RNA–Protein interactions for RNA: ENST00000528870.5

TRIM29-210, Transcript of tripartite motif containing 29, humanhuman

TSL 2 BASIC

Gene TRIM29, Length 2,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-210ENST00000528870 SPG11Q96JI7 2443 aa11.37□□□□□ -0.59
TRIM29-210ENST00000528870 TRAV12-2A0A075B6T6 113 aa11.37□□□□□ -0.59
TRIM29-210ENST00000528870 SDHAF1A6NFY7 115 aa11.37□□□□□ -0.59
TRIM29-210ENST00000528870 IGIPA6NJ69 53 aa11.37□□□□□ -0.59
TRIM29-210ENST00000528870 CD300EQ496F6 205 aaPredicted RBP11.37□□□□□ -0.59
TRIM29-210ENST00000528870 PAPPA-AS1Q5QFB9 102 aa11.37□□□□□ -0.59
TRIM29-210ENST00000528870 ODF3Q96PU9 254 aa11.37□□□□□ -0.59
TRIM29-210ENST00000528870 PKD1L2Q7Z442 2459 aa11.37□□□□□ -0.59
TRIM29-210ENST00000528870 AGRNO00468 2067 aa11.37□□□□□ -0.59
TRIM29-210ENST00000528870 IGHV3-16A0A0C4DH30 117 aa11.36□□□□□ -0.59
TRIM29-210ENST00000528870 A0A0J9YX75 114 aa11.36□□□□□ -0.59
TRIM29-210ENST00000528870 RPL39P62891 51 aaKnown RBP11.36□□□□□ -0.59
TRIM29-210ENST00000528870 PMVKQ15126 192 aa11.36□□□□□ -0.59
TRIM29-210ENST00000528870 RRN3P1Q2M238 152 aa11.36□□□□□ -0.59
TRIM29-210ENST00000528870 SYT8Q8NBV8 401 aa11.36□□□□□ -0.59
TRIM29-210ENST00000528870 TMEM141Q96I45 108 aa11.36□□□□□ -0.59
TRIM29-210ENST00000528870 IGLV4-69A0A075B6H9 119 aa11.36□□□□□ -0.59
TRIM29-210ENST00000528870 A0A1B0GWB2 263 aa11.36□□□□□ -0.59
TRIM29-210ENST00000528870 C11orf86A6NJI1 115 aa11.36□□□□□ -0.59
TRIM29-210ENST00000528870 EMP1P54849 157 aa11.36□□□□□ -0.59
TRIM29-210ENST00000528870 HERVK_113P61574 105 aa11.36□□□□□ -0.59
TRIM29-210ENST00000528870 C9orf85Q96MD7 179 aa11.36□□□□□ -0.59
TRIM29-210ENST00000528870 MDFICQ9P1T7 246 aa11.36□□□□□ -0.59
TRIM29-210ENST00000528870 FLNCQ14315 2725 aa11.35□□□□□ -0.59
TRIM29-210ENST00000528870 TEX48A0A1B0GUV7 120 aa11.35□□□□□ -0.59
TRIM29-210ENST00000528870 LGALS9O00182 355 aa11.35□□□□□ -0.59
TRIM29-210ENST00000528870 DSCR9P59020 149 aa11.35□□□□□ -0.59
TRIM29-210ENST00000528870 CRYBG3Q68DQ2 2970 aa11.35□□□□□ -0.59
TRIM29-210ENST00000528870 TMEM89A2RUT3 159 aa11.35□□□□□ -0.59
TRIM29-210ENST00000528870 F8W1H4 67 aa11.35□□□□□ -0.59
TRIM29-210ENST00000528870 HOXA3O43365 443 aaPredicted RBP11.35□□□□□ -0.59
TRIM29-210ENST00000528870 SCGB1A1P11684 91 aa11.35□□□□□ -0.59
TRIM29-210ENST00000528870 COX6B1P14854 86 aa11.35□□□□□ -0.59
TRIM29-210ENST00000528870 ZNF56Q15929 161 aa11.35□□□□□ -0.59
TRIM29-210ENST00000528870 NRGNQ92686 78 aa11.35□□□□□ -0.59
TRIM29-210ENST00000528870 PLEKHB2Q96CS7 222 aa11.35□□□□□ -0.59
TRIM29-210ENST00000528870 TIMM17AQ99595 171 aa11.35□□□□□ -0.59
TRIM29-210ENST00000528870 TRBV27A0A0K0K1C4 114 aa11.34□□□□□ -0.59
TRIM29-210ENST00000528870 H3BMG7 143 aa11.34□□□□□ -0.59
TRIM29-210ENST00000528870 K7EQG2 157 aa11.34□□□□□ -0.59
TRIM29-210ENST00000528870 SRSF9Q13242 221 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRIM29-210ENST00000528870 Q8N1Y9 231 aa11.34□□□□□ -0.59
TRIM29-210ENST00000528870 KLHL30-AS1Q8NEE0 82 aa11.34□□□□□ -0.59
TRIM29-210ENST00000528870 ZNF256Q9Y2P7 627 aaPredicted RBP11.34□□□□□ -0.59
TRIM29-210ENST00000528870 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRIM29-210ENST00000528870 TRBV6-5A0A0K0K1A5 114 aa11.33□□□□□ -0.59
TRIM29-210ENST00000528870 A6NJY4 79 aa11.33□□□□□ -0.59
TRIM29-210ENST00000528870 SPINK13Q1W4C9 94 aa11.33□□□□□ -0.59
TRIM29-210ENST00000528870 LINC01356Q8N9X3 169 aa11.33□□□□□ -0.59
TRIM29-210ENST00000528870 IGHV1OR15-1A0A075B7D0 117 aa11.33□□□□□ -0.6
TRIM29-210ENST00000528870 SYNJ2BPP57105 145 aa11.33□□□□□ -0.6
TRIM29-210ENST00000528870 AMTNQ6UX39 209 aa11.32□□□□□ -0.6
TRIM29-210ENST00000528870 UTP20O75691 2785 aaKnown RBP11.32□□□□□ -0.6
TRIM29-210ENST00000528870 DOPEY1Q5JWR5 2465 aa11.32□□□□□ -0.6
TRIM29-210ENST00000528870 WFDC2Q14508 124 aa11.32□□□□□ -0.6
TRIM29-210ENST00000528870 MRPL16Q9NX20 251 aaKnown RBP11.32□□□□□ -0.6
TRIM29-210ENST00000528870 M0QY20 66 aa11.31□□□□□ -0.6
TRIM29-210ENST00000528870 TMEM170BQ5T4T1 132 aa11.31□□□□□ -0.6
TRIM29-210ENST00000528870 SPANXB1Q9NS25 103 aaPredicted RBP11.31□□□□□ -0.6
TRIM29-210ENST00000528870 PGPEP1Q9NXJ5 209 aa11.31□□□□□ -0.6
TRIM29-210ENST00000528870 MORN3Q6PF18 240 aaPredicted RBP11.31□□□□□ -0.6
TRIM29-210ENST00000528870 TRPT1Q86TN4 253 aaKnown RBP11.31□□□□□ -0.6
TRIM29-210ENST00000528870 DUX5Q96PT3 197 aa11.31□□□□□ -0.6
TRIM29-210ENST00000528870 ZNF876PQ49A33 203 aa11.3□□□□□ -0.6
TRIM29-210ENST00000528870 GAGE13Q4V321 117 aa11.3□□□□□ -0.6
TRIM29-210ENST00000528870 CSPG4Q6UVK1 2322 aa11.3□□□□□ -0.6
TRIM29-210ENST00000528870 TGFAP01135 160 aa11.29□□□□□ -0.6
TRIM29-210ENST00000528870 ZNRF2Q8NHG8 242 aa11.29□□□□□ -0.6
TRIM29-210ENST00000528870 SIGMAR1Q99720 223 aa11.29□□□□□ -0.6
TRIM29-210ENST00000528870 USP9XQ93008 2570 aaPredicted RBP11.29□□□□□ -0.6
TRIM29-210ENST00000528870 J3QR89 54 aa11.29□□□□□ -0.6
TRIM29-210ENST00000528870 RHOHQ15669 191 aa11.29□□□□□ -0.6
TRIM29-210ENST00000528870 NSUN5P1Q3KNT7 163 aa11.29□□□□□ -0.6
TRIM29-210ENST00000528870 A0A0J9YY99 117 aa11.28□□□□□ -0.6
TRIM29-210ENST00000528870 J3QLI3 93 aa11.28□□□□□ -0.6
TRIM29-210ENST00000528870 HOXD3P31249 432 aaPredicted RBP11.28□□□□□ -0.6
TRIM29-210ENST00000528870 VPREB3Q9UKI3 123 aa11.28□□□□□ -0.6
TRIM29-210ENST00000528870 AZU1P20160 251 aa11.28□□□□□ -0.6
TRIM29-210ENST00000528870 UBE2D1P51668 147 aa11.28□□□□□ -0.6
TRIM29-210ENST00000528870 MAPK1IP1LQ8NDC0 245 aa11.28□□□□□ -0.6
TRIM29-210ENST00000528870 IGSF10Q6WRI0 2623 aa11.27□□□□□ -0.6
TRIM29-210ENST00000528870 TRGV11A0A075B6L2 103 aa11.27□□□□□ -0.61
TRIM29-210ENST00000528870 ELANEP08246 267 aa11.27□□□□□ -0.61
TRIM29-210ENST00000528870 TSPEAR-AS2P59090 65 aa11.27□□□□□ -0.61
TRIM29-210ENST00000528870 MTURNQ8N3F0 131 aa11.27□□□□□ -0.61
TRIM29-210ENST00000528870 SPATA25Q9BR10 227 aa11.27□□□□□ -0.61
TRIM29-210ENST00000528870 GAGE12HA6NDE8 117 aa11.27□□□□□ -0.61
TRIM29-210ENST00000528870 ETDBQ3ZM63 59 aa11.27□□□□□ -0.61
TRIM29-210ENST00000528870 I3L3M4 83 aa11.26□□□□□ -0.61
TRIM29-210ENST00000528870 SH2D6Q7Z4S9 175 aa11.26□□□□□ -0.61
TRIM29-210ENST00000528870 UBE2E2Q96LR5 201 aa11.26□□□□□ -0.61
TRIM29-210ENST00000528870 OPRPNQ99935 248 aaPredicted RBP11.26□□□□□ -0.61
TRIM29-210ENST00000528870 PRO0461Q9UI25 63 aa11.26□□□□□ -0.61
TRIM29-210ENST00000528870 CSMD2Q7Z408 3487 aa11.25□□□□□ -0.61
TRIM29-210ENST00000528870 J3QQQ9 107 aa11.25□□□□□ -0.61
TRIM29-210ENST00000528870 APOMO95445 188 aa11.25□□□□□ -0.61
TRIM29-210ENST00000528870 LGALS3P17931 250 aaKnown RBP11.25□□□□□ -0.61
TRIM29-210ENST00000528870 TSPAN13O95857 204 aa11.25□□□□□ -0.61
TRIM29-210ENST00000528870 P0DMU3 169 aa11.25□□□□□ -0.61
TRIM29-210ENST00000528870 FAM231AP0DMU4 169 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms