RNA–Protein interactions for RNA: ENST00000538051.5

LMO3-219, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-219ENST00000538051 RAB5AP20339 215 aa8.86□□□□□ -0.99
LMO3-219ENST00000538051 RAB4BP61018 213 aa8.86□□□□□ -0.99
LMO3-219ENST00000538051 CFAP126Q5VTH2 177 aa8.86□□□□□ -0.99
LMO3-219ENST00000538051 TMEM136Q6ZRR5 245 aa8.86□□□□□ -0.99
LMO3-219ENST00000538051 Q6ZTI0 123 aa8.86□□□□□ -0.99
LMO3-219ENST00000538051 OR4C5Q8NGB2 326 aa8.86□□□□□ -0.99
LMO3-219ENST00000538051 WWC2-AS2Q96NR7 200 aa8.86□□□□□ -0.99
LMO3-219ENST00000538051 KIF25-AS1Q9Y6Z4 181 aa8.86□□□□□ -0.99
LMO3-219ENST00000538051 PHOX2AO14813 284 aa8.85□□□□□ -0.99
LMO3-219ENST00000538051 PRM2P04554 102 aa8.85□□□□□ -0.99
LMO3-219ENST00000538051 CRYGDP07320 174 aa8.85□□□□□ -0.99
LMO3-219ENST00000538051 EVI2AP22794 236 aa8.85□□□□□ -0.99
LMO3-219ENST00000538051 DAD1P61803 113 aa8.85□□□□□ -0.99
LMO3-219ENST00000538051 MRPL16Q9NX20 251 aaKnown RBP8.85□□□□□ -0.99
LMO3-219ENST00000538051 TRBV10-1A0A0K0K1A3 114 aa8.84□□□□□ -0.99
LMO3-219ENST00000538051 ATP5G1P05496 136 aa8.84□□□□□ -0.99
LMO3-219ENST00000538051 EMP1P54849 157 aa8.84□□□□□ -0.99
LMO3-219ENST00000538051 UFSP1Q6NVU6 142 aa8.84□□□□□ -0.99
LMO3-219ENST00000538051 C14orf178Q8N769 122 aaPredicted RBP8.84□□□□□ -0.99
LMO3-219ENST00000538051 RETNQ9HD89 108 aa8.84□□□□□ -0.99
LMO3-219ENST00000538051 MSRB1Q9NZV6 116 aa8.84□□□□□ -0.99
LMO3-219ENST00000538051 TRAPPC1Q9Y5R8 145 aa8.84□□□□□ -0.99
LMO3-219ENST00000538051 TENM3Q9P273 2699 aa8.84□□□□□ -0.99
LMO3-219ENST00000538051 TRBV6-4A0A1B0GX49 114 aa8.83□□□□□ -1
LMO3-219ENST00000538051 GAGE12BA1L429 117 aa8.83□□□□□ -1
LMO3-219ENST00000538051 GAGE7O76087 117 aa8.83□□□□□ -1
LMO3-219ENST00000538051 IGHV3-53P01767 116 aa8.83□□□□□ -1
LMO3-219ENST00000538051 APCSP02743 223 aa8.83□□□□□ -1
LMO3-219ENST00000538051 GAGE12FP0CL80 117 aa8.83□□□□□ -1
LMO3-219ENST00000538051 GAGE12GP0CL81 117 aa8.83□□□□□ -1
LMO3-219ENST00000538051 GAGE12IP0CL82 117 aa8.83□□□□□ -1
LMO3-219ENST00000538051 RAB4AP20338 218 aa8.83□□□□□ -1
LMO3-219ENST00000538051 RPS10P46783 165 aaKnown RBP8.83□□□□□ -1
LMO3-219ENST00000538051 ORMDL3Q8N138 153 aa8.83□□□□□ -1
LMO3-219ENST00000538051 NACAE9PAV3 2078 aa8.83□□□□□ -1
LMO3-219ENST00000538051 STAB2Q8WWQ8 2551 aa8.82□□□□□ -1
LMO3-219ENST00000538051 COL7A1Q02388 2944 aa8.82□□□□□ -1
LMO3-219ENST00000538051 MUC21A0A0G2JKD1 596 aa8.82□□□□□ -1
LMO3-219ENST00000538051 A0A0J9YWU9 116 aa8.82□□□□□ -1
LMO3-219ENST00000538051 MUC21A0A140T8X8 626 aa8.82□□□□□ -1
LMO3-219ENST00000538051 LINC00315P59091 139 aa8.82□□□□□ -1
LMO3-219ENST00000538051 C11orf45Q8TAV5 145 aa8.82□□□□□ -1
LMO3-219ENST00000538051 DNAJC30Q96LL9 226 aa8.82□□□□□ -1
LMO3-219ENST00000538051 MRPL18Q9H0U6 180 aaKnown RBP8.82□□□□□ -1
LMO3-219ENST00000538051 U3KQK5 164 aa8.82□□□□□ -1
LMO3-219ENST00000538051 DNAH9Q9NYC9 4486 aa8.82□□□□□ -1
LMO3-219ENST00000538051 H3BNG1 76 aa8.81□□□□□ -1
LMO3-219ENST00000538051 DEFB130BP0DP73 79 aa8.81□□□□□ -1
LMO3-219ENST00000538051 DEFB130AP0DP74 79 aa8.81□□□□□ -1
LMO3-219ENST00000538051 GATA1P15976 413 aaPredicted RBP8.81□□□□□ -1
LMO3-219ENST00000538051 CKS2P33552 79 aa8.81□□□□□ -1
LMO3-219ENST00000538051 RHOHQ15669 191 aa8.81□□□□□ -1
LMO3-219ENST00000538051 ZNF56Q15929 161 aa8.81□□□□□ -1
LMO3-219ENST00000538051 FAM74A4Q5TZK3 123 aa8.81□□□□□ -1
LMO3-219ENST00000538051 AMN1Q8IY45 258 aa8.81□□□□□ -1
LMO3-219ENST00000538051 RNF185Q96GF1 192 aa8.81□□□□□ -1
LMO3-219ENST00000538051 PRO0255Q9UI72 69 aa8.81□□□□□ -1
LMO3-219ENST00000538051 A0A087WWL8 130 aa8.8□□□□□ -1
LMO3-219ENST00000538051 F5H697 171 aa8.8□□□□□ -1
LMO3-219ENST00000538051 SSTP61278 116 aa8.8□□□□□ -1
LMO3-219ENST00000538051 RPL32P62910 135 aaKnown RBP8.8□□□□□ -1
LMO3-219ENST00000538051 FABP9Q0Z7S8 132 aa8.8□□□□□ -1
LMO3-219ENST00000538051 MRPL51Q4U2R6 128 aaKnown RBP8.8□□□□□ -1
LMO3-219ENST00000538051 ZNF479Q96JC4 524 aa8.8□□□□□ -1
LMO3-219ENST00000538051 C20orf78Q9BR46 151 aa8.8□□□□□ -1
LMO3-219ENST00000538051 CELA1Q9UNI1 258 aa8.8□□□□□ -1
LMO3-219ENST00000538051 HUWE1Q7Z6Z7 4374 aaKnown RBP8.8□□□□□ -1
LMO3-219ENST00000538051 TRGV4A0A0C4DH28 118 aa8.79□□□□□ -1
LMO3-219ENST00000538051 TRBV6-5A0A0K0K1A5 114 aa8.79□□□□□ -1
LMO3-219ENST00000538051 M0QY20 66 aa8.79□□□□□ -1
LMO3-219ENST00000538051 DEFB4AO15263 64 aa8.79□□□□□ -1
LMO3-219ENST00000538051 TCAPO15273 167 aa8.79□□□□□ -1
LMO3-219ENST00000538051 MGPP08493 103 aa8.79□□□□□ -1
LMO3-219ENST00000538051 C12orf74Q32Q52 190 aa8.79□□□□□ -1
LMO3-219ENST00000538051 SH2D6Q7Z4S9 175 aa8.79□□□□□ -1
LMO3-219ENST00000538051 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.79□□□□□ -1
LMO3-219ENST00000538051 PRADC1Q9BSG0 188 aa8.79□□□□□ -1
LMO3-219ENST00000538051 SAMD10Q9BYL1 202 aa8.79□□□□□ -1
LMO3-219ENST00000538051 JPT2Q9H910 190 aa8.79□□□□□ -1
LMO3-219ENST00000538051 TRAV10A0A0B4J240 114 aa8.78□□□□□ -1
LMO3-219ENST00000538051 PRSS47A8MTI9 375 aa8.78□□□□□ -1
LMO3-219ENST00000538051 C1orf196B1AJZ1 125 aa8.78□□□□□ -1
LMO3-219ENST00000538051 K7EMI3 77 aa8.78□□□□□ -1
LMO3-219ENST00000538051 K7EQD1 137 aa8.78□□□□□ -1
LMO3-219ENST00000538051 FHL2Q14192 279 aa8.78□□□□□ -1
LMO3-219ENST00000538051 SUMO4Q6EEV6 95 aa8.78□□□□□ -1
LMO3-219ENST00000538051 NIT2Q9NQR4 276 aa8.78□□□□□ -1
LMO3-219ENST00000538051 HHLA3Q9XRX5 114 aa8.78□□□□□ -1
LMO3-219ENST00000538051 KMT2CQ8NEZ4 4911 aaKnown RBP8.78□□□□□ -1
LMO3-219ENST00000538051 D6R8Y8 96 aa8.77□□□□□ -1.01
LMO3-219ENST00000538051 TRGC2P03986 189 aa8.77□□□□□ -1.01
LMO3-219ENST00000538051 OR10J3Q5JRS4 329 aa8.77□□□□□ -1.01
LMO3-219ENST00000538051 PRELID3AQ96N28 172 aa8.77□□□□□ -1.01
LMO3-219ENST00000538051 CRYBA4P53673 196 aa8.76□□□□□ -1.01
LMO3-219ENST00000538051 RAB5BP61020 215 aa8.76□□□□□ -1.01
LMO3-219ENST00000538051 RPL36AP83881 106 aaKnown RBP8.76□□□□□ -1.01
LMO3-219ENST00000538051 TMEM97Q5BJF2 176 aa8.76□□□□□ -1.01
LMO3-219ENST00000538051 RPL36ALQ969Q0 106 aaKnown RBP8.76□□□□□ -1.01
LMO3-219ENST00000538051 ALKBH7Q9BT30 221 aaPredicted RBP8.76□□□□□ -1.01
LMO3-219ENST00000538051 TRBV7-3A0A075B6L6 115 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms