RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 OVOL2Q9BRP0 275 aa5.25□□□□□ -1.57
MSH6-209ENST00000538136 LOC105371267A0A1B0GV96 52 aa5.25□□□□□ -1.57
MSH6-209ENST00000538136 TRGC2P03986 189 aa5.25□□□□□ -1.57
MSH6-209ENST00000538136 CEMP1Q6PRD7 247 aaPredicted RBP5.25□□□□□ -1.57
MSH6-209ENST00000538136 VSIG2Q96IQ7 327 aa5.25□□□□□ -1.57
MSH6-209ENST00000538136 K7EN84 100 aa5.24□□□□□ -1.57
MSH6-209ENST00000538136 CRISP2P16562 243 aa5.24□□□□□ -1.57
MSH6-209ENST00000538136 RAB5BP61020 215 aa5.24□□□□□ -1.57
MSH6-209ENST00000538136 HBBP68871 147 aa5.24□□□□□ -1.57
MSH6-209ENST00000538136 C19orf54Q5BKX5 351 aa5.24□□□□□ -1.57
MSH6-209ENST00000538136 TMEM263Q8WUH6 116 aaKnown RBP5.24□□□□□ -1.57
MSH6-209ENST00000538136 LINC00526Q96FQ7 95 aa5.24□□□□□ -1.57
MSH6-209ENST00000538136 ZNF625Q96I27 306 aaPredicted RBP5.24□□□□□ -1.57
MSH6-209ENST00000538136 XCL1P47992 114 aa5.24□□□□□ -1.57
MSH6-209ENST00000538136 DPH3P1Q9H4G8 78 aa5.24□□□□□ -1.57
MSH6-209ENST00000538136 ST20Q9HBF5 79 aa5.24□□□□□ -1.57
MSH6-209ENST00000538136 CRXO43186 299 aaPredicted RBP5.24□□□□□ -1.57
MSH6-209ENST00000538136 AMBPP02760 352 aa5.24□□□□□ -1.57
MSH6-209ENST00000538136 RBMY1A1P0DJD3 496 aaKnown RBP5.24□□□□□ -1.57
MSH6-209ENST00000538136 RBMY1CP0DJD4 496 aa5.24□□□□□ -1.57
MSH6-209ENST00000538136 MALP21145 153 aa5.24□□□□□ -1.57
MSH6-209ENST00000538136 RPS20P60866 119 aaKnown RBP5.24□□□□□ -1.57
MSH6-209ENST00000538136 RBMY1FQ15415 496 aaKnown RBP5.24□□□□□ -1.57
MSH6-209ENST00000538136 MRPL18Q9H0U6 180 aaKnown RBP5.24□□□□□ -1.57
MSH6-209ENST00000538136 TRAV8-6A0A0B4J262 113 aa5.23□□□□□ -1.57
MSH6-209ENST00000538136 H7C1H1 209 aa5.23□□□□□ -1.57
MSH6-209ENST00000538136 BEAN1Q3B7T3 259 aa5.23□□□□□ -1.57
MSH6-209ENST00000538136 RNF152Q8N8N0 203 aa5.23□□□□□ -1.57
MSH6-209ENST00000538136 ATP6V0E2Q8NHE4 81 aa5.23□□□□□ -1.57
MSH6-209ENST00000538136 PACRGQ96M98 296 aaPredicted RBP5.23□□□□□ -1.57
MSH6-209ENST00000538136 COL7A1Q02388 2944 aa5.23□□□□□ -1.57
MSH6-209ENST00000538136 SDHAF1A6NFY7 115 aa5.23□□□□□ -1.57
MSH6-209ENST00000538136 CIDEAO60543 219 aa5.23□□□□□ -1.57
MSH6-209ENST00000538136 Q6ZN92 141 aa5.23□□□□□ -1.57
MSH6-209ENST00000538136 Q6ZWC4 215 aa5.23□□□□□ -1.57
MSH6-209ENST00000538136 MUC7Q8TAX7 377 aa5.23□□□□□ -1.57
MSH6-209ENST00000538136 TMEM242Q9NWH2 141 aa5.23□□□□□ -1.57
MSH6-209ENST00000538136 PPP1R2P9O14990 202 aa5.23□□□□□ -1.57
MSH6-209ENST00000538136 S100A9P06702 114 aaKnown RBP5.23□□□□□ -1.57
MSH6-209ENST00000538136 MIFP14174 115 aa5.23□□□□□ -1.57
MSH6-209ENST00000538136 ZNF493Q6ZR52 646 aa5.23□□□□□ -1.57
MSH6-209ENST00000538136 ATOH7Q8N100 152 aa5.23□□□□□ -1.57
MSH6-209ENST00000538136 MRPL23Q16540 153 aaKnown RBP5.23□□□□□ -1.57
MSH6-209ENST00000538136 MYOZ3Q8TDC0 251 aa5.23□□□□□ -1.57
MSH6-209ENST00000538136 Q9UF83 564 aa5.23□□□□□ -1.57
MSH6-209ENST00000538136 SCGB1D1O95968 90 aa5.22□□□□□ -1.57
MSH6-209ENST00000538136 CRIP1P50238 77 aa5.22□□□□□ -1.57
MSH6-209ENST00000538136 PNRC1Q12796 327 aaPredicted RBP5.22□□□□□ -1.57
MSH6-209ENST00000538136 TMEM256Q8N2U0 113 aa5.22□□□□□ -1.57
MSH6-209ENST00000538136 TMEM101Q96IK0 257 aa5.22□□□□□ -1.57
MSH6-209ENST00000538136 GEMIN7Q9H840 131 aaKnown RBP5.22□□□□□ -1.57
MSH6-209ENST00000538136 ZNF324O75467 553 aaPredicted RBP5.22□□□□□ -1.57
MSH6-209ENST00000538136 TMEM170BQ5T4T1 132 aa5.22□□□□□ -1.57
MSH6-209ENST00000538136 ZNF705AQ6ZN79 300 aaPredicted RBP5.22□□□□□ -1.57
MSH6-209ENST00000538136 C9orf47Q6ZRZ4 202 aa5.22□□□□□ -1.57
MSH6-209ENST00000538136 SLC25A29Q8N8R3 303 aa5.22□□□□□ -1.57
MSH6-209ENST00000538136 MAP1LC3AQ9H492 121 aa5.22□□□□□ -1.57
MSH6-209ENST00000538136 PRO0255Q9UI72 69 aa5.22□□□□□ -1.57
MSH6-209ENST00000538136 ICOSQ9Y6W8 199 aa5.22□□□□□ -1.57
MSH6-209ENST00000538136 UBE2CO00762 179 aa5.22□□□□□ -1.57
MSH6-209ENST00000538136 WIPF1O43516 503 aa5.22□□□□□ -1.57
MSH6-209ENST00000538136 C5orf38Q86SI9 138 aa5.22□□□□□ -1.57
MSH6-209ENST00000538136 TSKUQ8WUA8 353 aa5.22□□□□□ -1.57
MSH6-209ENST00000538136 HAMPP81172 84 aa5.21□□□□□ -1.57
MSH6-209ENST00000538136 TRAV10A0A0B4J240 114 aa5.21□□□□□ -1.58
MSH6-209ENST00000538136 G0S2P27469 103 aa5.21□□□□□ -1.58
MSH6-209ENST00000538136 DAZ2Q13117 558 aaKnown RBP5.21□□□□□ -1.58
MSH6-209ENST00000538136 DAZ4Q86SG3 579 aaKnown RBP5.21□□□□□ -1.58
MSH6-209ENST00000538136 B9D2Q9BPU9 175 aa5.21□□□□□ -1.58
MSH6-209ENST00000538136 DAZ3Q9NR90 486 aaKnown RBP5.21□□□□□ -1.58
MSH6-209ENST00000538136 IL36BQ9NZH7 164 aa5.21□□□□□ -1.58
MSH6-209ENST00000538136 DKK2Q9UBU2 259 aa5.21□□□□□ -1.58
MSH6-209ENST00000538136 ZNF580Q9UK33 172 aa5.21□□□□□ -1.58
MSH6-209ENST00000538136 RHOHQ15669 191 aa5.21□□□□□ -1.58
MSH6-209ENST00000538136 ZC2HC1BQ5TFG8 222 aa5.21□□□□□ -1.58
MSH6-209ENST00000538136 ORMDL3Q8N138 153 aa5.21□□□□□ -1.58
MSH6-209ENST00000538136 WWC2-AS2Q96NR7 200 aa5.21□□□□□ -1.58
MSH6-209ENST00000538136 SEC11CQ9BY50 192 aa5.21□□□□□ -1.58
MSH6-209ENST00000538136 IGHV4-4A0A075B6R2 117 aa5.2□□□□□ -1.58
MSH6-209ENST00000538136 A8MWV9 139 aa5.2□□□□□ -1.58
MSH6-209ENST00000538136 SLAQ13239 276 aa5.2□□□□□ -1.58
MSH6-209ENST00000538136 OR2K2Q8NGT1 345 aa5.2□□□□□ -1.58
MSH6-209ENST00000538136 ANAPC16Q96DE5 110 aa5.2□□□□□ -1.58
MSH6-209ENST00000538136 IGKV2-24A0A0C4DH68 120 aa5.2□□□□□ -1.58
MSH6-209ENST00000538136 LINC01620Q4KN68 170 aa5.2□□□□□ -1.58
MSH6-209ENST00000538136 OPRPNQ99935 248 aaPredicted RBP5.2□□□□□ -1.58
MSH6-209ENST00000538136 KIR2DL5BA0A0G2JN68 375 aa5.2□□□□□ -1.58
MSH6-209ENST00000538136 KIR2DL5BA0A0G2JPC4 375 aa5.2□□□□□ -1.58
MSH6-209ENST00000538136 SNAI2O43623 268 aa5.2□□□□□ -1.58
MSH6-209ENST00000538136 PRSS2P07478 247 aa5.2□□□□□ -1.58
MSH6-209ENST00000538136 KIR2DL5AQ8N109 375 aa5.2□□□□□ -1.58
MSH6-209ENST00000538136 ARL6IP6Q8N6S5 226 aa5.2□□□□□ -1.58
MSH6-209ENST00000538136 KIR2DL5BQ8NHK3 375 aa5.2□□□□□ -1.58
MSH6-209ENST00000538136 LTAP01374 205 aa5.19□□□□□ -1.58
MSH6-209ENST00000538136 C12orf74Q32Q52 190 aa5.19□□□□□ -1.58
MSH6-209ENST00000538136 OR5A1Q8NGJ0 315 aa5.19□□□□□ -1.58
MSH6-209ENST00000538136 MRAP2Q96G30 205 aa5.19□□□□□ -1.58
MSH6-209ENST00000538136 SCGB3A1Q96QR1 104 aa5.19□□□□□ -1.58
MSH6-209ENST00000538136 F2Z2F3 143 aa5.19□□□□□ -1.58
MSH6-209ENST00000538136 GAS8-AS1O95177 125 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms