RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 RCL1Q9Y2P8 373 aaKnown RBP2.35□□□□□ -2.03
PTPRC-213ENST00000529828 CARHSP1Q9Y2V2 147 aaKnown RBP2.35□□□□□ -2.03
PTPRC-213ENST00000529828 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.35□□□□□ -2.03
PTPRC-213ENST00000529828 COLCA2A8K830 154 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 MRPS12O15235 138 aaKnown RBP2.35□□□□□ -2.03
PTPRC-213ENST00000529828 HYPMO75409 117 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 CFDP00746 253 aaPredicted RBP2.35□□□□□ -2.03
PTPRC-213ENST00000529828 NMBP08949 121 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 AKAIN1P0CW23 69 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 SRIP30626 198 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 LEPP41159 167 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 TAS2R30P59541 319 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 ERCC8Q13216 396 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 SPANXN5Q5MJ07 72 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 TMEM78Q5T7P6 136 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 TEPPQ6URK8 271 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 PATE2Q6UY27 113 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 SCXQ7RTU7 201 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 NEGR1Q7Z3B1 354 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 ZNF664Q8N3J9 261 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 NTN5Q8WTR8 489 aaPredicted RBP2.35□□□□□ -2.03
PTPRC-213ENST00000529828 TMEM126AQ9H061 195 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 ZNF331Q9NQX6 463 aaPredicted RBP2.35□□□□□ -2.03
PTPRC-213ENST00000529828 PRO0255Q9UI72 69 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 HHLA3Q9XRX5 114 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 BORCS7-ASMTA0A0B4J1R7 106 aa2.34□□□□□ -2.03
PTPRC-213ENST00000529828 LOC100131303A0A0U1RQF7 123 aa2.34□□□□□ -2.03
PTPRC-213ENST00000529828 C7orf66A4D0T2 115 aa2.34□□□□□ -2.03
PTPRC-213ENST00000529828 C7orf71A4D174 169 aa2.34□□□□□ -2.03
PTPRC-213ENST00000529828 MAP1LC3B2A6NCE7 125 aa2.34□□□□□ -2.03
PTPRC-213ENST00000529828 K7EQD1 137 aa2.34□□□□□ -2.03
PTPRC-213ENST00000529828 SPINK4O60575 86 aa2.34□□□□□ -2.03
PTPRC-213ENST00000529828 IGLV2-8P01709 118 aa2.34□□□□□ -2.03
PTPRC-213ENST00000529828 GYPEP15421 78 aa2.34□□□□□ -2.03
PTPRC-213ENST00000529828 RNASE4P34096 147 aaKnown RBP2.34□□□□□ -2.03
PTPRC-213ENST00000529828 TCL1AP56279 114 aa2.34□□□□□ -2.03
PTPRC-213ENST00000529828 KRTAP10-4P60372 401 aaPredicted RBP2.34□□□□□ -2.03
PTPRC-213ENST00000529828 SLC38A11Q08AI6 406 aa2.34□□□□□ -2.03
PTPRC-213ENST00000529828 FHL2Q14192 279 aa2.34□□□□□ -2.03
PTPRC-213ENST00000529828 IAH1Q2TAA2 248 aaPredicted RBP2.34□□□□□ -2.03
PTPRC-213ENST00000529828 MORN5Q5VZ52 161 aa2.34□□□□□ -2.03
PTPRC-213ENST00000529828 CD164L2Q6UWJ8 174 aa2.34□□□□□ -2.03
PTPRC-213ENST00000529828 LCN15Q6UWW0 184 aa2.34□□□□□ -2.03
PTPRC-213ENST00000529828 NRARPQ7Z6K4 114 aa2.34□□□□□ -2.03
PTPRC-213ENST00000529828 OR10G4Q8NGN3 311 aa2.34□□□□□ -2.03
PTPRC-213ENST00000529828 DNAJC30Q96LL9 226 aa2.34□□□□□ -2.03
PTPRC-213ENST00000529828 PYGO2Q9BRQ0 406 aa2.34□□□□□ -2.03
PTPRC-213ENST00000529828 MAP1LC3BQ9GZQ8 125 aa2.34□□□□□ -2.03
PTPRC-213ENST00000529828 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.04
PTPRC-213ENST00000529828 TRGV4A0A0C4DH28 118 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 ANKRD20A5PA0PJZ0 165 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 RNF222A6NCQ9 220 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 H3BQ15 152 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 M0R3E3 92 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 PITX3O75364 302 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 IGHV3-30P01768 117 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 IGHV3-33P01772 117 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 IGHV3-30-3P0DP02 117 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 IGHV3-30-5P0DP03 117 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 ESDP10768 282 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 HNRNPA3P51991 378 aaKnown RBP2.34□□□□□ -2.04
PTPRC-213ENST00000529828 IQCJQ1A5X6 159 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 PYDC2Q56P42 97 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 PRR9Q5T870 116 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 Q6ZSA8 131 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 LINC00305Q7Z4B0 112 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 TOMM5Q8N4H5 51 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 OR10G9Q8NGN4 311 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 OR10D4PQ8NGN7 298 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 LYPD6BQ8NI32 183 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 BAALCQ8WXS3 180 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 SEC11CQ9BY50 192 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 NAA50Q9GZZ1 169 aaKnown RBP2.34□□□□□ -2.04
PTPRC-213ENST00000529828 NAT8Q9UHE5 227 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 ERG28Q9UKR5 140 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 COX11Q9Y6N1 276 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 V9GYH0 126 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 MUC2Q02817 5179 aa2.34□□□□□ -2.04
PTPRC-213ENST00000529828 TRAV5A0A0B4J249 113 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 A0A1W2PRE2 83 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 USP17L23D6RBM5 183 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 J3QR89 54 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 LYRM1O43325 122 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 SYNGR2O43760 224 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 COX7A2P2O60397 106 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 OXTP01178 125 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 SLC25A6P12236 298 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 OPCMLQ14982 345 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 PMVKQ15126 192 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 C10orf126Q8N4M7 172 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 LINC00477Q96M19 166 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 VGLL1Q99990 258 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 SLC50A1Q9BRV3 221 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 FAT4Q6V0I7 4981 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 IGKV2-40A0A087WW87 121 aaPredicted RBP2.33□□□□□ -2.04
PTPRC-213ENST00000529828 A0A087WX48 190 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 IGHV3-16A0A0C4DH30 117 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 IGHV3-38A0A0C4DH36 116 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 TINCRA0A1B0GVN0 87 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 HMSDA8MTL9 139 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms