RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.68□□□□□ -1.02
PTPRK-221ENST00000532331 EML6Q6ZMW3 1958 aa8.68□□□□□ -1.02
PTPRK-221ENST00000532331 XCL1P47992 114 aa8.68□□□□□ -1.02
PTPRK-221ENST00000532331 WI2-2373I1.2A0A1W2PRP0 233 aa8.67□□□□□ -1.02
PTPRK-221ENST00000532331 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.67□□□□□ -1.02
PTPRK-221ENST00000532331 IGKV2-29A2NJV5 120 aaPredicted RBP8.67□□□□□ -1.02
PTPRK-221ENST00000532331 IGHV3-30P01768 117 aa8.67□□□□□ -1.02
PTPRK-221ENST00000532331 IGHV3-33P01772 117 aa8.67□□□□□ -1.02
PTPRK-221ENST00000532331 IGHV3-30-3P0DP02 117 aa8.67□□□□□ -1.02
PTPRK-221ENST00000532331 IGHV3-30-5P0DP03 117 aa8.67□□□□□ -1.02
PTPRK-221ENST00000532331 TAL2Q16559 108 aa8.67□□□□□ -1.02
PTPRK-221ENST00000532331 IGF1P05019 195 aa8.67□□□□□ -1.02
PTPRK-221ENST00000532331 RPL32P62910 135 aaKnown RBP8.67□□□□□ -1.02
PTPRK-221ENST00000532331 SMR3AQ99954 134 aa8.67□□□□□ -1.02
PTPRK-221ENST00000532331 UBE2BP63146 152 aa8.67□□□□□ -1.02
PTPRK-221ENST00000532331 SPANXA1Q9NS26 97 aa8.67□□□□□ -1.02
PTPRK-221ENST00000532331 TM2D2Q9BX73 214 aa8.67□□□□□ -1.02
PTPRK-221ENST00000532331 PRO1854Q9UHT4 67 aa8.67□□□□□ -1.02
PTPRK-221ENST00000532331 K7EQD1 137 aa8.66□□□□□ -1.02
PTPRK-221ENST00000532331 FGF6P10767 208 aa8.66□□□□□ -1.02
PTPRK-221ENST00000532331 C9orf118A6NHY6 69 aa8.66□□□□□ -1.02
PTPRK-221ENST00000532331 DKK2Q9UBU2 259 aa8.66□□□□□ -1.02
PTPRK-221ENST00000532331 NAV2Q8IVL1 2488 aa8.66□□□□□ -1.02
PTPRK-221ENST00000532331 KMT2EQ8IZD2 1858 aa8.66□□□□□ -1.02
PTPRK-221ENST00000532331 MORN5Q5VZ52 161 aa8.66□□□□□ -1.02
PTPRK-221ENST00000532331 UNQ9165/PRO28630Q6UXU0 137 aa8.66□□□□□ -1.02
PTPRK-221ENST00000532331 RNF183Q96D59 192 aa8.66□□□□□ -1.02
PTPRK-221ENST00000532331 LINC01548A6NM66 108 aa8.65□□□□□ -1.02
PTPRK-221ENST00000532331 SUMO4Q6EEV6 95 aa8.65□□□□□ -1.02
PTPRK-221ENST00000532331 CEND1Q8N111 149 aa8.65□□□□□ -1.02
PTPRK-221ENST00000532331 MAP6D1Q9H9H5 199 aa8.65□□□□□ -1.02
PTPRK-221ENST00000532331 HHLA3Q9XRX5 114 aa8.65□□□□□ -1.02
PTPRK-221ENST00000532331 SONP18583 2426 aaKnown RBP8.65□□□□□ -1.02
PTPRK-221ENST00000532331 LINC01006Q8NI28 216 aa8.65□□□□□ -1.02
PTPRK-221ENST00000532331 ZNF747Q9BV97 191 aa8.65□□□□□ -1.02
PTPRK-221ENST00000532331 FREM1Q5H8C1 2179 aa8.65□□□□□ -1.02
PTPRK-221ENST00000532331 ZNF124Q15973 351 aa8.65□□□□□ -1.03
PTPRK-221ENST00000532331 SLC25A29Q8N8R3 303 aa8.65□□□□□ -1.03
PTPRK-221ENST00000532331 LINC00574Q9H8X3 128 aa8.65□□□□□ -1.03
PTPRK-221ENST00000532331 RBMY1FQ15415 496 aaKnown RBP8.64□□□□□ -1.03
PTPRK-221ENST00000532331 EDA2RQ9HAV5 297 aa8.64□□□□□ -1.03
PTPRK-221ENST00000532331 SIVA1O15304 175 aa8.64□□□□□ -1.03
PTPRK-221ENST00000532331 GATA1P15976 413 aaPredicted RBP8.64□□□□□ -1.03
PTPRK-221ENST00000532331 DAZ2Q13117 558 aaKnown RBP8.64□□□□□ -1.03
PTPRK-221ENST00000532331 C9orf47Q6ZRZ4 202 aa8.64□□□□□ -1.03
PTPRK-221ENST00000532331 DAZ4Q86SG3 579 aaKnown RBP8.64□□□□□ -1.03
PTPRK-221ENST00000532331 BBC3Q96PG8 261 aaPredicted RBP8.64□□□□□ -1.03
PTPRK-221ENST00000532331 FANCD2OSQ96PS1 177 aa8.64□□□□□ -1.03
PTPRK-221ENST00000532331 DAZ3Q9NR90 486 aaKnown RBP8.64□□□□□ -1.03
PTPRK-221ENST00000532331 LGALS9O00182 355 aa8.63□□□□□ -1.03
PTPRK-221ENST00000532331 COL5A1P20908 1838 aaPredicted RBP8.63□□□□□ -1.03
PTPRK-221ENST00000532331 RPL39LQ96EH5 51 aaKnown RBP8.63□□□□□ -1.03
PTPRK-221ENST00000532331 FAM167A-AS1Q96KT0 104 aa8.63□□□□□ -1.03
PTPRK-221ENST00000532331 IGLV2-14P01704 120 aa8.63□□□□□ -1.03
PTPRK-221ENST00000532331 BOD1L2Q8IYS8 172 aa8.63□□□□□ -1.03
PTPRK-221ENST00000532331 HERV-K104P63124 156 aa8.63□□□□□ -1.03
PTPRK-221ENST00000532331 BVES-AS1Q5T3Y7 98 aa8.63□□□□□ -1.03
PTPRK-221ENST00000532331 PLCE1Q9P212 2302 aa8.63□□□□□ -1.03
PTPRK-221ENST00000532331 Q9H8V8 135 aa8.63□□□□□ -1.03
PTPRK-221ENST00000532331 PSMG3-AS1Q96PY0 264 aa8.62□□□□□ -1.03
PTPRK-221ENST00000532331 UBL5Q9BZL1 73 aa8.62□□□□□ -1.03
PTPRK-221ENST00000532331 E7EUB6 86 aa8.62□□□□□ -1.03
PTPRK-221ENST00000532331 GTSF1LQ9H1H1 148 aa8.62□□□□□ -1.03
PTPRK-221ENST00000532331 CCDC168Q8NDH2 2452 aa8.62□□□□□ -1.03
PTPRK-221ENST00000532331 PRAC2D3DTV9 90 aa8.62□□□□□ -1.03
PTPRK-221ENST00000532331 DEFB114Q30KQ6 69 aa8.61□□□□□ -1.03
PTPRK-221ENST00000532331 UTF1Q5T230 341 aa8.61□□□□□ -1.03
PTPRK-221ENST00000532331 C5orf38Q86SI9 138 aa8.61□□□□□ -1.03
PTPRK-221ENST00000532331 Q8N1Y9 231 aa8.61□□□□□ -1.03
PTPRK-221ENST00000532331 CCDC140Q96MF4 163 aa8.61□□□□□ -1.03
PTPRK-221ENST00000532331 DSCR8Q96T75 97 aa8.61□□□□□ -1.03
PTPRK-221ENST00000532331 NUP210LQ5VU65 1888 aa8.61□□□□□ -1.03
PTPRK-221ENST00000532331 TMEM263Q8WUH6 116 aaKnown RBP8.61□□□□□ -1.03
PTPRK-221ENST00000532331 ZNF702PQ9H963 129 aa8.61□□□□□ -1.03
PTPRK-221ENST00000532331 AMTNQ6UX39 209 aa8.61□□□□□ -1.03
PTPRK-221ENST00000532331 MED12LQ86YW9 2145 aa8.61□□□□□ -1.03
PTPRK-221ENST00000532331 PPDPFLQ8WWR9 84 aa8.61□□□□□ -1.03
PTPRK-221ENST00000532331 F8W1H4 67 aa8.61□□□□□ -1.03
PTPRK-221ENST00000532331 ZFP2Q6ZN57 461 aa8.61□□□□□ -1.03
PTPRK-221ENST00000532331 MSRB1Q9NZV6 116 aa8.61□□□□□ -1.03
PTPRK-221ENST00000532331 HIVEP3Q5T1R4 2406 aa8.61□□□□□ -1.03
PTPRK-221ENST00000532331 C15orf53Q8NAA6 179 aa8.6□□□□□ -1.03
PTPRK-221ENST00000532331 A0A0J9YX75 114 aa8.6□□□□□ -1.03
PTPRK-221ENST00000532331 RPL18AQ02543 176 aaKnown RBP8.6□□□□□ -1.03
PTPRK-221ENST00000532331 MED14OSP0DP75 135 aa8.6□□□□□ -1.03
PTPRK-221ENST00000532331 EBI3Q14213 229 aa8.6□□□□□ -1.03
PTPRK-221ENST00000532331 PRSS47A8MTI9 375 aa8.59□□□□□ -1.03
PTPRK-221ENST00000532331 CARD19Q96LW7 228 aa8.59□□□□□ -1.03
PTPRK-221ENST00000532331 CAMK2N2Q96S95 79 aa8.59□□□□□ -1.03
PTPRK-221ENST00000532331 K7EP34 96 aa8.59□□□□□ -1.03
PTPRK-221ENST00000532331 MRPL36Q9P0J6 103 aaKnown RBP8.59□□□□□ -1.03
PTPRK-221ENST00000532331 COX7A2LO14548 114 aa8.59□□□□□ -1.03
PTPRK-221ENST00000532331 FAM110AQ9BQ89 295 aa8.59□□□□□ -1.03
PTPRK-221ENST00000532331 PRO0255Q9UI72 69 aa8.59□□□□□ -1.03
PTPRK-221ENST00000532331 IGLV10-54A0A075B6I4 117 aa8.59□□□□□ -1.03
PTPRK-221ENST00000532331 A0A1W2PPM0 123 aa8.59□□□□□ -1.03
PTPRK-221ENST00000532331 SMIM9A6NGZ8 99 aa8.59□□□□□ -1.03
PTPRK-221ENST00000532331 HAMPP81172 84 aa8.59□□□□□ -1.03
PTPRK-221ENST00000532331 ZNF503Q96F45 646 aa8.59□□□□□ -1.03
PTPRK-221ENST00000532331 LY6LH3BQJ8 138 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms