RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 FAT1Q14517 4588 aa10.41□□□□□ -0.74
CTSB-215ENST00000528965 VPS13BQ7Z7G8 4022 aa10.4□□□□□ -0.74
CTSB-215ENST00000528965 GAGE12JA6NER3 117 aa10.4□□□□□ -0.74
CTSB-215ENST00000528965 B4DEV8 164 aa10.4□□□□□ -0.74
CTSB-215ENST00000528965 RHODO00212 210 aa10.4□□□□□ -0.74
CTSB-215ENST00000528965 S100A9P06702 114 aaKnown RBP10.4□□□□□ -0.74
CTSB-215ENST00000528965 GAGE1Q13065 139 aa10.4□□□□□ -0.74
CTSB-215ENST00000528965 GAGE4Q13068 117 aa10.4□□□□□ -0.74
CTSB-215ENST00000528965 GAGE5Q13069 117 aa10.4□□□□□ -0.74
CTSB-215ENST00000528965 GAGE13Q4V321 117 aa10.4□□□□□ -0.74
CTSB-215ENST00000528965 Q86TA4 180 aa10.4□□□□□ -0.74
CTSB-215ENST00000528965 SYT8Q8NBV8 401 aa10.4□□□□□ -0.74
CTSB-215ENST00000528965 RMI2Q96E14 147 aa10.4□□□□□ -0.74
CTSB-215ENST00000528965 URGCP-MRPS24S4R325 110 aa10.4□□□□□ -0.74
CTSB-215ENST00000528965 PLA2G1BP04054 148 aaKnown RBP10.39□□□□□ -0.75
CTSB-215ENST00000528965 LINC00694P0DN24 101 aa10.39□□□□□ -0.75
CTSB-215ENST00000528965 RAB5CP51148 216 aa10.39□□□□□ -0.75
CTSB-215ENST00000528965 FAM162BQ5T6X4 162 aa10.39□□□□□ -0.75
CTSB-215ENST00000528965 AKAP14Q86UN6 197 aa10.39□□□□□ -0.75
CTSB-215ENST00000528965 TCTE3Q8IZS6 198 aa10.39□□□□□ -0.75
CTSB-215ENST00000528965 J3QL48 77 aa10.38□□□□□ -0.75
CTSB-215ENST00000528965 M0R036 132 aa10.38□□□□□ -0.75
CTSB-215ENST00000528965 Q6ZNX1 250 aa10.38□□□□□ -0.75
CTSB-215ENST00000528965 IL36BQ9NZH7 164 aa10.38□□□□□ -0.75
CTSB-215ENST00000528965 GNG13Q9P2W3 67 aa10.37□□□□□ -0.75
CTSB-215ENST00000528965 SRRM2Q9UQ35 2752 aaKnown RBP10.37□□□□□ -0.75
CTSB-215ENST00000528965 MYCBP2O75592 4640 aa10.36□□□□□ -0.75
CTSB-215ENST00000528965 TMSB15BA0A087X1C1 80 aa10.36□□□□□ -0.75
CTSB-215ENST00000528965 IGKV3D-20A0A0C4DH25 116 aa10.36□□□□□ -0.75
CTSB-215ENST00000528965 H3BVH4 76 aa10.36□□□□□ -0.75
CTSB-215ENST00000528965 SH2D1AO60880 128 aa10.36□□□□□ -0.75
CTSB-215ENST00000528965 IFNA1P01562 189 aa10.36□□□□□ -0.75
CTSB-215ENST00000528965 DAZ4Q86SG3 579 aaKnown RBP10.36□□□□□ -0.75
CTSB-215ENST00000528965 SLC51BQ86UW2 128 aa10.36□□□□□ -0.75
CTSB-215ENST00000528965 ZC2HC1AQ96GY0 325 aa10.36□□□□□ -0.75
CTSB-215ENST00000528965 MANBALQ9NQG1 85 aa10.36□□□□□ -0.75
CTSB-215ENST00000528965 DAZ3Q9NR90 486 aaKnown RBP10.36□□□□□ -0.75
CTSB-215ENST00000528965 FAM30AQ9NZY2 134 aa10.36□□□□□ -0.75
CTSB-215ENST00000528965 TRBV6-1A0A0K0K1D8 114 aa10.35□□□□□ -0.75
CTSB-215ENST00000528965 GRIFINA4D1Z8 144 aa10.35□□□□□ -0.75
CTSB-215ENST00000528965 WFDC2Q14508 124 aa10.35□□□□□ -0.75
CTSB-215ENST00000528965 KCNIP4Q6PIL6 250 aa10.35□□□□□ -0.75
CTSB-215ENST00000528965 Q6ZSA8 131 aa10.35□□□□□ -0.75
CTSB-215ENST00000528965 BAGE2Q86Y30 109 aa10.35□□□□□ -0.75
CTSB-215ENST00000528965 Q8N3U1 123 aa10.35□□□□□ -0.75
CTSB-215ENST00000528965 PHLDA3Q9Y5J5 127 aa10.35□□□□□ -0.75
CTSB-215ENST00000528965 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.34□□□□□ -0.75
CTSB-215ENST00000528965 SCO2A0A1W2PP80 73 aa10.34□□□□□ -0.75
CTSB-215ENST00000528965 LECT2O14960 151 aa10.34□□□□□ -0.75
CTSB-215ENST00000528965 LTAP01374 205 aa10.34□□□□□ -0.75
CTSB-215ENST00000528965 FAM74A4Q5TZK3 123 aa10.34□□□□□ -0.75
CTSB-215ENST00000528965 UFSP1Q6NVU6 142 aa10.34□□□□□ -0.75
CTSB-215ENST00000528965 LINC00528Q8N1L1 170 aa10.34□□□□□ -0.75
CTSB-215ENST00000528965 CHCHD7Q9BUK0 85 aa10.34□□□□□ -0.75
CTSB-215ENST00000528965 KRBOX1C9JBD0 128 aa10.33□□□□□ -0.76
CTSB-215ENST00000528965 ARMS2P0C7Q2 107 aa10.33□□□□□ -0.76
CTSB-215ENST00000528965 ELOBQ15370 118 aa10.33□□□□□ -0.76
CTSB-215ENST00000528965 DNLZQ5SXM8 178 aa10.33□□□□□ -0.76
CTSB-215ENST00000528965 PRR27Q6MZM9 219 aa10.33□□□□□ -0.76
CTSB-215ENST00000528965 C14orf178Q8N769 122 aaPredicted RBP10.33□□□□□ -0.76
CTSB-215ENST00000528965 Q8N976 141 aa10.33□□□□□ -0.76
CTSB-215ENST00000528965 DAZAP1Q96EP5 407 aaKnown RBP10.33□□□□□ -0.76
CTSB-215ENST00000528965 SAMD10Q9BYL1 202 aa10.33□□□□□ -0.76
CTSB-215ENST00000528965 IGKV2D-24A0A075B6R9 120 aa10.32□□□□□ -0.76
CTSB-215ENST00000528965 A0A087WX48 190 aa10.32□□□□□ -0.76
CTSB-215ENST00000528965 SULT1A2P50226 295 aa10.32□□□□□ -0.76
CTSB-215ENST00000528965 CRIP1P50238 77 aa10.32□□□□□ -0.76
CTSB-215ENST00000528965 ZNF674Q2M3X9 581 aa10.32□□□□□ -0.76
CTSB-215ENST00000528965 DMRTA1Q5VZB9 504 aa10.32□□□□□ -0.76
CTSB-215ENST00000528965 NIT1Q86X76 327 aa10.32□□□□□ -0.76
CTSB-215ENST00000528965 BAALCQ8WXS3 180 aa10.32□□□□□ -0.76
CTSB-215ENST00000528965 JPT2Q9H910 190 aa10.32□□□□□ -0.76
CTSB-215ENST00000528965 TRBV10-1A0A0K0K1A3 114 aa10.31□□□□□ -0.76
CTSB-215ENST00000528965 RBFOX3A6NFN3 312 aa10.31□□□□□ -0.76
CTSB-215ENST00000528965 CCL20P78556 96 aa10.31□□□□□ -0.76
CTSB-215ENST00000528965 COX8CQ7Z4L0 72 aa10.31□□□□□ -0.76
CTSB-215ENST00000528965 ZFP82Q8N141 532 aa10.31□□□□□ -0.76
CTSB-215ENST00000528965 DEFB104AQ8WTQ1 72 aa10.31□□□□□ -0.76
CTSB-215ENST00000528965 TRAV1-1A0A0B4J248 108 aa10.3□□□□□ -0.76
CTSB-215ENST00000528965 M0R381 172 aa10.3□□□□□ -0.76
CTSB-215ENST00000528965 RPL36AP83881 106 aaKnown RBP10.3□□□□□ -0.76
CTSB-215ENST00000528965 LINC01559Q495D7 138 aa10.3□□□□□ -0.76
CTSB-215ENST00000528965 RPL36ALQ969Q0 106 aaKnown RBP10.3□□□□□ -0.76
CTSB-215ENST00000528965 SFRP2Q96HF1 295 aa10.3□□□□□ -0.76
CTSB-215ENST00000528965 KLK12Q9UKR0 248 aa10.3□□□□□ -0.76
CTSB-215ENST00000528965 A0A087WWL8 130 aa10.29□□□□□ -0.76
CTSB-215ENST00000528965 RPL35P42766 123 aaKnown RBP10.29□□□□□ -0.76
CTSB-215ENST00000528965 Q0VG73 95 aa10.29□□□□□ -0.76
CTSB-215ENST00000528965 UBE2WQ96B02 151 aa10.29□□□□□ -0.76
CTSB-215ENST00000528965 MED9Q9NWA0 146 aa10.29□□□□□ -0.76
CTSB-215ENST00000528965 PDE6DO43924 150 aa10.28□□□□□ -0.76
CTSB-215ENST00000528965 C14orf177Q52M58 125 aa10.28□□□□□ -0.76
CTSB-215ENST00000528965 SCXQ7RTU7 201 aa10.28□□□□□ -0.76
CTSB-215ENST00000528965 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.28□□□□□ -0.76
CTSB-215ENST00000528965 Q9UF83 564 aa10.28□□□□□ -0.76
CTSB-215ENST00000528965 KRTAP29-1A8MX34 341 aaPredicted RBP10.27□□□□□ -0.77
CTSB-215ENST00000528965 CRPP02741 224 aa10.27□□□□□ -0.77
CTSB-215ENST00000528965 GNG4P50150 75 aa10.27□□□□□ -0.77
CTSB-215ENST00000528965 SSTP61278 116 aa10.27□□□□□ -0.77
CTSB-215ENST00000528965 BLOC1S1P78537 153 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms