RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 GAGE2BQ13066 116 aa6.15□□□□□ -1.42
CSDE1-215ENST00000533818 PHF5AQ7RTV0 110 aaKnown RBP6.15□□□□□ -1.42
CSDE1-215ENST00000533818 OR10G8Q8NGN5 311 aa6.15□□□□□ -1.42
CSDE1-215ENST00000533818 SCP2D1Q9UJQ7 156 aa6.15□□□□□ -1.42
CSDE1-215ENST00000533818 ZNF80P51504 273 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-215ENST00000533818 LSM3P62310 102 aaKnown RBP6.14□□□□□ -1.43
CSDE1-215ENST00000533818 ZNF674Q2M3X9 581 aa6.14□□□□□ -1.43
CSDE1-215ENST00000533818 TMEM128Q5BJH2 165 aa6.14□□□□□ -1.43
CSDE1-215ENST00000533818 C9orf116Q5BN46 136 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-215ENST00000533818 GCSAMLQ5JQS6 135 aa6.14□□□□□ -1.43
CSDE1-215ENST00000533818 MIR17HGQ75NE6 70 aa6.14□□□□□ -1.43
CSDE1-215ENST00000533818 C20orf203Q8NBC4 194 aa6.14□□□□□ -1.43
CSDE1-215ENST00000533818 C15orf40Q8WUR7 153 aa6.14□□□□□ -1.43
CSDE1-215ENST00000533818 MITD1Q8WV92 249 aa6.14□□□□□ -1.43
CSDE1-215ENST00000533818 RPP21Q9H633 154 aaKnown RBP6.14□□□□□ -1.43
CSDE1-215ENST00000533818 PHLDA3Q9Y5J5 127 aa6.14□□□□□ -1.43
CSDE1-215ENST00000533818 SSPOA2VEC9 5147 aa6.14□□□□□ -1.43
CSDE1-215ENST00000533818 A6NJY4 79 aa6.13□□□□□ -1.43
CSDE1-215ENST00000533818 TMEM97Q5BJF2 176 aa6.13□□□□□ -1.43
CSDE1-215ENST00000533818 GOLT1AQ6ZVE7 132 aa6.13□□□□□ -1.43
CSDE1-215ENST00000533818 CARD19Q96LW7 228 aa6.13□□□□□ -1.43
CSDE1-215ENST00000533818 PPDPFQ9H3Y8 114 aa6.13□□□□□ -1.43
CSDE1-215ENST00000533818 EXTL2Q9UBQ6 330 aa6.13□□□□□ -1.43
CSDE1-215ENST00000533818 WDR83OSQ9Y284 106 aa6.13□□□□□ -1.43
CSDE1-215ENST00000533818 TRBV25-1A0A075B6N4 114 aa6.12□□□□□ -1.43
CSDE1-215ENST00000533818 SULT1A2P50226 295 aa6.12□□□□□ -1.43
CSDE1-215ENST00000533818 TAS2R30P59541 319 aa6.12□□□□□ -1.43
CSDE1-215ENST00000533818 LINC00173Q6ZV60 143 aa6.12□□□□□ -1.43
CSDE1-215ENST00000533818 NEXN-AS1Q8NBZ9 246 aa6.12□□□□□ -1.43
CSDE1-215ENST00000533818 CMTM2Q8TAZ6 248 aa6.12□□□□□ -1.43
CSDE1-215ENST00000533818 DERL1Q9BUN8 251 aa6.12□□□□□ -1.43
CSDE1-215ENST00000533818 OR5AC2Q9NZP5 309 aa6.12□□□□□ -1.43
CSDE1-215ENST00000533818 SYNE2Q8WXH0 6885 aaKnown RBP6.11□□□□□ -1.43
CSDE1-215ENST00000533818 IGLV4-60A0A075B6I1 120 aa6.11□□□□□ -1.43
CSDE1-215ENST00000533818 GCGP01275 180 aa6.11□□□□□ -1.43
CSDE1-215ENST00000533818 SEC61BP60468 96 aaKnown RBP6.11□□□□□ -1.43
CSDE1-215ENST00000533818 BAXQ07812 192 aa6.11□□□□□ -1.43
CSDE1-215ENST00000533818 LINC00337Q8N6G1 96 aa6.11□□□□□ -1.43
CSDE1-215ENST00000533818 TYMSOSQ8TAI1 123 aa6.11□□□□□ -1.43
CSDE1-215ENST00000533818 LINC00526Q96FQ7 95 aa6.11□□□□□ -1.43
CSDE1-215ENST00000533818 SFRP2Q96HF1 295 aa6.11□□□□□ -1.43
CSDE1-215ENST00000533818 NDFIP1Q9BT67 221 aa6.11□□□□□ -1.43
CSDE1-215ENST00000533818 NAA50Q9GZZ1 169 aaKnown RBP6.11□□□□□ -1.43
CSDE1-215ENST00000533818 LYRM2Q9NU23 88 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-215ENST00000533818 UQCC1Q9NVA1 299 aa6.11□□□□□ -1.43
CSDE1-215ENST00000533818 MCUBQ9NWR8 336 aa6.11□□□□□ -1.43
CSDE1-215ENST00000533818 USH2AO75445 5202 aa6.1□□□□□ -1.43
CSDE1-215ENST00000533818 LOC107984640A0A0U1RRK4 108 aa6.1□□□□□ -1.43
CSDE1-215ENST00000533818 OR7C2O60412 319 aa6.1□□□□□ -1.43
CSDE1-215ENST00000533818 SCGB1D2O95969 90 aa6.1□□□□□ -1.43
CSDE1-215ENST00000533818 MBPP02686 304 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-215ENST00000533818 SGK494Q96LW2 274 aa6.1□□□□□ -1.43
CSDE1-215ENST00000533818 IL36BQ9NZH7 164 aa6.1□□□□□ -1.43
CSDE1-215ENST00000533818 TRBV6-1A0A0K0K1D8 114 aa6.09□□□□□ -1.43
CSDE1-215ENST00000533818 UBE2L5PA0A1B0GUS4 154 aa6.09□□□□□ -1.43
CSDE1-215ENST00000533818 A0A1B0GUV1 79 aa6.09□□□□□ -1.43
CSDE1-215ENST00000533818 SFT2D2O95562 160 aa6.09□□□□□ -1.43
CSDE1-215ENST00000533818 MRPS10P82664 201 aaKnown RBP6.09□□□□□ -1.43
CSDE1-215ENST00000533818 NEDD8Q15843 81 aa6.09□□□□□ -1.43
CSDE1-215ENST00000533818 CTF1Q16619 201 aa6.09□□□□□ -1.43
CSDE1-215ENST00000533818 IQCJQ1A5X6 159 aa6.09□□□□□ -1.43
CSDE1-215ENST00000533818 KRTAP19-2Q3LHN2 52 aa6.09□□□□□ -1.43
CSDE1-215ENST00000533818 SPANXN2Q5MJ10 180 aa6.09□□□□□ -1.43
CSDE1-215ENST00000533818 MZT2AQ6P582 158 aa6.09□□□□□ -1.43
CSDE1-215ENST00000533818 KRTAP11-1Q8IUC1 163 aa6.09□□□□□ -1.43
CSDE1-215ENST00000533818 OR11H4Q8NGC9 324 aa6.09□□□□□ -1.43
CSDE1-215ENST00000533818 AQP10Q96PS8 301 aa6.09□□□□□ -1.43
CSDE1-215ENST00000533818 IGKV3D-20A0A0C4DH25 116 aa6.08□□□□□ -1.44
CSDE1-215ENST00000533818 IGHV1-24A0A0C4DH33 117 aa6.08□□□□□ -1.44
CSDE1-215ENST00000533818 C7orf66A4D0T2 115 aa6.08□□□□□ -1.44
CSDE1-215ENST00000533818 H3BVH4 76 aa6.08□□□□□ -1.44
CSDE1-215ENST00000533818 CST7O76096 145 aa6.08□□□□□ -1.44
CSDE1-215ENST00000533818 UBE2L3P68036 154 aaKnown RBP6.08□□□□□ -1.44
CSDE1-215ENST00000533818 SYCNQ0VAF6 134 aa6.08□□□□□ -1.44
CSDE1-215ENST00000533818 SMIM4Q8WVI0 70 aa6.08□□□□□ -1.44
CSDE1-215ENST00000533818 OTORQ9NRC9 128 aa6.08□□□□□ -1.44
CSDE1-215ENST00000533818 A0A087X002 238 aa6.07□□□□□ -1.44
CSDE1-215ENST00000533818 IGKV3OR2-268A0A0C4DH90 116 aa6.07□□□□□ -1.44
CSDE1-215ENST00000533818 M0R2T5 61 aa6.07□□□□□ -1.44
CSDE1-215ENST00000533818 ARMS2P0C7Q2 107 aa6.07□□□□□ -1.44
CSDE1-215ENST00000533818 FGF6P10767 208 aa6.07□□□□□ -1.44
CSDE1-215ENST00000533818 FGF7P21781 194 aa6.07□□□□□ -1.44
CSDE1-215ENST00000533818 RAB4BP61018 213 aa6.07□□□□□ -1.44
CSDE1-215ENST00000533818 PPP1R1AQ13522 171 aa6.07□□□□□ -1.44
CSDE1-215ENST00000533818 ZFP69Q49AA0 526 aa6.07□□□□□ -1.44
CSDE1-215ENST00000533818 FAM74A1Q5RGS3 127 aa6.07□□□□□ -1.44
CSDE1-215ENST00000533818 EIF5AL1Q6IS14 154 aaKnown RBP6.07□□□□□ -1.44
CSDE1-215ENST00000533818 ANKRD20A5PA0PJZ0 165 aa6.06□□□□□ -1.44
CSDE1-215ENST00000533818 M0R381 172 aa6.06□□□□□ -1.44
CSDE1-215ENST00000533818 SMUG1Q53HV7 270 aa6.06□□□□□ -1.44
CSDE1-215ENST00000533818 TSKUQ8WUA8 353 aa6.06□□□□□ -1.44
CSDE1-215ENST00000533818 CHCHD10Q8WYQ3 142 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-215ENST00000533818 SSBP4Q9BWG4 385 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-215ENST00000533818 L7N2F9 121 aa6.05□□□□□ -1.44
CSDE1-215ENST00000533818 BCL2P10415 239 aa6.05□□□□□ -1.44
CSDE1-215ENST00000533818 BCAP31P51572 246 aa6.05□□□□□ -1.44
CSDE1-215ENST00000533818 VAMP2P63027 116 aa6.05□□□□□ -1.44
CSDE1-215ENST00000533818 GNG5P63218 68 aa6.05□□□□□ -1.44
CSDE1-215ENST00000533818 SDHCQ99643 169 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-215ENST00000533818 GSKIPQ9P0R6 139 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms