RNA–Protein interactions for RNA: ENST00000536688.5

RFX4-204, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 2,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-204ENST00000536688 ARFGEF3Q5TH69 2177 aa7.66□□□□□ -1.18
RFX4-204ENST00000536688 TRAV41A0A0B4J266 112 aa7.66□□□□□ -1.18
RFX4-204ENST00000536688 EPM2AB3EWF7 344 aa7.66□□□□□ -1.18
RFX4-204ENST00000536688 J3QLI3 93 aa7.66□□□□□ -1.18
RFX4-204ENST00000536688 SPRY3O43610 288 aa7.66□□□□□ -1.18
RFX4-204ENST00000536688 NDUFC2O95298 119 aa7.66□□□□□ -1.18
RFX4-204ENST00000536688 APELAP0DMC3 54 aa7.66□□□□□ -1.18
RFX4-204ENST00000536688 CCL3L1P16619 93 aa7.66□□□□□ -1.18
RFX4-204ENST00000536688 PSMB8P28062 276 aa7.66□□□□□ -1.18
RFX4-204ENST00000536688 NBL1P41271 181 aa7.66□□□□□ -1.18
RFX4-204ENST00000536688 GPHB5Q86YW7 130 aa7.66□□□□□ -1.18
RFX4-204ENST00000536688 RPL39LQ96EH5 51 aaKnown RBP7.66□□□□□ -1.18
RFX4-204ENST00000536688 TRGV5A0A0B4J1U4 118 aa7.66□□□□□ -1.18
RFX4-204ENST00000536688 C9orf47Q6ZRZ4 202 aa7.66□□□□□ -1.18
RFX4-204ENST00000536688 TMEM61Q8N0U2 210 aa7.66□□□□□ -1.18
RFX4-204ENST00000536688 DEFB108BQ8NET1 73 aa7.66□□□□□ -1.18
RFX4-204ENST00000536688 CLEC2BQ92478 149 aa7.66□□□□□ -1.18
RFX4-204ENST00000536688 ZFHX2Q9C0A1 2572 aaPredicted RBP7.65□□□□□ -1.18
RFX4-204ENST00000536688 PATE3B3GLJ2 98 aa7.65□□□□□ -1.18
RFX4-204ENST00000536688 VCYO14598 125 aa7.65□□□□□ -1.18
RFX4-204ENST00000536688 TIMM17BO60830 172 aa7.65□□□□□ -1.18
RFX4-204ENST00000536688 POLR2KP53803 58 aaKnown RBP7.65□□□□□ -1.18
RFX4-204ENST00000536688 MIAQ16674 131 aa7.65□□□□□ -1.18
RFX4-204ENST00000536688 PMS2CLQ68D20 193 aa7.65□□□□□ -1.18
RFX4-204ENST00000536688 PRORYQ9H606 182 aa7.65□□□□□ -1.18
RFX4-204ENST00000536688 CCL4P13236 92 aa7.64□□□□□ -1.19
RFX4-204ENST00000536688 SAP25Q8TEE9 199 aa7.64□□□□□ -1.19
RFX4-204ENST00000536688 DSCR8Q96T75 97 aa7.64□□□□□ -1.19
RFX4-204ENST00000536688 PIMREGQ9BSJ6 248 aa7.64□□□□□ -1.19
RFX4-204ENST00000536688 SPRR3Q9UBC9 169 aa7.64□□□□□ -1.19
RFX4-204ENST00000536688 FAM186AA6NE01 2351 aa7.64□□□□□ -1.19
RFX4-204ENST00000536688 ANKRD11Q6UB99 2663 aaPredicted RBP7.64□□□□□ -1.19
RFX4-204ENST00000536688 TRAV8-3A0A0A6YYJ7 113 aa7.64□□□□□ -1.19
RFX4-204ENST00000536688 TINCRA0A1B0GVN0 87 aa7.64□□□□□ -1.19
RFX4-204ENST00000536688 LY6LH3BQJ8 138 aa7.64□□□□□ -1.19
RFX4-204ENST00000536688 RHOHQ15669 191 aa7.64□□□□□ -1.19
RFX4-204ENST00000536688 EEF1AKMT3Q96AZ1 226 aa7.64□□□□□ -1.19
RFX4-204ENST00000536688 CYSTM1Q9H1C7 97 aa7.64□□□□□ -1.19
RFX4-204ENST00000536688 FASNP49327 2511 aaKnown RBP7.64□□□□□ -1.19
RFX4-204ENST00000536688 PRAC2D3DTV9 90 aa7.63□□□□□ -1.19
RFX4-204ENST00000536688 BUB3O43684 328 aa7.63□□□□□ -1.19
RFX4-204ENST00000536688 Q6JHZ5 121 aa7.63□□□□□ -1.19
RFX4-204ENST00000536688 MDS2Q8NDY4 140 aa7.63□□□□□ -1.19
RFX4-204ENST00000536688 SLC25A15Q9Y619 301 aa7.63□□□□□ -1.19
RFX4-204ENST00000536688 ABCA1O95477 2261 aa7.63□□□□□ -1.19
RFX4-204ENST00000536688 FAM208BQ5VWN6 2430 aa7.63□□□□□ -1.19
RFX4-204ENST00000536688 MAST4O15021 2626 aa7.63□□□□□ -1.19
RFX4-204ENST00000536688 IGLV11-55A0A075B6I3 123 aa7.63□□□□□ -1.19
RFX4-204ENST00000536688 F8W735 103 aaPredicted RBP7.63□□□□□ -1.19
RFX4-204ENST00000536688 NXPH4O95158 308 aa7.63□□□□□ -1.19
RFX4-204ENST00000536688 IGHV1-46P01743 117 aa7.63□□□□□ -1.19
RFX4-204ENST00000536688 CACNA1EQ15878 2313 aa7.62□□□□□ -1.19
RFX4-204ENST00000536688 ZGRF1Q86YA3 2104 aa7.62□□□□□ -1.19
RFX4-204ENST00000536688 IGHV1-3A0A0C4DH29 117 aa7.62□□□□□ -1.19
RFX4-204ENST00000536688 TRBV27A0A0K0K1C4 114 aa7.62□□□□□ -1.19
RFX4-204ENST00000536688 COX7A2LO14548 114 aa7.62□□□□□ -1.19
RFX4-204ENST00000536688 IGHV1-8P0DP01 117 aa7.62□□□□□ -1.19
RFX4-204ENST00000536688 PFN2P35080 140 aa7.62□□□□□ -1.19
RFX4-204ENST00000536688 ZNF415Q09FC8 603 aa7.62□□□□□ -1.19
RFX4-204ENST00000536688 PRIMA1Q86XR5 153 aa7.62□□□□□ -1.19
RFX4-204ENST00000536688 RIF1Q5UIP0 2472 aaKnown RBP7.62□□□□□ -1.19
RFX4-204ENST00000536688 EP300Q09472 2414 aaPredicted RBP7.62□□□□□ -1.19
RFX4-204ENST00000536688 IGHV3-72A0A0B4J1Y9 119 aa7.61□□□□□ -1.19
RFX4-204ENST00000536688 TRBV6-5A0A0K0K1A5 114 aa7.61□□□□□ -1.19
RFX4-204ENST00000536688 PTPRZ1P23471 2315 aaPredicted RBP7.61□□□□□ -1.19
RFX4-204ENST00000536688 OTOGLQ3ZCN5 2332 aa7.61□□□□□ -1.19
RFX4-204ENST00000536688 SPRY2O43597 315 aa7.61□□□□□ -1.19
RFX4-204ENST00000536688 DAZ2Q13117 558 aaKnown RBP7.61□□□□□ -1.19
RFX4-204ENST00000536688 NSUN5P1Q3KNT7 163 aa7.61□□□□□ -1.19
RFX4-204ENST00000536688 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.61□□□□□ -1.19
RFX4-204ENST00000536688 DAZ4Q86SG3 579 aaKnown RBP7.61□□□□□ -1.19
RFX4-204ENST00000536688 LINC00477Q96M19 166 aa7.61□□□□□ -1.19
RFX4-204ENST00000536688 C9orf85Q96MD7 179 aa7.61□□□□□ -1.19
RFX4-204ENST00000536688 DEFB127Q9H1M4 99 aa7.61□□□□□ -1.19
RFX4-204ENST00000536688 DAZ1Q9NQZ3 744 aaKnown RBP7.61□□□□□ -1.19
RFX4-204ENST00000536688 DAZ3Q9NR90 486 aaKnown RBP7.61□□□□□ -1.19
RFX4-204ENST00000536688 FRYLO94915 3013 aa7.61□□□□□ -1.19
RFX4-204ENST00000536688 WDR87Q6ZQQ6 2873 aa7.6□□□□□ -1.19
RFX4-204ENST00000536688 TRAV12-2A0A075B6T6 113 aa7.6□□□□□ -1.19
RFX4-204ENST00000536688 NDUFB3O43676 98 aa7.6□□□□□ -1.19
RFX4-204ENST00000536688 IGLV1-47P01700 117 aa7.6□□□□□ -1.19
RFX4-204ENST00000536688 PRSS2P07478 247 aa7.6□□□□□ -1.19
RFX4-204ENST00000536688 SYNJ2BPP57105 145 aa7.6□□□□□ -1.19
RFX4-204ENST00000536688 NPC2P61916 151 aa7.6□□□□□ -1.19
RFX4-204ENST00000536688 IGFL4Q6B9Z1 124 aa7.6□□□□□ -1.19
RFX4-204ENST00000536688 RNF182Q8N6D2 247 aa7.6□□□□□ -1.19
RFX4-204ENST00000536688 FANCD2OSQ96PS1 177 aa7.6□□□□□ -1.19
RFX4-204ENST00000536688 PHLDA3Q9Y5J5 127 aa7.6□□□□□ -1.19
RFX4-204ENST00000536688 IGHV3OR16-10A0A075B7F0 116 aa7.6□□□□□ -1.19
RFX4-204ENST00000536688 MGPP08493 103 aa7.6□□□□□ -1.19
RFX4-204ENST00000536688 TIRAPP58753 221 aa7.6□□□□□ -1.19
RFX4-204ENST00000536688 BEAN1Q3B7T3 259 aa7.6□□□□□ -1.19
RFX4-204ENST00000536688 SERP1Q9Y6X1 66 aa7.6□□□□□ -1.19
RFX4-204ENST00000536688 TRAV21A0A0B4J279 112 aa7.59□□□□□ -1.19
RFX4-204ENST00000536688 RS1O15537 224 aa7.59□□□□□ -1.19
RFX4-204ENST00000536688 IGHV3-30-3P0DP02 117 aa7.59□□□□□ -1.19
RFX4-204ENST00000536688 RPL39P62891 51 aaKnown RBP7.59□□□□□ -1.19
RFX4-204ENST00000536688 RNF152Q8N8N0 203 aa7.59□□□□□ -1.19
RFX4-204ENST00000536688 CNEP1R1Q8N9A8 125 aa7.59□□□□□ -1.19
RFX4-204ENST00000536688 KIF25-AS1Q9Y6Z4 181 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms