RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 TRAV12-3A0A0B4J271 114 aa8.7□□□□□ -1.02
LINC01001-201ENST00000526704 IGIPA6NJ69 53 aa8.7□□□□□ -1.02
LINC01001-201ENST00000526704 ZNF815PA8K554 130 aa8.7□□□□□ -1.02
LINC01001-201ENST00000526704 AVPP01185 164 aa8.7□□□□□ -1.02
LINC01001-201ENST00000526704 ID1P41134 155 aa8.7□□□□□ -1.02
LINC01001-201ENST00000526704 DEFB104AQ8WTQ1 72 aa8.7□□□□□ -1.02
LINC01001-201ENST00000526704 C11orf86A6NJI1 115 aa8.69□□□□□ -1.02
LINC01001-201ENST00000526704 CD7P09564 240 aa8.69□□□□□ -1.02
LINC01001-201ENST00000526704 ATP5J2P56134 94 aa8.69□□□□□ -1.02
LINC01001-201ENST00000526704 MORN3Q6PF18 240 aaPredicted RBP8.69□□□□□ -1.02
LINC01001-201ENST00000526704 SPG11Q96JI7 2443 aa8.69□□□□□ -1.02
LINC01001-201ENST00000526704 H3BMG7 143 aa8.69□□□□□ -1.02
LINC01001-201ENST00000526704 RPL39P62891 51 aaKnown RBP8.69□□□□□ -1.02
LINC01001-201ENST00000526704 CSPG4Q6UVK1 2322 aa8.69□□□□□ -1.02
LINC01001-201ENST00000526704 PSMB8P28062 276 aa8.68□□□□□ -1.02
LINC01001-201ENST00000526704 WFDC2Q14508 124 aa8.68□□□□□ -1.02
LINC01001-201ENST00000526704 AMTNQ6UX39 209 aa8.68□□□□□ -1.02
LINC01001-201ENST00000526704 CFAP46Q8IYW2 2715 aa8.68□□□□□ -1.02
LINC01001-201ENST00000526704 LGALS9O00182 355 aa8.68□□□□□ -1.02
LINC01001-201ENST00000526704 EMP1P54849 157 aa8.68□□□□□ -1.02
LINC01001-201ENST00000526704 C10orf99Q6UWK7 81 aa8.68□□□□□ -1.02
LINC01001-201ENST00000526704 C9orf85Q96MD7 179 aa8.68□□□□□ -1.02
LINC01001-201ENST00000526704 SPAG8Q99932 426 aaPredicted RBP8.68□□□□□ -1.02
LINC01001-201ENST00000526704 ZNF580Q9UK33 172 aa8.68□□□□□ -1.02
LINC01001-201ENST00000526704 PKD1L2Q7Z442 2459 aa8.68□□□□□ -1.02
LINC01001-201ENST00000526704 TRAV26-1A0A087WT03 109 aa8.67□□□□□ -1.02
LINC01001-201ENST00000526704 IGHV3-16A0A0C4DH30 117 aa8.67□□□□□ -1.02
LINC01001-201ENST00000526704 SDHAF1A6NFY7 115 aa8.67□□□□□ -1.02
LINC01001-201ENST00000526704 KLHL30-AS1Q8NEE0 82 aa8.67□□□□□ -1.02
LINC01001-201ENST00000526704 F5H697 171 aa8.67□□□□□ -1.02
LINC01001-201ENST00000526704 VCYO14598 125 aa8.67□□□□□ -1.02
LINC01001-201ENST00000526704 ZNF688P0C7X2 276 aa8.67□□□□□ -1.02
LINC01001-201ENST00000526704 PMVKQ15126 192 aa8.67□□□□□ -1.02
LINC01001-201ENST00000526704 ODF3Q96PU9 254 aa8.67□□□□□ -1.02
LINC01001-201ENST00000526704 PRO0461Q9UI25 63 aa8.67□□□□□ -1.02
LINC01001-201ENST00000526704 FLNCQ14315 2725 aa8.67□□□□□ -1.02
LINC01001-201ENST00000526704 HOXA3O43365 443 aaPredicted RBP8.67□□□□□ -1.02
LINC01001-201ENST00000526704 CRYBA4P53673 196 aa8.67□□□□□ -1.02
LINC01001-201ENST00000526704 SCGB1D4Q6XE38 83 aa8.67□□□□□ -1.02
LINC01001-201ENST00000526704 MTURNQ8N3F0 131 aa8.67□□□□□ -1.02
LINC01001-201ENST00000526704 TMEM141Q96I45 108 aa8.67□□□□□ -1.02
LINC01001-201ENST00000526704 TIMM17AQ99595 171 aa8.67□□□□□ -1.02
LINC01001-201ENST00000526704 KIR2DL4Q99706 377 aa8.67□□□□□ -1.02
LINC01001-201ENST00000526704 TRAV12-2A0A075B6T6 113 aa8.66□□□□□ -1.02
LINC01001-201ENST00000526704 A0A0J9YX75 114 aa8.66□□□□□ -1.02
LINC01001-201ENST00000526704 TRBV6-5A0A0K0K1A5 114 aa8.66□□□□□ -1.02
LINC01001-201ENST00000526704 TRBV27A0A0K0K1C4 114 aa8.66□□□□□ -1.02
LINC01001-201ENST00000526704 LINC01549A6NIU2 74 aa8.66□□□□□ -1.02
LINC01001-201ENST00000526704 TSPEAR-AS2P59090 65 aa8.66□□□□□ -1.02
LINC01001-201ENST00000526704 FAM74A4Q5TZK3 123 aa8.66□□□□□ -1.02
LINC01001-201ENST00000526704 PGPEP1Q9NXJ5 209 aa8.66□□□□□ -1.02
LINC01001-201ENST00000526704 MDFICQ9P1T7 246 aa8.66□□□□□ -1.02
LINC01001-201ENST00000526704 IGHV4-59P01825 116 aa8.66□□□□□ -1.02
LINC01001-201ENST00000526704 UBE2D1P51668 147 aa8.66□□□□□ -1.02
LINC01001-201ENST00000526704 PAPPA-AS1Q5QFB9 102 aa8.66□□□□□ -1.02
LINC01001-201ENST00000526704 IGKV3-20P01619 116 aa8.65□□□□□ -1.02
LINC01001-201ENST00000526704 ETDBQ3ZM63 59 aa8.65□□□□□ -1.02
LINC01001-201ENST00000526704 GAGE13Q4V321 117 aa8.65□□□□□ -1.02
LINC01001-201ENST00000526704 SH2D6Q7Z4S9 175 aa8.65□□□□□ -1.02
LINC01001-201ENST00000526704 ZNRF2Q8NHG8 242 aa8.65□□□□□ -1.02
LINC01001-201ENST00000526704 DOPEY2Q9Y3R5 2298 aa8.65□□□□□ -1.03
LINC01001-201ENST00000526704 A6NJY4 79 aa8.65□□□□□ -1.03
LINC01001-201ENST00000526704 B4DSR2 109 aa8.65□□□□□ -1.03
LINC01001-201ENST00000526704 HERVK_113P61574 105 aa8.65□□□□□ -1.03
LINC01001-201ENST00000526704 Q8N1Y9 231 aa8.65□□□□□ -1.03
LINC01001-201ENST00000526704 DOPEY1Q5JWR5 2465 aa8.64□□□□□ -1.03
LINC01001-201ENST00000526704 UTP20O75691 2785 aaKnown RBP8.64□□□□□ -1.03
LINC01001-201ENST00000526704 A0A0J9YY99 117 aa8.64□□□□□ -1.03
LINC01001-201ENST00000526704 K7EQG2 157 aa8.64□□□□□ -1.03
LINC01001-201ENST00000526704 M0QY20 66 aa8.64□□□□□ -1.03
LINC01001-201ENST00000526704 ZNF56Q15929 161 aa8.64□□□□□ -1.03
LINC01001-201ENST00000526704 DEFB112Q30KQ8 113 aa8.64□□□□□ -1.03
LINC01001-201ENST00000526704 ZNF876PQ49A33 203 aa8.64□□□□□ -1.03
LINC01001-201ENST00000526704 GEMIN7Q9H840 131 aaKnown RBP8.64□□□□□ -1.03
LINC01001-201ENST00000526704 MRPL16Q9NX20 251 aaKnown RBP8.64□□□□□ -1.03
LINC01001-201ENST00000526704 ZNF256Q9Y2P7 627 aaPredicted RBP8.64□□□□□ -1.03
LINC01001-201ENST00000526704 USP9XQ93008 2570 aaPredicted RBP8.64□□□□□ -1.03
LINC01001-201ENST00000526704 SRSF9Q13242 221 aaKnown RBP eCLIP8.64□□□□□ -1.03
LINC01001-201ENST00000526704 CSMD2Q7Z408 3487 aa8.63□□□□□ -1.03
LINC01001-201ENST00000526704 SORL1Q92673 2214 aa8.63□□□□□ -1.03
LINC01001-201ENST00000526704 TSPAN13O95857 204 aa8.63□□□□□ -1.03
LINC01001-201ENST00000526704 SNRPD3P62318 126 aaKnown RBP8.63□□□□□ -1.03
LINC01001-201ENST00000526704 SPINK13Q1W4C9 94 aa8.63□□□□□ -1.03
LINC01001-201ENST00000526704 SYT8Q8NBV8 401 aa8.63□□□□□ -1.03
LINC01001-201ENST00000526704 IGHV1OR15-1A0A075B7D0 117 aa8.63□□□□□ -1.03
LINC01001-201ENST00000526704 NSUN5P1Q3KNT7 163 aa8.63□□□□□ -1.03
LINC01001-201ENST00000526704 AMELXQ99217 191 aa8.63□□□□□ -1.03
LINC01001-201ENST00000526704 NACAE9PAV3 2078 aa8.62□□□□□ -1.03
LINC01001-201ENST00000526704 TMEM170BQ5T4T1 132 aa8.62□□□□□ -1.03
LINC01001-201ENST00000526704 TMEM89A2RUT3 159 aa8.62□□□□□ -1.03
LINC01001-201ENST00000526704 RHOHQ15669 191 aa8.62□□□□□ -1.03
LINC01001-201ENST00000526704 NRGNQ92686 78 aa8.62□□□□□ -1.03
LINC01001-201ENST00000526704 OPRPNQ99935 248 aaPredicted RBP8.62□□□□□ -1.03
LINC01001-201ENST00000526704 GATA3P23771 443 aa8.61□□□□□ -1.03
LINC01001-201ENST00000526704 SYNJ2BPP57105 145 aa8.61□□□□□ -1.03
LINC01001-201ENST00000526704 TRPT1Q86TN4 253 aaKnown RBP8.61□□□□□ -1.03
LINC01001-201ENST00000526704 ANKRD17O75179 2603 aaKnown RBP8.61□□□□□ -1.03
LINC01001-201ENST00000526704 ZANQ9Y493 2812 aa8.61□□□□□ -1.03
LINC01001-201ENST00000526704 IGHV3-30P01768 117 aa8.61□□□□□ -1.03
LINC01001-201ENST00000526704 P0DMU3 169 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms