RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 SERF1AO75920 110 aa11.98□□□□□ -0.49
PACS1-209ENST00000529757 LINC00315P59091 139 aa11.98□□□□□ -0.49
PACS1-209ENST00000529757 HIST3H2BBQ8N257 126 aa11.98□□□□□ -0.49
PACS1-209ENST00000529757 POM121L12Q8N7R1 296 aa11.98□□□□□ -0.49
PACS1-209ENST00000529757 NDUFAF3Q9BU61 184 aa11.98□□□□□ -0.49
PACS1-209ENST00000529757 MRPL16Q9NX20 251 aaKnown RBP11.98□□□□□ -0.49
PACS1-209ENST00000529757 LAMTOR2Q9Y2Q5 125 aa11.98□□□□□ -0.49
PACS1-209ENST00000529757 TRAV26-2A0A0B4J265 109 aa11.97□□□□□ -0.49
PACS1-209ENST00000529757 A8MWV9 139 aa11.97□□□□□ -0.49
PACS1-209ENST00000529757 DAZ2Q13117 558 aaKnown RBP11.97□□□□□ -0.49
PACS1-209ENST00000529757 DEFB135Q30KP9 77 aa11.97□□□□□ -0.49
PACS1-209ENST00000529757 PDZD11Q5EBL8 140 aa11.97□□□□□ -0.49
PACS1-209ENST00000529757 FAM74A4Q5TZK3 123 aa11.97□□□□□ -0.49
PACS1-209ENST00000529757 SAMD10Q9BYL1 202 aa11.97□□□□□ -0.49
PACS1-209ENST00000529757 PLAC8L1A1L4L8 177 aa11.97□□□□□ -0.49
PACS1-209ENST00000529757 SMIM9A6NGZ8 99 aa11.97□□□□□ -0.49
PACS1-209ENST00000529757 NPYP01303 97 aa11.97□□□□□ -0.49
PACS1-209ENST00000529757 CRYGDP07320 174 aa11.97□□□□□ -0.49
PACS1-209ENST00000529757 LINC00310P59036 64 aa11.97□□□□□ -0.49
PACS1-209ENST00000529757 RASL10AQ92737 203 aa11.97□□□□□ -0.49
PACS1-209ENST00000529757 DNAH3Q8TD57 4116 aa11.96□□□□□ -0.49
PACS1-209ENST00000529757 TRGV1A0A0A0MS02 117 aa11.96□□□□□ -0.5
PACS1-209ENST00000529757 GAS8-AS1O95177 125 aa11.96□□□□□ -0.5
PACS1-209ENST00000529757 GATA1P15976 413 aaPredicted RBP11.96□□□□□ -0.5
PACS1-209ENST00000529757 X6R8D5 127 aa11.96□□□□□ -0.5
PACS1-209ENST00000529757 F5H697 171 aa11.95□□□□□ -0.5
PACS1-209ENST00000529757 NUPR1O60356 82 aa11.95□□□□□ -0.5
PACS1-209ENST00000529757 TNFRSF6BO95407 300 aa11.95□□□□□ -0.5
PACS1-209ENST00000529757 ESDP10768 282 aa11.95□□□□□ -0.5
PACS1-209ENST00000529757 S100A2P29034 98 aa11.95□□□□□ -0.5
PACS1-209ENST00000529757 LGALS9BQ3B8N2 356 aa11.95□□□□□ -0.5
PACS1-209ENST00000529757 Q6ZWC4 215 aa11.95□□□□□ -0.5
PACS1-209ENST00000529757 NOP10Q9NPE3 64 aaKnown RBP11.95□□□□□ -0.5
PACS1-209ENST00000529757 ZNF56Q15929 161 aa11.94□□□□□ -0.5
PACS1-209ENST00000529757 RNASEKQ6P5S7 137 aaKnown RBP11.94□□□□□ -0.5
PACS1-209ENST00000529757 NIT1Q86X76 327 aa11.94□□□□□ -0.5
PACS1-209ENST00000529757 NRACQ8N912 160 aa11.94□□□□□ -0.5
PACS1-209ENST00000529757 OVOL2Q9BRP0 275 aa11.94□□□□□ -0.5
PACS1-209ENST00000529757 CFAP126Q5VTH2 177 aa11.94□□□□□ -0.5
PACS1-209ENST00000529757 SUMO4Q6EEV6 95 aa11.94□□□□□ -0.5
PACS1-209ENST00000529757 Q6ZTI0 123 aa11.94□□□□□ -0.5
PACS1-209ENST00000529757 MAP1LC3AQ9H492 121 aa11.94□□□□□ -0.5
PACS1-209ENST00000529757 LOC389332A0A1B0GUA5 103 aa11.93□□□□□ -0.5
PACS1-209ENST00000529757 IFITM10A6NMD0 228 aa11.93□□□□□ -0.5
PACS1-209ENST00000529757 RHODO00212 210 aa11.93□□□□□ -0.5
PACS1-209ENST00000529757 RS1O15537 224 aa11.93□□□□□ -0.5
PACS1-209ENST00000529757 OR11H2Q8NH07 326 aa11.93□□□□□ -0.5
PACS1-209ENST00000529757 PRSS3P2Q8NHM4 247 aa11.93□□□□□ -0.5
PACS1-209ENST00000529757 RNF183Q96D59 192 aa11.93□□□□□ -0.5
PACS1-209ENST00000529757 URB1-AS1Q96HZ7 61 aa11.93□□□□□ -0.5
PACS1-209ENST00000529757 PPP1R17O96001 155 aa11.92□□□□□ -0.5
PACS1-209ENST00000529757 LINC00614P0C842 121 aa11.92□□□□□ -0.5
PACS1-209ENST00000529757 KPRPQ5T749 579 aaPredicted RBP11.92□□□□□ -0.5
PACS1-209ENST00000529757 UFSP1Q6NVU6 142 aa11.92□□□□□ -0.5
PACS1-209ENST00000529757 CHCHD1Q96BP2 118 aaKnown RBP11.92□□□□□ -0.5
PACS1-209ENST00000529757 HSBP1O75506 76 aa11.91□□□□□ -0.5
PACS1-209ENST00000529757 IFI27P40305 119 aaPredicted RBP11.91□□□□□ -0.5
PACS1-209ENST00000529757 EMP1P54849 157 aa11.91□□□□□ -0.5
PACS1-209ENST00000529757 FA2HQ7L5A8 372 aa11.91□□□□□ -0.5
PACS1-209ENST00000529757 HIST1H2BLQ99880 126 aa11.91□□□□□ -0.5
PACS1-209ENST00000529757 FABP4P15090 132 aa11.91□□□□□ -0.5
PACS1-209ENST00000529757 TMEM18Q96B42 140 aa11.91□□□□□ -0.5
PACS1-209ENST00000529757 RPL39LQ96EH5 51 aaKnown RBP11.91□□□□□ -0.5
PACS1-209ENST00000529757 IGHV3-73A0A0B4J1V6 119 aa11.9□□□□□ -0.5
PACS1-209ENST00000529757 ZFP2Q6ZN57 461 aa11.9□□□□□ -0.5
PACS1-209ENST00000529757 OR4C5Q8NGB2 326 aa11.9□□□□□ -0.5
PACS1-209ENST00000529757 C20orf78Q9BR46 151 aa11.9□□□□□ -0.5
PACS1-209ENST00000529757 TRAV4A0A0B4J268 109 aa11.89□□□□□ -0.51
PACS1-209ENST00000529757 GAGE12BA1L429 117 aa11.89□□□□□ -0.51
PACS1-209ENST00000529757 PRSS47A8MTI9 375 aa11.89□□□□□ -0.51
PACS1-209ENST00000529757 M0QY20 66 aa11.89□□□□□ -0.51
PACS1-209ENST00000529757 GAGE7O76087 117 aa11.89□□□□□ -0.51
PACS1-209ENST00000529757 GAGE12FP0CL80 117 aa11.89□□□□□ -0.51
PACS1-209ENST00000529757 GAGE12GP0CL81 117 aa11.89□□□□□ -0.51
PACS1-209ENST00000529757 GAGE12IP0CL82 117 aa11.89□□□□□ -0.51
PACS1-209ENST00000529757 MIFP14174 115 aa11.89□□□□□ -0.51
PACS1-209ENST00000529757 PMCHP20382 165 aa11.89□□□□□ -0.51
PACS1-209ENST00000529757 AKR1D1P51857 326 aa11.89□□□□□ -0.51
PACS1-209ENST00000529757 NXT2Q9NPJ8 142 aaKnown RBP11.89□□□□□ -0.51
PACS1-209ENST00000529757 AP5S1Q9NUS5 200 aa11.89□□□□□ -0.51
PACS1-209ENST00000529757 H7C1H1 209 aa11.88□□□□□ -0.51
PACS1-209ENST00000529757 AMTP48728 403 aa11.88□□□□□ -0.51
PACS1-209ENST00000529757 SUMO2P61956 95 aaKnown RBP11.88□□□□□ -0.51
PACS1-209ENST00000529757 EDA2RQ9HAV5 297 aa11.88□□□□□ -0.51
PACS1-209ENST00000529757 TP53TG1Q9Y2A0 90 aa11.88□□□□□ -0.51
PACS1-209ENST00000529757 TRGV2A0A075B6R0 118 aa11.87□□□□□ -0.51
PACS1-209ENST00000529757 IGHV4-28A0A0C4DH34 117 aa11.87□□□□□ -0.51
PACS1-209ENST00000529757 PRB2P02812 416 aaPredicted RBP11.87□□□□□ -0.51
PACS1-209ENST00000529757 FAM19A2Q8N3H0 131 aa11.87□□□□□ -0.51
PACS1-209ENST00000529757 Q8N8P6 123 aa11.87□□□□□ -0.51
PACS1-209ENST00000529757 NBEAL2Q6ZNJ1 2754 aa11.87□□□□□ -0.51
PACS1-209ENST00000529757 Q8NAQ8 132 aa11.87□□□□□ -0.51
PACS1-209ENST00000529757 ZNF479Q96JC4 524 aa11.87□□□□□ -0.51
PACS1-209ENST00000529757 PACRGQ96M98 296 aaPredicted RBP11.87□□□□□ -0.51
PACS1-209ENST00000529757 SMIM2Q9BVW6 85 aa11.87□□□□□ -0.51
PACS1-209ENST00000529757 ST20Q9HBF5 79 aa11.87□□□□□ -0.51
PACS1-209ENST00000529757 TRBV6-5A0A0K0K1A5 114 aa11.86□□□□□ -0.51
PACS1-209ENST00000529757 IGHV3-53P01767 116 aa11.86□□□□□ -0.51
PACS1-209ENST00000529757 NIT2Q9NQR4 276 aa11.86□□□□□ -0.51
PACS1-209ENST00000529757 NOTCH1P46531 2555 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms