RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 EVI2AP22794 236 aa10.02□□□□□ -0.81
HIF3A-215ENST00000533145 LINC00315P59091 139 aa10.02□□□□□ -0.81
HIF3A-215ENST00000533145 CFAP126Q5VTH2 177 aa10.02□□□□□ -0.81
HIF3A-215ENST00000533145 UFSP1Q6NVU6 142 aa10.02□□□□□ -0.81
HIF3A-215ENST00000533145 ZFP2Q6ZN57 461 aa10.02□□□□□ -0.81
HIF3A-215ENST00000533145 FRZBQ92765 325 aa10.02□□□□□ -0.81
HIF3A-215ENST00000533145 DPH3P1Q9H4G8 78 aa10.02□□□□□ -0.81
HIF3A-215ENST00000533145 A0A0J9YWU9 116 aa10.01□□□□□ -0.81
HIF3A-215ENST00000533145 GAGE12BA1L429 117 aa10.01□□□□□ -0.81
HIF3A-215ENST00000533145 GAGE7O76087 117 aa10.01□□□□□ -0.81
HIF3A-215ENST00000533145 GAGE12FP0CL80 117 aa10.01□□□□□ -0.81
HIF3A-215ENST00000533145 GAGE12GP0CL81 117 aa10.01□□□□□ -0.81
HIF3A-215ENST00000533145 GAGE12IP0CL82 117 aa10.01□□□□□ -0.81
HIF3A-215ENST00000533145 FAM104BQ5XKR9 115 aa10.01□□□□□ -0.81
HIF3A-215ENST00000533145 C14orf178Q8N769 122 aaPredicted RBP10.01□□□□□ -0.81
HIF3A-215ENST00000533145 CELA1Q9UNI1 258 aa10.01□□□□□ -0.81
HIF3A-215ENST00000533145 DNAH9Q9NYC9 4486 aa10.01□□□□□ -0.81
HIF3A-215ENST00000533145 RHODO00212 210 aa10□□□□□ -0.81
HIF3A-215ENST00000533145 SMIM17P0DL12 118 aa10□□□□□ -0.81
HIF3A-215ENST00000533145 RAB5AP20339 215 aa10□□□□□ -0.81
HIF3A-215ENST00000533145 OR4C5Q8NGB2 326 aa10□□□□□ -0.81
HIF3A-215ENST00000533145 RNF185Q96GF1 192 aa10□□□□□ -0.81
HIF3A-215ENST00000533145 SAMD10Q9BYL1 202 aa10□□□□□ -0.81
HIF3A-215ENST00000533145 HUWE1Q7Z6Z7 4374 aaKnown RBP9.99□□□□□ -0.81
HIF3A-215ENST00000533145 TRGV2A0A075B6R0 118 aa9.99□□□□□ -0.81
HIF3A-215ENST00000533145 DEFB130BP0DP73 79 aa9.99□□□□□ -0.81
HIF3A-215ENST00000533145 DEFB130AP0DP74 79 aa9.99□□□□□ -0.81
HIF3A-215ENST00000533145 RAB4AP20338 218 aa9.99□□□□□ -0.81
HIF3A-215ENST00000533145 DAD1P61803 113 aa9.99□□□□□ -0.81
HIF3A-215ENST00000533145 EDA2RQ9HAV5 297 aa9.99□□□□□ -0.81
HIF3A-215ENST00000533145 A0A087WWL8 130 aa9.98□□□□□ -0.81
HIF3A-215ENST00000533145 RAB4BP61018 213 aa9.98□□□□□ -0.81
HIF3A-215ENST00000533145 C12orf74Q32Q52 190 aa9.98□□□□□ -0.81
HIF3A-215ENST00000533145 AMN1Q8IY45 258 aa9.98□□□□□ -0.81
HIF3A-215ENST00000533145 ZNF479Q96JC4 524 aa9.98□□□□□ -0.81
HIF3A-215ENST00000533145 TRAPPC1Q9Y5R8 145 aa9.98□□□□□ -0.81
HIF3A-215ENST00000533145 TENM3Q9P273 2699 aa9.97□□□□□ -0.81
HIF3A-215ENST00000533145 RPS10P46783 165 aaKnown RBP9.97□□□□□ -0.81
HIF3A-215ENST00000533145 MRPL51Q4U2R6 128 aaKnown RBP9.97□□□□□ -0.81
HIF3A-215ENST00000533145 IGHV3-53P01767 116 aa9.96□□□□□ -0.82
HIF3A-215ENST00000533145 APCSP02743 223 aa9.96□□□□□ -0.82
HIF3A-215ENST00000533145 PPBPP02775 128 aa9.96□□□□□ -0.82
HIF3A-215ENST00000533145 ATP5G1P05496 136 aa9.96□□□□□ -0.82
HIF3A-215ENST00000533145 SLAQ13239 276 aa9.96□□□□□ -0.82
HIF3A-215ENST00000533145 FHL2Q14192 279 aa9.96□□□□□ -0.82
HIF3A-215ENST00000533145 FAM74A4Q5TZK3 123 aa9.96□□□□□ -0.82
HIF3A-215ENST00000533145 C11orf45Q8TAV5 145 aa9.96□□□□□ -0.82
HIF3A-215ENST00000533145 MRAP2Q96G30 205 aa9.96□□□□□ -0.82
HIF3A-215ENST00000533145 MRPL18Q9H0U6 180 aaKnown RBP9.96□□□□□ -0.82
HIF3A-215ENST00000533145 U3KQK5 164 aa9.96□□□□□ -0.82
HIF3A-215ENST00000533145 PHOX2AO14813 284 aa9.95□□□□□ -0.82
HIF3A-215ENST00000533145 GATA1P15976 413 aaPredicted RBP9.95□□□□□ -0.82
HIF3A-215ENST00000533145 FABP9Q0Z7S8 132 aa9.95□□□□□ -0.82
HIF3A-215ENST00000533145 PRKDCP78527 4128 aaKnown RBP9.94□□□□□ -0.82
HIF3A-215ENST00000533145 TRBV6-4A0A1B0GX49 114 aa9.94□□□□□ -0.82
HIF3A-215ENST00000533145 MGPP08493 103 aa9.94□□□□□ -0.82
HIF3A-215ENST00000533145 IGHV3-73A0A0B4J1V6 119 aa9.93□□□□□ -0.82
HIF3A-215ENST00000533145 TRGV4A0A0C4DH28 118 aa9.93□□□□□ -0.82
HIF3A-215ENST00000533145 F5H697 171 aa9.93□□□□□ -0.82
HIF3A-215ENST00000533145 H7C1H1 209 aa9.93□□□□□ -0.82
HIF3A-215ENST00000533145 M0QY20 66 aa9.93□□□□□ -0.82
HIF3A-215ENST00000533145 TRGC2P03986 189 aa9.93□□□□□ -0.82
HIF3A-215ENST00000533145 ZNF56Q15929 161 aa9.93□□□□□ -0.82
HIF3A-215ENST00000533145 SUMO4Q6EEV6 95 aa9.93□□□□□ -0.82
HIF3A-215ENST00000533145 Q6ZSN1 163 aa9.93□□□□□ -0.82
HIF3A-215ENST00000533145 PPP1R17O96001 155 aa9.92□□□□□ -0.82
HIF3A-215ENST00000533145 HOXA5P20719 270 aa9.92□□□□□ -0.82
HIF3A-215ENST00000533145 CKS2P33552 79 aa9.92□□□□□ -0.82
HIF3A-215ENST00000533145 NANOS2P60321 138 aaKnown RBP9.92□□□□□ -0.82
HIF3A-215ENST00000533145 Q6ZTC4 211 aa9.92□□□□□ -0.82
HIF3A-215ENST00000533145 ORMDL3Q8N138 153 aa9.92□□□□□ -0.82
HIF3A-215ENST00000533145 PRO0255Q9UI72 69 aa9.92□□□□□ -0.82
HIF3A-215ENST00000533145 LAMTOR2Q9Y2Q5 125 aa9.92□□□□□ -0.82
HIF3A-215ENST00000533145 COL7A1Q02388 2944 aa9.91□□□□□ -0.82
HIF3A-215ENST00000533145 TRBV10-1A0A0K0K1A3 114 aa9.91□□□□□ -0.82
HIF3A-215ENST00000533145 PRSS47A8MTI9 375 aa9.91□□□□□ -0.82
HIF3A-215ENST00000533145 D6R8Y8 96 aa9.91□□□□□ -0.82
HIF3A-215ENST00000533145 CRYBA4P53673 196 aa9.91□□□□□ -0.82
HIF3A-215ENST00000533145 KIAA1644Q3SXP7 199 aa9.91□□□□□ -0.82
HIF3A-215ENST00000533145 SLC25A29Q8N8R3 303 aa9.91□□□□□ -0.82
HIF3A-215ENST00000533145 NRACQ8N912 160 aa9.91□□□□□ -0.82
HIF3A-215ENST00000533145 ALKBH7Q9BT30 221 aaPredicted RBP9.91□□□□□ -0.82
HIF3A-215ENST00000533145 NIT2Q9NQR4 276 aa9.91□□□□□ -0.82
HIF3A-215ENST00000533145 HHLA3Q9XRX5 114 aa9.91□□□□□ -0.82
HIF3A-215ENST00000533145 TRAV26-2A0A0B4J265 109 aa9.9□□□□□ -0.82
HIF3A-215ENST00000533145 TRBV6-5A0A0K0K1A5 114 aa9.9□□□□□ -0.82
HIF3A-215ENST00000533145 K7EQD1 137 aa9.9□□□□□ -0.82
HIF3A-215ENST00000533145 GAS8-AS1O95177 125 aa9.9□□□□□ -0.82
HIF3A-215ENST00000533145 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.9□□□□□ -0.82
HIF3A-215ENST00000533145 DNAJC30Q96LL9 226 aa9.9□□□□□ -0.82
HIF3A-215ENST00000533145 PRELID3AQ96N28 172 aa9.9□□□□□ -0.82
HIF3A-215ENST00000533145 TRAV10A0A0B4J240 114 aa9.89□□□□□ -0.83
HIF3A-215ENST00000533145 SMKR1H3BMG3 65 aa9.89□□□□□ -0.83
HIF3A-215ENST00000533145 H3BNG1 76 aa9.89□□□□□ -0.83
HIF3A-215ENST00000533145 RHOHQ15669 191 aa9.89□□□□□ -0.83
HIF3A-215ENST00000533145 PRADC1Q9BSG0 188 aa9.89□□□□□ -0.83
HIF3A-215ENST00000533145 DEFB131BA0A096LNP1 70 aa9.88□□□□□ -0.83
HIF3A-215ENST00000533145 F5H768 121 aa9.88□□□□□ -0.83
HIF3A-215ENST00000533145 TNFRSF6BO95407 300 aa9.88□□□□□ -0.83
HIF3A-215ENST00000533145 NCR2O95944 276 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms