RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 Q6AWC8 147 aa11.85□□□□□ -0.51
PKP3-208ENST00000531857 ZFP82Q8N141 532 aa11.85□□□□□ -0.51
PKP3-208ENST00000531857 LINC00479Q96M42 142 aa11.85□□□□□ -0.51
PKP3-208ENST00000531857 RPP21Q9H633 154 aaKnown RBP11.85□□□□□ -0.51
PKP3-208ENST00000531857 RPH3ALQ9UNE2 315 aa11.85□□□□□ -0.51
PKP3-208ENST00000531857 TRAPPC1Q9Y5R8 145 aa11.85□□□□□ -0.51
PKP3-208ENST00000531857 C19orf71A6NCJ1 209 aa11.84□□□□□ -0.51
PKP3-208ENST00000531857 NPIPB6E9PJ23 425 aa11.84□□□□□ -0.51
PKP3-208ENST00000531857 SIVA1O15304 175 aa11.84□□□□□ -0.51
PKP3-208ENST00000531857 HIST1H2BKO60814 126 aa11.84□□□□□ -0.51
PKP3-208ENST00000531857 IGLV2-11P01706 119 aa11.84□□□□□ -0.51
PKP3-208ENST00000531857 HIST1H2BJP06899 126 aa11.84□□□□□ -0.51
PKP3-208ENST00000531857 HIST1H2BOP23527 126 aa11.84□□□□□ -0.51
PKP3-208ENST00000531857 HIST1H2BBP33778 126 aa11.84□□□□□ -0.51
PKP3-208ENST00000531857 HIST1H2BDP58876 126 aa11.84□□□□□ -0.51
PKP3-208ENST00000531857 HIST1H2BCP62807 126 aa11.84□□□□□ -0.51
PKP3-208ENST00000531857 HIST2H2BEQ16778 126 aa11.84□□□□□ -0.51
PKP3-208ENST00000531857 COA6Q5JTJ3 125 aaKnown RBP11.84□□□□□ -0.51
PKP3-208ENST00000531857 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.84□□□□□ -0.51
PKP3-208ENST00000531857 HIST1H2BHQ93079 126 aa11.84□□□□□ -0.51
PKP3-208ENST00000531857 HIST1H2BNQ99877 126 aa11.84□□□□□ -0.51
PKP3-208ENST00000531857 HIST1H2BMQ99879 126 aa11.84□□□□□ -0.51
PKP3-208ENST00000531857 RNASE7Q9H1E1 156 aaKnown RBP11.84□□□□□ -0.51
PKP3-208ENST00000531857 A0A1B0GW15 77 aa11.83□□□□□ -0.52
PKP3-208ENST00000531857 PHOX2AO14813 284 aa11.83□□□□□ -0.52
PKP3-208ENST00000531857 HLA-DQA1P01909 254 aa11.83□□□□□ -0.52
PKP3-208ENST00000531857 TRGC1P0CF51 173 aa11.83□□□□□ -0.52
PKP3-208ENST00000531857 RPS20P60866 119 aaKnown RBP11.83□□□□□ -0.52
PKP3-208ENST00000531857 SNRPEP62304 92 aaKnown RBP11.83□□□□□ -0.52
PKP3-208ENST00000531857 Q5VSD8 79 aa11.83□□□□□ -0.52
PKP3-208ENST00000531857 PRNTQ86SH4 94 aa11.83□□□□□ -0.52
PKP3-208ENST00000531857 C11orf72Q8NBR9 251 aa11.83□□□□□ -0.52
PKP3-208ENST00000531857 GSN-AS1Q9NRJ2 163 aa11.83□□□□□ -0.52
PKP3-208ENST00000531857 LENEPQ9Y5L5 61 aa11.83□□□□□ -0.52
PKP3-208ENST00000531857 TRGV2A0A075B6R0 118 aa11.82□□□□□ -0.52
PKP3-208ENST00000531857 LEPP41159 167 aa11.82□□□□□ -0.52
PKP3-208ENST00000531857 FOXA3P55318 350 aaPredicted RBP11.82□□□□□ -0.52
PKP3-208ENST00000531857 KRTAP10-1P60331 282 aa11.82□□□□□ -0.52
PKP3-208ENST00000531857 FRZBQ92765 325 aa11.82□□□□□ -0.52
PKP3-208ENST00000531857 NXPH4O95158 308 aa11.81□□□□□ -0.52
PKP3-208ENST00000531857 DNAH10OSP0CZ25 163 aa11.81□□□□□ -0.52
PKP3-208ENST00000531857 FABP9Q0Z7S8 132 aa11.81□□□□□ -0.52
PKP3-208ENST00000531857 C18orf15Q96N68 181 aa11.81□□□□□ -0.52
PKP3-208ENST00000531857 ODF3Q96PU9 254 aa11.81□□□□□ -0.52
PKP3-208ENST00000531857 TRGV1A0A0A0MS02 117 aa11.8□□□□□ -0.52
PKP3-208ENST00000531857 TRBV7-9A0A0J9YWB2 115 aa11.8□□□□□ -0.52
PKP3-208ENST00000531857 EREGO14944 169 aa11.8□□□□□ -0.52
PKP3-208ENST00000531857 NDUFA6P56556 154 aa11.8□□□□□ -0.52
PKP3-208ENST00000531857 PRR27Q6MZM9 219 aa11.8□□□□□ -0.52
PKP3-208ENST00000531857 CDPF1Q6NVV7 123 aa11.8□□□□□ -0.52
PKP3-208ENST00000531857 FAT1Q14517 4588 aa11.8□□□□□ -0.52
PKP3-208ENST00000531857 FLG2Q5D862 2391 aaPredicted RBP11.79□□□□□ -0.52
PKP3-208ENST00000531857 SRRM2Q9UQ35 2752 aaKnown RBP11.79□□□□□ -0.52
PKP3-208ENST00000531857 PAX4O43316 350 aa11.78□□□□□ -0.52
PKP3-208ENST00000531857 ZNF324O75467 553 aaPredicted RBP11.78□□□□□ -0.52
PKP3-208ENST00000531857 S100A2P29034 98 aa11.78□□□□□ -0.52
PKP3-208ENST00000531857 ERCC8Q13216 396 aa11.78□□□□□ -0.52
PKP3-208ENST00000531857 SMUG1Q53HV7 270 aa11.78□□□□□ -0.52
PKP3-208ENST00000531857 FAM162BQ5T6X4 162 aa11.78□□□□□ -0.52
PKP3-208ENST00000531857 NHLRC2Q8NBF2 726 aa11.78□□□□□ -0.52
PKP3-208ENST00000531857 BORCS7Q96B45 105 aa11.78□□□□□ -0.52
PKP3-208ENST00000531857 LINC00477Q96M19 166 aa11.78□□□□□ -0.52
PKP3-208ENST00000531857 ICOSQ9Y6W8 199 aa11.78□□□□□ -0.52
PKP3-208ENST00000531857 A0A087WTM6 91 aa11.77□□□□□ -0.53
PKP3-208ENST00000531857 C7orf71A4D174 169 aa11.77□□□□□ -0.53
PKP3-208ENST00000531857 M0R3E3 92 aa11.77□□□□□ -0.53
PKP3-208ENST00000531857 SPINK4O60575 86 aa11.77□□□□□ -0.53
PKP3-208ENST00000531857 IGHV3-53P01767 116 aa11.77□□□□□ -0.53
PKP3-208ENST00000531857 SMR3BP02814 79 aaPredicted RBP11.77□□□□□ -0.53
PKP3-208ENST00000531857 TMEM78Q5T7P6 136 aa11.77□□□□□ -0.53
PKP3-208ENST00000531857 C9orf47Q6ZRZ4 202 aa11.77□□□□□ -0.53
PKP3-208ENST00000531857 NUP35Q8NFH5 326 aa11.77□□□□□ -0.53
PKP3-208ENST00000531857 VPS13BQ7Z7G8 4022 aa11.76□□□□□ -0.53
PKP3-208ENST00000531857 HIGD1CA8MV81 97 aa11.76□□□□□ -0.53
PKP3-208ENST00000531857 KLLNB2CW77 178 aa11.76□□□□□ -0.53
PKP3-208ENST00000531857 AKR1D1P51857 326 aa11.76□□□□□ -0.53
PKP3-208ENST00000531857 RIGQ13278 110 aa11.76□□□□□ -0.53
PKP3-208ENST00000531857 DMRTA1Q5VZB9 504 aa11.76□□□□□ -0.53
PKP3-208ENST00000531857 LYPD5Q6UWN5 251 aa11.76□□□□□ -0.53
PKP3-208ENST00000531857 OR2D3Q8NGH3 330 aa11.76□□□□□ -0.53
PKP3-208ENST00000531857 LINC00467Q9BRT7 94 aa11.76□□□□□ -0.53
PKP3-208ENST00000531857 MRPL18Q9H0U6 180 aaKnown RBP11.76□□□□□ -0.53
PKP3-208ENST00000531857 MDFICQ9P1T7 246 aa11.76□□□□□ -0.53
PKP3-208ENST00000531857 MYCBP2O75592 4640 aa11.76□□□□□ -0.53
PKP3-208ENST00000531857 TRAV8-1A0A0A6YYK1 113 aa11.75□□□□□ -0.53
PKP3-208ENST00000531857 FABP5P3A8MUU1 101 aa11.75□□□□□ -0.53
PKP3-208ENST00000531857 SMIM6P0DI80 62 aa11.75□□□□□ -0.53
PKP3-208ENST00000531857 RNASE4P34096 147 aaKnown RBP11.75□□□□□ -0.53
PKP3-208ENST00000531857 ZNF138P52744 262 aa11.75□□□□□ -0.53
PKP3-208ENST00000531857 TCL1AP56279 114 aa11.75□□□□□ -0.53
PKP3-208ENST00000531857 HBBP68871 147 aa11.75□□□□□ -0.53
PKP3-208ENST00000531857 Q0VG73 95 aa11.75□□□□□ -0.53
PKP3-208ENST00000531857 ANXA2RQ3ZCQ2 193 aa11.75□□□□□ -0.53
PKP3-208ENST00000531857 Q6ZQT7 251 aa11.75□□□□□ -0.53
PKP3-208ENST00000531857 ZC2HC1AQ96GY0 325 aa11.75□□□□□ -0.53
PKP3-208ENST00000531857 FAM19A4Q96LR4 140 aa11.75□□□□□ -0.53
PKP3-208ENST00000531857 MRPL16Q9NX20 251 aaKnown RBP11.75□□□□□ -0.53
PKP3-208ENST00000531857 TP53TG3Q9ULZ0 132 aa11.75□□□□□ -0.53
PKP3-208ENST00000531857 OR10J3Q5JRS4 329 aa11.74□□□□□ -0.53
PKP3-208ENST00000531857 TMEM136Q6ZRR5 245 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms