RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 RPUSD4Q96CM3 377 aaKnown RBP2.93□□□□□ -1.94
CSDE1-212ENST00000529046 GNPNAT1Q96EK6 184 aaPredicted RBP2.93□□□□□ -1.94
CSDE1-212ENST00000529046 LINC00477Q96M19 166 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 LINC01587Q99440 93 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 ARV1Q9H2C2 271 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 PSENENQ9NZ42 101 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 PXMP4Q9Y6I8 212 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 MUC4Q99102 2169 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 TRAV12-2A0A075B6T6 113 aa2.92□□□□□ -1.94
CSDE1-212ENST00000529046 C7orf66A4D0T2 115 aa2.92□□□□□ -1.94
CSDE1-212ENST00000529046 M0QXV9 152 aa2.92□□□□□ -1.94
CSDE1-212ENST00000529046 AGPAT2O15120 278 aa2.92□□□□□ -1.94
CSDE1-212ENST00000529046 ZNF324O75467 553 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-212ENST00000529046 OXTP01178 125 aa2.92□□□□□ -1.94
CSDE1-212ENST00000529046 RLN2P04090 185 aa2.92□□□□□ -1.94
CSDE1-212ENST00000529046 SLC25A5P05141 298 aaKnown RBP2.92□□□□□ -1.94
CSDE1-212ENST00000529046 OR5G3P0C626 314 aa2.92□□□□□ -1.94
CSDE1-212ENST00000529046 PET100P0DJ07 73 aa2.92□□□□□ -1.94
CSDE1-212ENST00000529046 IGLC2P0DOY2 106 aa2.92□□□□□ -1.94
CSDE1-212ENST00000529046 RHOBP62745 196 aa2.92□□□□□ -1.94
CSDE1-212ENST00000529046 HIST1H1AQ02539 215 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-212ENST00000529046 RAB31Q13636 194 aa2.92□□□□□ -1.94
CSDE1-212ENST00000529046 PDE6HQ13956 83 aa2.92□□□□□ -1.94
CSDE1-212ENST00000529046 RGS21Q2M5E4 152 aa2.92□□□□□ -1.94
CSDE1-212ENST00000529046 IBA57Q5T440 356 aaKnown RBP2.92□□□□□ -1.94
CSDE1-212ENST00000529046 LINC00305Q7Z4B0 112 aa2.92□□□□□ -1.94
CSDE1-212ENST00000529046 C12orf45Q8N5I9 185 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-212ENST00000529046 RNF182Q8N6D2 247 aa2.92□□□□□ -1.94
CSDE1-212ENST00000529046 ZNF431Q8TF32 576 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-212ENST00000529046 FAM19A4Q96LR4 140 aa2.92□□□□□ -1.94
CSDE1-212ENST00000529046 ARL6Q9H0F7 186 aa2.92□□□□□ -1.94
CSDE1-212ENST00000529046 NOP10Q9NPE3 64 aaKnown RBP2.92□□□□□ -1.94
CSDE1-212ENST00000529046 PAIP2BQ9ULR5 123 aaKnown RBP2.92□□□□□ -1.94
CSDE1-212ENST00000529046 PRELID1Q9Y255 219 aa2.92□□□□□ -1.94
CSDE1-212ENST00000529046 MRPS16Q9Y3D3 137 aaKnown RBP2.92□□□□□ -1.94
CSDE1-212ENST00000529046 NACAE9PAV3 2078 aa2.92□□□□□ -1.94
CSDE1-212ENST00000529046 HSPG2P98160 4391 aa2.92□□□□□ -1.94
CSDE1-212ENST00000529046 A0A096LPF7 62 aa2.91□□□□□ -1.94
CSDE1-212ENST00000529046 H3BP45 60 aa2.91□□□□□ -1.94
CSDE1-212ENST00000529046 SSSCA1O60232 199 aa2.91□□□□□ -1.94
CSDE1-212ENST00000529046 PRM2P04554 102 aa2.91□□□□□ -1.94
CSDE1-212ENST00000529046 CRISP2P16562 243 aa2.91□□□□□ -1.94
CSDE1-212ENST00000529046 S100A11P31949 105 aa2.91□□□□□ -1.94
CSDE1-212ENST00000529046 IL15RAQ13261 267 aa2.91□□□□□ -1.94
CSDE1-212ENST00000529046 ESRGQ1W209 222 aa2.91□□□□□ -1.94
CSDE1-212ENST00000529046 IAH1Q2TAA2 248 aaPredicted RBP2.91□□□□□ -1.94
CSDE1-212ENST00000529046 C10orf113Q5VZT2 155 aa2.91□□□□□ -1.94
CSDE1-212ENST00000529046 Q6ZRN7 208 aaPredicted RBP2.91□□□□□ -1.94
CSDE1-212ENST00000529046 C11orf72Q8NBR9 251 aa2.91□□□□□ -1.94
CSDE1-212ENST00000529046 ZNF680Q8NEM1 530 aa2.91□□□□□ -1.94
CSDE1-212ENST00000529046 PFDN5Q99471 154 aa2.91□□□□□ -1.94
CSDE1-212ENST00000529046 MGST2Q99735 147 aa2.91□□□□□ -1.94
CSDE1-212ENST00000529046 C11orf1Q9H5F2 150 aa2.91□□□□□ -1.94
CSDE1-212ENST00000529046 TMEM14CQ9P0S9 112 aa2.91□□□□□ -1.94
CSDE1-212ENST00000529046 TRBV19A0A075B6N1 114 aa2.9□□□□□ -1.95
CSDE1-212ENST00000529046 RBAKDNA6NC62 111 aa2.9□□□□□ -1.95
CSDE1-212ENST00000529046 H3BQ15 152 aa2.9□□□□□ -1.95
CSDE1-212ENST00000529046 COX7A2P2O60397 106 aa2.9□□□□□ -1.95
CSDE1-212ENST00000529046 SPINK4O60575 86 aa2.9□□□□□ -1.95
CSDE1-212ENST00000529046 GCGP01275 180 aa2.9□□□□□ -1.95
CSDE1-212ENST00000529046 METTL15P1P0C7V9 234 aa2.9□□□□□ -1.95
CSDE1-212ENST00000529046 CHTF8P0CG12 524 aa2.9□□□□□ -1.95
CSDE1-212ENST00000529046 HIST1H1EP10412 219 aaKnown RBP2.9□□□□□ -1.95
CSDE1-212ENST00000529046 RAB4AP20338 218 aa2.9□□□□□ -1.95
CSDE1-212ENST00000529046 BTCP35070 178 aa2.9□□□□□ -1.95
CSDE1-212ENST00000529046 TCL1AP56279 114 aa2.9□□□□□ -1.95
CSDE1-212ENST00000529046 RRAS2P62070 204 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-212ENST00000529046 SLC38A11Q08AI6 406 aa2.9□□□□□ -1.95
CSDE1-212ENST00000529046 ZNF726P1Q15940 193 aa2.9□□□□□ -1.95
CSDE1-212ENST00000529046 SAPCD1Q5SSQ6 148 aa2.9□□□□□ -1.95
CSDE1-212ENST00000529046 LINC00299Q6ZSB3 139 aa2.9□□□□□ -1.95
CSDE1-212ENST00000529046 SPATA12Q7Z6I5 190 aa2.9□□□□□ -1.95
CSDE1-212ENST00000529046 LYPD1Q8N2G4 141 aa2.9□□□□□ -1.95
CSDE1-212ENST00000529046 Q8N9L7 120 aa2.9□□□□□ -1.95
CSDE1-212ENST00000529046 SDHCQ99643 169 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-212ENST00000529046 PARD6GQ9BYG4 376 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-212ENST00000529046 PRO0255Q9UI72 69 aa2.9□□□□□ -1.95
CSDE1-212ENST00000529046 LRP1BQ9NZR2 4599 aa2.89□□□□□ -1.95
CSDE1-212ENST00000529046 C7orf71A4D174 169 aa2.89□□□□□ -1.95
CSDE1-212ENST00000529046 SLC17A3O00476 420 aa2.89□□□□□ -1.95
CSDE1-212ENST00000529046 GATCO43716 136 aaKnown RBP2.89□□□□□ -1.95
CSDE1-212ENST00000529046 CCNKO75909 580 aa2.89□□□□□ -1.95
CSDE1-212ENST00000529046 HTN1P15515 57 aa2.89□□□□□ -1.95
CSDE1-212ENST00000529046 RAB5AP20339 215 aa2.89□□□□□ -1.95
CSDE1-212ENST00000529046 PVALBP20472 110 aaPredicted RBP2.89□□□□□ -1.95
CSDE1-212ENST00000529046 INPP1P49441 399 aa2.89□□□□□ -1.95
CSDE1-212ENST00000529046 SULT1A1P50225 295 aa2.89□□□□□ -1.95
CSDE1-212ENST00000529046 HBG1P69891 147 aa2.89□□□□□ -1.95
CSDE1-212ENST00000529046 HBG2P69892 147 aa2.89□□□□□ -1.95
CSDE1-212ENST00000529046 ZNF846Q147U1 533 aa2.89□□□□□ -1.95
CSDE1-212ENST00000529046 TRIQKQ629K1 86 aa2.89□□□□□ -1.95
CSDE1-212ENST00000529046 CBLN2Q8IUK8 224 aa2.89□□□□□ -1.95
CSDE1-212ENST00000529046 EIF4E3Q8N5X7 224 aaKnown RBP2.89□□□□□ -1.95
CSDE1-212ENST00000529046 C2orf50Q96LR7 162 aa2.89□□□□□ -1.95
CSDE1-212ENST00000529046 MRPL32Q9BYC8 188 aaKnown RBP2.89□□□□□ -1.95
CSDE1-212ENST00000529046 LYRM2Q9NU23 88 aaPredicted RBP2.89□□□□□ -1.95
CSDE1-212ENST00000529046 SLC39A9Q9NUM3 307 aa2.89□□□□□ -1.95
CSDE1-212ENST00000529046 UQCC1Q9NVA1 299 aa2.89□□□□□ -1.95
CSDE1-212ENST00000529046 ZNF586Q9NXT0 402 aa2.89□□□□□ -1.95
CSDE1-212ENST00000529046 KLF12Q9Y4X4 402 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms