.33□□□□□ -1.56
SORT1-209ENST00000538502 IGHV7-81A0A0B4J1V7 117 aa5.33□□□□□ -1.56
SORT1-209ENST00000538502 RPL39P62891 51 aaKnown RBP5.33□□□□□ -1.56
SORT1-209ENST00000538502 KIAA2026Q5HYC2 2103 aa5.33□□□□□ -1.56
SORT1-209ENST00000538502 TMEM223A0PJW6 202 aa5.32□□□□□ -1.56
SORT1-209ENST00000538502 COX7CP15954 63 aa5.32□□□□□ -1.56
SORT1-209ENST00000538502 PRR30Q53SZ7 412 aaPredicted RBP5.32□□□□□ -1.56
SORT1-209ENST00000538502 RPL18AQ02543 176 aaKnown RBP5.32□□□□□ -1.56
SORT1-209ENST00000538502 FAM222AQ5U5X8 452 aa5.32□□□□□ -1.56
SORT1-209ENST00000538502 MBD6Q96DN6 1003 aa5.32□□□□□ -1.56
SORT1-209ENST00000538502 HEATR5AQ86XA9 2040 aa5.32□□□□□ -1.56
SORT1-209ENST00000538502 VPREB3Q9UKI3 123 aa5.32□□□□□ -1.56
SORT1-209ENST00000538502 NCKAP5O14513 1909 aa5.32□□□□□ -1.56
SORT1-209ENST00000538502 BPY2O14599 106 aa5.32□□□□□ -1.56
SORT1-209ENST00000538502 TIRAPP58753 221 aa5.32□□□□□ -1.56
SORT1-209ENST00000538502 MIR7-3HGQ8N6C7 128 aa5.32□□□□□ -1.56
SORT1-209ENST00000538502 TRAV23DV6A0A075B6W5 121 aa5.32□□□□□ -1.56
SORT1-209ENST00000538502 WISP1O95388 367 aa5.32□□□□□ -1.56
SORT1-209ENST00000538502 GPHB5Q86YW7 130 aa5.32□□□□□ -1.56
SORT1-209ENST00000538502 MLST8Q9BVC4 326 aa5.32□□□□□ -1.56
SORT1-209ENST00000538502 TEX49A0A1B0GTD5 131 aa5.31□□□□□ -1.56
SORT1-209ENST00000538502 NCR3O14931 201 aa5.31□□□□□ -1.56
SORT1-209ENST00000538502 PLXNB3Q9ULL4 1909 aa5.31□□□□□ -1.56
SORT1-209ENST00000538502 PHF3Q92576 2039 aaKnown RBP5.31□□□□□ -1.56
SORT1-209ENST00000538502 TTTY13Q9BZ97 58 aa5.31□□□□□ -1.56
SORT1-209ENST00000538502 CTSZQ9UBR2 303 aa5.31□□□□□ -1.56
SORT1-209ENST00000538502 HELZP42694 1942 aaKnown RBP5.31□□□□□ -1.56
SORT1-209ENST00000538502 PLXND1Q9Y4D7 1925 aa5.31□□□□□ -1.56
SORT1-209ENST00000538502 IGKV2D-24A0A075B6R9 120 aa5.31□□□□□ -1.56
SORT1-209ENST00000538502 C20orf197Q8N268 126 aa5.31□□□□□ -1.56
SORT1-209ENST00000538502 FAM186AA6NE01 2351 aa5.31□□□□□ -1.56
SORT1-209ENST00000538502 TCF20Q9UGU0 1960 aaKnown RBP5.31□□□□□ -1.56
SORT1-209ENST00000538502 CLPSL2Q6UWE3 100 aa5.31□□□□□ -1.56
SORT1-209ENST00000538502 TICRRQ7Z2Z1 1910 aa5.31□□□□□ -1.56
SORT1-209ENST00000538502 LY6G6EA0A0G2JKS1 128 aa5.3□□□□□ -1.56
SORT1-209ENST00000538502 GYPEP15421 78 aa5.3□□□□□ -1.56
SORT1-209ENST00000538502 CFAP126Q5VTH2 177 aa5.3□□□□□ -1.56
SORT1-209ENST00000538502 ODF3L1Q8IXM7 274 aa5.3□□□□□ -1.56
SORT1-209ENST00000538502 FANCD2OSQ96PS1 177 aa5.3□□□□□ -1.56
SORT1-209ENST00000538502 U3KQA8 63 aa5.3□□□□□ -1.56
SORT1-209ENST00000538502 GNLYP22749 145 aa5.3□□□□□ -1.56
SORT1-209ENST00000538502 MGAMO43451 1857 aa5.3□□□□□ -1.56
SORT1-209ENST00000538502 TNRC6BQ9UPQ9 1833 aaKnown RBP5.3□□□□□ -1.56
SORT1-209ENST00000538502 A0A0J9YY99 117 aa5.3□□□□□ -1.56
SORT1-209ENST00000538502 WT1P19544 449 aaPredicted RBP5.3□□□□□ -1.56
SORT1-209ENST00000538502 DAND5Q8N907 189 aa5.3□□□□□ -1.56
SORT1-209ENST00000538502 GDF5OSQ5U4N7 250 aa5.3□□□□□ -1.56
SORT1-209ENST00000538502 UFSP1Q6NVU6 142 aa5.3□□□□□ -1.56
SORT1-209ENST00000538502 C5orf56Q8N8D9 126 aa5.3□□□□□ -1.56
SORT1-209ENST00000538502 LINC00574Q9H8X3 128 aa5.3□□□□□ -1.56
SORT1-209ENST00000538502 DEFB121Q5J5C9 76 aa5.3□□□□□ -1.56
SORT1-209ENST00000538502 SDIM1Q6ZPB5 146 aa5.3□□□□□ -1.56
SORT1-209ENST00000538502 MYO7BQ6PIF6 2116 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 IGKV1OR2-108A0A075B7D4 117 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 K7ENP7 123 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 C9orf66Q5T8R8 295 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 Q6ZQT7 251 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 FAM110AQ9BQ89 295 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 CLPSL1A2RUU4 121 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 IBA57-AS1B1ANH7 110 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 SPART-AS1P0CW21 52 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 BLCAPP62952 87 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 C1orf195Q5TG92 126 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 SDK2Q58EX2 2172 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 IGHV3-33P01772 117 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 Q6JHZ5 121 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 TET1Q8NFU7 2136 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 ZNF106Q9H2Y7 1883 aaKnown RBP5.29□□□□□ -1.56
SORT1-209ENST00000538502 SMIM26A0A096LP01 95 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 LY6HO94772 140 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 C3orf56Q8N813 242 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 Q8N9W7 124 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 AJUBAQ96IF1 538 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 IGHV4-28A0A0C4DH34 117 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 PRSS33Q8NF86 280 aa5.29□□□□□ -1.56
SORT1-209ENST00000538502 IGKV1D-37A0A075B6S9 117 aa5.28□□□□□ -1.56
SORT1-209ENST00000538502 A0A0J9YX75 114 aa5.28□□□□□ -1.56
SORT1-209ENST00000538502 PRAC2D3DTV9 90 aa5.28□□□□□ -1.56
SORT1-209ENST00000538502 CCL24O00175 119 aa5.28□□□□□ -1.56
SORT1-209ENST00000538502 SERP1Q9Y6X1 66 aa5.28□□□□□ -1.56
SORT1-209ENST00000538502 ANAPC1Q9H1A4 1944 aa5.28□□□□□ -1.56
SORT1-209ENST00000538502 TRIAP1O43715 76 aa5.28□□□□□ -1.56
SORT1-209ENST00000538502 SPAG11BQ08648 103 aa5.28□□□□□ -1.56
SORT1-209ENST00000538502 TMEM263Q8WUH6 116 aaKnown RBP5.28□□□□□ -1.56
SORT1-209ENST00000538502 Q9HAA7 133 aa5.28□□□□□ -1.56
SORT1-209ENST00000538502 TP53TG3Q9ULZ0 132 aa5.28□□□□□ -1.56
SORT1-209ENST00000538502 PYGO1Q9Y3Y4 419 aa5.28□□□□□ -1.56
SORT1-209ENST00000538502 FAM215AQ9Y5M1 114 aa5.28□□□□□ -1.56
SORT1-209ENST00000538502 FRMD6-AS1P0C7T7 363 aa5.28□□□□□ -1.56
SORT1-209ENST00000538502 LY6DQ14210 128 aa5.28□□□□□ -1.56
SORT1-209ENST00000538502 HHLA3Q9XRX5 114 aa5.28□□□□□ -1.56
SORT1-209ENST00000538502 IGHV3-30P01768 117 aa5.28□□□□□ -1.56
SORT1-209ENST00000538502 IGHV3-30-5P0DP03 117 aa5.28□□□□□ -1.56
SORT1-209ENST00000538502 PIK3CD-AS1Q5SR53 167 aa5.28□□□□□ -1.56
SORT1-209ENST00000538502 C2orf91Q6ZV80 131 aa5.28□□□□□ -1.56
SORT1-209ENST00000538502 MPLKIPQ8TAP9 179 aa5.28□□□□□ -1.56
SORT1-209ENST00000538502 PI4KAP42356 2102 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms