RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 GRIFINA4D1Z8 144 aa7.81□□□□□ -1.16
CAPN1-221ENST00000531068 ZNF324O75467 553 aaPredicted RBP7.81□□□□□ -1.16
CAPN1-221ENST00000531068 HTN1P15515 57 aa7.81□□□□□ -1.16
CAPN1-221ENST00000531068 HTN3P15516 51 aa7.81□□□□□ -1.16
CAPN1-221ENST00000531068 SRIP30626 198 aa7.81□□□□□ -1.16
CAPN1-221ENST00000531068 LEPP41159 167 aa7.81□□□□□ -1.16
CAPN1-221ENST00000531068 SLAQ13239 276 aa7.81□□□□□ -1.16
CAPN1-221ENST00000531068 PRR27Q6MZM9 219 aa7.81□□□□□ -1.16
CAPN1-221ENST00000531068 TEX43Q6ZNM6 134 aa7.81□□□□□ -1.16
CAPN1-221ENST00000531068 OR2D3Q8NGH3 330 aa7.81□□□□□ -1.16
CAPN1-221ENST00000531068 C18orf32Q8TCD1 76 aa7.81□□□□□ -1.16
CAPN1-221ENST00000531068 CHCHD1Q96BP2 118 aaKnown RBP7.81□□□□□ -1.16
CAPN1-221ENST00000531068 C16orf74Q96GX8 76 aa7.81□□□□□ -1.16
CAPN1-221ENST00000531068 ZC2HC1AQ96GY0 325 aa7.81□□□□□ -1.16
CAPN1-221ENST00000531068 LINC00477Q96M19 166 aa7.81□□□□□ -1.16
CAPN1-221ENST00000531068 ODF3Q96PU9 254 aa7.81□□□□□ -1.16
CAPN1-221ENST00000531068 RPH3ALQ9UNE2 315 aa7.81□□□□□ -1.16
CAPN1-221ENST00000531068 LENEPQ9Y5L5 61 aa7.81□□□□□ -1.16
CAPN1-221ENST00000531068 ALMS1Q8TCU4 4167 aa7.81□□□□□ -1.16
CAPN1-221ENST00000531068 HYDINQ4G0P3 5121 aa7.8□□□□□ -1.16
CAPN1-221ENST00000531068 AZU1P20160 251 aa7.8□□□□□ -1.16
CAPN1-221ENST00000531068 DDTP30046 118 aa7.8□□□□□ -1.16
CAPN1-221ENST00000531068 ZNF138P52744 262 aa7.8□□□□□ -1.16
CAPN1-221ENST00000531068 CDPF1Q6NVV7 123 aa7.8□□□□□ -1.16
CAPN1-221ENST00000531068 ZNF664Q8N3J9 261 aa7.8□□□□□ -1.16
CAPN1-221ENST00000531068 ZFAND2AQ8N6M9 145 aa7.8□□□□□ -1.16
CAPN1-221ENST00000531068 POM121L12Q8N7R1 296 aa7.8□□□□□ -1.16
CAPN1-221ENST00000531068 SAMD10Q9BYL1 202 aa7.8□□□□□ -1.16
CAPN1-221ENST00000531068 TIMM8BQ9Y5J9 83 aaPredicted RBP7.8□□□□□ -1.16
CAPN1-221ENST00000531068 CBY3A6NI87 242 aa7.79□□□□□ -1.16
CAPN1-221ENST00000531068 SPINK4O60575 86 aa7.79□□□□□ -1.16
CAPN1-221ENST00000531068 SCGB1D1O95968 90 aa7.79□□□□□ -1.16
CAPN1-221ENST00000531068 PRM2P04554 102 aa7.79□□□□□ -1.16
CAPN1-221ENST00000531068 OR5AL1P0C617 328 aa7.79□□□□□ -1.16
CAPN1-221ENST00000531068 DEFB130BP0DP73 79 aa7.79□□□□□ -1.16
CAPN1-221ENST00000531068 DEFB130AP0DP74 79 aa7.79□□□□□ -1.16
CAPN1-221ENST00000531068 ZNF80P51504 273 aaPredicted RBP7.79□□□□□ -1.16
CAPN1-221ENST00000531068 Q8TAT8 98 aa7.79□□□□□ -1.16
CAPN1-221ENST00000531068 C8orf49Q96NF6 230 aa7.79□□□□□ -1.16
CAPN1-221ENST00000531068 PRR9Q5T870 116 aa7.78□□□□□ -1.16
CAPN1-221ENST00000531068 TMEM263Q8WUH6 116 aaKnown RBP7.78□□□□□ -1.16
CAPN1-221ENST00000531068 BORCS7Q96B45 105 aa7.78□□□□□ -1.16
CAPN1-221ENST00000531068 PGLYRP4Q96LB8 373 aa7.78□□□□□ -1.16
CAPN1-221ENST00000531068 CNFNQ9BYD5 112 aa7.78□□□□□ -1.16
CAPN1-221ENST00000531068 C20orf202A1L168 122 aa7.77□□□□□ -1.17
CAPN1-221ENST00000531068 FABP5P3A8MUU1 101 aa7.77□□□□□ -1.17
CAPN1-221ENST00000531068 KLLNB2CW77 178 aa7.77□□□□□ -1.17
CAPN1-221ENST00000531068 F5H768 121 aa7.77□□□□□ -1.17
CAPN1-221ENST00000531068 ATP5G1P05496 136 aa7.77□□□□□ -1.17
CAPN1-221ENST00000531068 AMTP48728 403 aa7.77□□□□□ -1.17
CAPN1-221ENST00000531068 PMCHL1Q16048 86 aa7.77□□□□□ -1.17
CAPN1-221ENST00000531068 KIAA1644Q3SXP7 199 aa7.77□□□□□ -1.17
CAPN1-221ENST00000531068 C15orf53Q8NAA6 179 aa7.77□□□□□ -1.17
CAPN1-221ENST00000531068 NOP10Q9NPE3 64 aaKnown RBP7.77□□□□□ -1.17
CAPN1-221ENST00000531068 TRAV12-3A0A0B4J271 114 aa7.76□□□□□ -1.17
CAPN1-221ENST00000531068 PLAC8L1A1L4L8 177 aa7.76□□□□□ -1.17
CAPN1-221ENST00000531068 F2Z2F3 143 aa7.76□□□□□ -1.17
CAPN1-221ENST00000531068 HSBP1O75506 76 aa7.76□□□□□ -1.17
CAPN1-221ENST00000531068 CTRLP40313 264 aa7.76□□□□□ -1.17
CAPN1-221ENST00000531068 CAMPP49913 170 aa7.76□□□□□ -1.17
CAPN1-221ENST00000531068 TMEM78Q5T7P6 136 aa7.76□□□□□ -1.17
CAPN1-221ENST00000531068 Q6ZQT7 251 aa7.76□□□□□ -1.17
CAPN1-221ENST00000531068 NIT1Q86X76 327 aa7.76□□□□□ -1.17
CAPN1-221ENST00000531068 UBE2DNLQ8IWF7 75 aa7.76□□□□□ -1.17
CAPN1-221ENST00000531068 RNASE8Q8TDE3 154 aaKnown RBP7.76□□□□□ -1.17
CAPN1-221ENST00000531068 C14orf144Q96I85 54 aa7.76□□□□□ -1.17
CAPN1-221ENST00000531068 C11orf21Q9P2W6 132 aa7.76□□□□□ -1.17
CAPN1-221ENST00000531068 J3KRW8 73 aa7.75□□□□□ -1.17
CAPN1-221ENST00000531068 SH2D1AO60880 128 aa7.75□□□□□ -1.17
CAPN1-221ENST00000531068 IGLC6P0CF74 106 aa7.75□□□□□ -1.17
CAPN1-221ENST00000531068 KIR3DS1Q14943 382 aa7.75□□□□□ -1.17
CAPN1-221ENST00000531068 LINC01559Q495D7 138 aa7.75□□□□□ -1.17
CAPN1-221ENST00000531068 C7orf71A4D174 169 aa7.74□□□□□ -1.17
CAPN1-221ENST00000531068 LINC00614P0C842 121 aa7.74□□□□□ -1.17
CAPN1-221ENST00000531068 RNASE4P34096 147 aaKnown RBP7.74□□□□□ -1.17
CAPN1-221ENST00000531068 LINC00336Q6ZUF6 198 aa7.74□□□□□ -1.17
CAPN1-221ENST00000531068 Q8N976 141 aa7.74□□□□□ -1.17
CAPN1-221ENST00000531068 LINC00467Q9BRT7 94 aa7.74□□□□□ -1.17
CAPN1-221ENST00000531068 LAMTOR2Q9Y2Q5 125 aa7.74□□□□□ -1.17
CAPN1-221ENST00000531068 IGKV3D-20A0A0C4DH25 116 aa7.73□□□□□ -1.17
CAPN1-221ENST00000531068 PPBPP02775 128 aa7.73□□□□□ -1.17
CAPN1-221ENST00000531068 DAZ2Q13117 558 aaKnown RBP7.73□□□□□ -1.17
CAPN1-221ENST00000531068 LGALS9BQ3B8N2 356 aa7.73□□□□□ -1.17
CAPN1-221ENST00000531068 FAM104BQ5XKR9 115 aa7.73□□□□□ -1.17
CAPN1-221ENST00000531068 MIEN1Q9BRT3 115 aa7.73□□□□□ -1.17
CAPN1-221ENST00000531068 C2orf88Q9BSF0 95 aa7.73□□□□□ -1.17
CAPN1-221ENST00000531068 VAMP8Q9BV40 100 aa7.73□□□□□ -1.17
CAPN1-221ENST00000531068 EPPK1P58107 5090 aaKnown RBP7.73□□□□□ -1.17
CAPN1-221ENST00000531068 BIRC6Q9NR09 4857 aa7.72□□□□□ -1.17
CAPN1-221ENST00000531068 KMT2AQ03164 3969 aa7.72□□□□□ -1.17
CAPN1-221ENST00000531068 NUDT3O95989 172 aa7.72□□□□□ -1.17
CAPN1-221ENST00000531068 ARMS2P0C7Q2 107 aa7.72□□□□□ -1.17
CAPN1-221ENST00000531068 C3orf79P0CE67 100 aa7.72□□□□□ -1.17
CAPN1-221ENST00000531068 BTF3P20290 206 aaKnown RBP7.72□□□□□ -1.17
CAPN1-221ENST00000531068 ANXA2RQ3ZCQ2 193 aa7.72□□□□□ -1.17
CAPN1-221ENST00000531068 SPATA12Q7Z6I5 190 aa7.72□□□□□ -1.17
CAPN1-221ENST00000531068 LINC00612Q8N6U2 182 aa7.72□□□□□ -1.17
CAPN1-221ENST00000531068 FER1L6-AS1Q8NA97 138 aa7.72□□□□□ -1.17
CAPN1-221ENST00000531068 URB1-AS1Q96HZ7 61 aa7.72□□□□□ -1.17
CAPN1-221ENST00000531068 SSBP4Q9BWG4 385 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms