RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 VPS13BQ7Z7G8 4022 aa8.77□□□□□ -1.01
RTN3-207ENST00000536011 KRBOX1C9JBD0 128 aa8.77□□□□□ -1.01
RTN3-207ENST00000536011 M0R036 132 aa8.77□□□□□ -1.01
RTN3-207ENST00000536011 ARPC5O15511 151 aa8.77□□□□□ -1.01
RTN3-207ENST00000536011 SH2D1AO60880 128 aa8.77□□□□□ -1.01
RTN3-207ENST00000536011 LINC00694P0DN24 101 aa8.77□□□□□ -1.01
RTN3-207ENST00000536011 TPT1P13693 172 aaKnown RBP8.77□□□□□ -1.01
RTN3-207ENST00000536011 RGS21Q2M5E4 152 aa8.77□□□□□ -1.01
RTN3-207ENST00000536011 RMI2Q96E14 147 aa8.77□□□□□ -1.01
RTN3-207ENST00000536011 FAT1Q14517 4588 aa8.77□□□□□ -1.01
RTN3-207ENST00000536011 TRBV6-1A0A0K0K1D8 114 aa8.76□□□□□ -1.01
RTN3-207ENST00000536011 ARMS2P0C7Q2 107 aa8.76□□□□□ -1.01
RTN3-207ENST00000536011 FAM74A4Q5TZK3 123 aa8.76□□□□□ -1.01
RTN3-207ENST00000536011 CST9LP1Q5W188 147 aa8.76□□□□□ -1.01
RTN3-207ENST00000536011 Q6ZSN1 163 aa8.76□□□□□ -1.01
RTN3-207ENST00000536011 ZFP82Q8N141 532 aa8.76□□□□□ -1.01
RTN3-207ENST00000536011 DMBT1Q9UGM3 2413 aaPredicted RBP8.75□□□□□ -1.01
RTN3-207ENST00000536011 LTAP01374 205 aa8.75□□□□□ -1.01
RTN3-207ENST00000536011 C1QBP02746 253 aa8.75□□□□□ -1.01
RTN3-207ENST00000536011 S100A9P06702 114 aaKnown RBP8.75□□□□□ -1.01
RTN3-207ENST00000536011 AKR1C3P42330 323 aa8.75□□□□□ -1.01
RTN3-207ENST00000536011 UFSP1Q6NVU6 142 aa8.75□□□□□ -1.01
RTN3-207ENST00000536011 KCNIP4Q6PIL6 250 aa8.75□□□□□ -1.01
RTN3-207ENST00000536011 TRBV10-1A0A0K0K1A3 114 aa8.74□□□□□ -1.01
RTN3-207ENST00000536011 GRIFINA4D1Z8 144 aa8.74□□□□□ -1.01
RTN3-207ENST00000536011 UMAD1C9J7I0 102 aa8.74□□□□□ -1.01
RTN3-207ENST00000536011 M0R381 172 aa8.74□□□□□ -1.01
RTN3-207ENST00000536011 CRIP1P50238 77 aa8.74□□□□□ -1.01
RTN3-207ENST00000536011 ZNF674Q2M3X9 581 aa8.74□□□□□ -1.01
RTN3-207ENST00000536011 C14orf178Q8N769 122 aaPredicted RBP8.74□□□□□ -1.01
RTN3-207ENST00000536011 SFRP2Q96HF1 295 aa8.74□□□□□ -1.01
RTN3-207ENST00000536011 SAMD10Q9BYL1 202 aa8.74□□□□□ -1.01
RTN3-207ENST00000536011 JPT2Q9H910 190 aa8.74□□□□□ -1.01
RTN3-207ENST00000536011 SRRM2Q9UQ35 2752 aaKnown RBP8.74□□□□□ -1.01
RTN3-207ENST00000536011 HERC1Q15751 4861 aa8.74□□□□□ -1.01
RTN3-207ENST00000536011 A0A087WX48 190 aa8.73□□□□□ -1.01
RTN3-207ENST00000536011 G3V3Q6 166 aa8.73□□□□□ -1.01
RTN3-207ENST00000536011 PFDN1O60925 122 aa8.73□□□□□ -1.01
RTN3-207ENST00000536011 RPL36AP83881 106 aaKnown RBP8.73□□□□□ -1.01
RTN3-207ENST00000536011 ZNF345Q14585 488 aa8.73□□□□□ -1.01
RTN3-207ENST00000536011 ELOBQ15370 118 aa8.73□□□□□ -1.01
RTN3-207ENST00000536011 DAZ4Q86SG3 579 aaKnown RBP8.73□□□□□ -1.01
RTN3-207ENST00000536011 RPL36ALQ969Q0 106 aaKnown RBP8.73□□□□□ -1.01
RTN3-207ENST00000536011 CHCHD7Q9BUK0 85 aa8.73□□□□□ -1.01
RTN3-207ENST00000536011 DAZ3Q9NR90 486 aaKnown RBP8.73□□□□□ -1.01
RTN3-207ENST00000536011 CYTL1Q9NRR1 136 aa8.73□□□□□ -1.01
RTN3-207ENST00000536011 A0A087WWL8 130 aa8.72□□□□□ -1.01
RTN3-207ENST00000536011 TMSB15BA0A087X1C1 80 aa8.72□□□□□ -1.01
RTN3-207ENST00000536011 TMEM238LA0A1B0GVL6 79 aa8.72□□□□□ -1.01
RTN3-207ENST00000536011 SMR3BP02814 79 aaPredicted RBP8.72□□□□□ -1.01
RTN3-207ENST00000536011 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.72□□□□□ -1.01
RTN3-207ENST00000536011 MYCBP2O75592 4640 aa8.71□□□□□ -1.01
RTN3-207ENST00000536011 PAGE4O60829 102 aa8.71□□□□□ -1.02
RTN3-207ENST00000536011 EIF5AP63241 154 aaKnown RBP8.71□□□□□ -1.02
RTN3-207ENST00000536011 NIT1Q86X76 327 aa8.71□□□□□ -1.02
RTN3-207ENST00000536011 Q8N3U1 123 aa8.71□□□□□ -1.02
RTN3-207ENST00000536011 KCNRGQ8N5I3 272 aa8.71□□□□□ -1.02
RTN3-207ENST00000536011 FAM213BQ8TBF2 198 aa8.71□□□□□ -1.02
RTN3-207ENST00000536011 SFT2D1Q8WV19 159 aa8.71□□□□□ -1.02
RTN3-207ENST00000536011 TRBV7-3A0A075B6L6 115 aa8.7□□□□□ -1.02
RTN3-207ENST00000536011 CXCL1P09341 107 aa8.7□□□□□ -1.02
RTN3-207ENST00000536011 Q9UF83 564 aa8.7□□□□□ -1.02
RTN3-207ENST00000536011 IGKV2D-24A0A075B6R9 120 aa8.69□□□□□ -1.02
RTN3-207ENST00000536011 A0A0D9SG52 128 aa8.69□□□□□ -1.02
RTN3-207ENST00000536011 KANTRA0A1W2PQU2 76 aa8.69□□□□□ -1.02
RTN3-207ENST00000536011 LECT2O14960 151 aa8.69□□□□□ -1.02
RTN3-207ENST00000536011 RAB4BP61018 213 aa8.69□□□□□ -1.02
RTN3-207ENST00000536011 PKIAP61925 76 aa8.69□□□□□ -1.02
RTN3-207ENST00000536011 HAMPP81172 84 aa8.69□□□□□ -1.02
RTN3-207ENST00000536011 Q0VG73 95 aa8.69□□□□□ -1.02
RTN3-207ENST00000536011 Q8N976 141 aa8.69□□□□□ -1.02
RTN3-207ENST00000536011 MBD3L1Q8WWY6 194 aa8.69□□□□□ -1.02
RTN3-207ENST00000536011 ZNF471Q9BX82 626 aaPredicted RBP8.69□□□□□ -1.02
RTN3-207ENST00000536011 HMSDA8MTL9 139 aa8.68□□□□□ -1.02
RTN3-207ENST00000536011 UBE2D3P61077 147 aa8.68□□□□□ -1.02
RTN3-207ENST00000536011 UBE2D2P62837 147 aa8.68□□□□□ -1.02
RTN3-207ENST00000536011 ZNF56Q15929 161 aa8.68□□□□□ -1.02
RTN3-207ENST00000536011 XP32Q5T750 250 aa8.68□□□□□ -1.02
RTN3-207ENST00000536011 BAGE2Q86Y30 109 aa8.68□□□□□ -1.02
RTN3-207ENST00000536011 OR10G8Q8NGN5 311 aa8.68□□□□□ -1.02
RTN3-207ENST00000536011 KLK12Q9UKR0 248 aa8.68□□□□□ -1.02
RTN3-207ENST00000536011 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.67□□□□□ -1.02
RTN3-207ENST00000536011 SCO2A0A1W2PP80 73 aa8.67□□□□□ -1.02
RTN3-207ENST00000536011 RBFOX3A6NFN3 312 aa8.67□□□□□ -1.02
RTN3-207ENST00000536011 SMLR1H3BR10 107 aa8.67□□□□□ -1.02
RTN3-207ENST00000536011 BCL2L11O43521 198 aa8.67□□□□□ -1.02
RTN3-207ENST00000536011 PLA2G1BP04054 148 aaKnown RBP8.67□□□□□ -1.02
RTN3-207ENST00000536011 WFDC2Q14508 124 aa8.67□□□□□ -1.02
RTN3-207ENST00000536011 SPANXN1Q5VSR9 72 aa8.67□□□□□ -1.02
RTN3-207ENST00000536011 Q6ZSA8 131 aa8.67□□□□□ -1.02
RTN3-207ENST00000536011 BAALCQ8WXS3 180 aa8.67□□□□□ -1.02
RTN3-207ENST00000536011 UBE2WQ96B02 151 aa8.67□□□□□ -1.02
RTN3-207ENST00000536011 DNAH8Q96JB1 4490 aa8.67□□□□□ -1.02
RTN3-207ENST00000536011 TRBV6-8A0A0A6YYG3 113 aa8.66□□□□□ -1.02
RTN3-207ENST00000536011 A0A1B0GV50 99 aa8.66□□□□□ -1.02
RTN3-207ENST00000536011 TMEM262E9PQX1 116 aa8.66□□□□□ -1.02
RTN3-207ENST00000536011 CRPP02741 224 aa8.66□□□□□ -1.02
RTN3-207ENST00000536011 H2AFB1P0C5Y9 115 aa8.66□□□□□ -1.02
RTN3-207ENST00000536011 OR5AL1P0C617 328 aa8.66□□□□□ -1.02
RTN3-207ENST00000536011 SMIM17P0DL12 118 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms