RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 MYMXA0A1B0GTQ4 84 aa15.11■□□□□ 0.01
SMIM3-201ENST00000526627 OR11H12B2RN74 326 aa15.11■□□□□ 0.01
SMIM3-201ENST00000526627 PRB1P04280 392 aa15.11■□□□□ 0.01
SMIM3-201ENST00000526627 RNF151Q2KHN1 245 aa15.11■□□□□ 0.01
SMIM3-201ENST00000526627 OR11H1Q8NG94 326 aa15.11■□□□□ 0.01
SMIM3-201ENST00000526627 OR11H2Q8NH07 326 aa15.11■□□□□ 0.01
SMIM3-201ENST00000526627 E9PLD3 99 aa15.1■□□□□ 0.01
SMIM3-201ENST00000526627 ELANEP08246 267 aa15.1■□□□□ 0.01
SMIM3-201ENST00000526627 SPINK13Q1W4C9 94 aa15.1■□□□□ 0.01
SMIM3-201ENST00000526627 MORN3Q6PF18 240 aaPredicted RBP15.1■□□□□ 0.01
SMIM3-201ENST00000526627 TP53TG1Q9Y2A0 90 aa15.1■□□□□ 0.01
SMIM3-201ENST00000526627 LINC01619G3V211 115 aa15.1■□□□□ 0.01
SMIM3-201ENST00000526627 VCYO14598 125 aa15.1■□□□□ 0.01
SMIM3-201ENST00000526627 HOXD3P31249 432 aaPredicted RBP15.1■□□□□ 0.01
SMIM3-201ENST00000526627 TRBV6-5A0A0K0K1A5 114 aa15.09■□□□□ 0.01
SMIM3-201ENST00000526627 F5H697 171 aa15.09■□□□□ 0.01
SMIM3-201ENST00000526627 FABP2P12104 132 aa15.09■□□□□ 0.01
SMIM3-201ENST00000526627 DOPEY2Q9Y3R5 2298 aa15.09■□□□□ 0.01
SMIM3-201ENST00000526627 IGLV4-69A0A075B6H9 119 aa15.09■□□□□ 0.01
SMIM3-201ENST00000526627 IGHV4-31P0DP07 118 aa15.09■□□□□ 0.01
SMIM3-201ENST00000526627 RPL39P62891 51 aaKnown RBP15.09■□□□□ 0.01
SMIM3-201ENST00000526627 AMTNQ6UX39 209 aa15.09■□□□□ 0.01
SMIM3-201ENST00000526627 UBE2E2Q96LR5 201 aa15.09■□□□□ 0.01
SMIM3-201ENST00000526627 PRADC1Q9BSG0 188 aa15.09■□□□□ 0.01
SMIM3-201ENST00000526627 IGHV1OR15-1A0A075B7D0 117 aa15.08■□□□□ 0
SMIM3-201ENST00000526627 TRBV27A0A0K0K1C4 114 aa15.08■□□□□ 0
SMIM3-201ENST00000526627 SDHAF1A6NFY7 115 aa15.08■□□□□ 0
SMIM3-201ENST00000526627 RNF152Q8N8N0 203 aa15.08■□□□□ 0
SMIM3-201ENST00000526627 OR5A1Q8NGJ0 315 aa15.08■□□□□ 0
SMIM3-201ENST00000526627 RIPPLY3P57055 190 aa15.08■□□□□ 0
SMIM3-201ENST00000526627 FAM74A4Q5TZK3 123 aa15.08■□□□□ 0
SMIM3-201ENST00000526627 USP9YO00507 2555 aaPredicted RBP15.07■□□□□ 0
SMIM3-201ENST00000526627 CR1P17927 2039 aa15.07■□□□□ 0
SMIM3-201ENST00000526627 BEX4Q9NWD9 120 aaPredicted RBP15.07■□□□□ 0
SMIM3-201ENST00000526627 M0QY20 66 aa15.06■□□□□ 0
SMIM3-201ENST00000526627 SAP30O75446 220 aa15.06■□□□□ 0
SMIM3-201ENST00000526627 COX6B1P14854 86 aa15.06■□□□□ 0
SMIM3-201ENST00000526627 HIST1H4GQ99525 98 aa15.06■□□□□ 0
SMIM3-201ENST00000526627 ZANQ9Y493 2812 aa15.06■□□□□ 0
SMIM3-201ENST00000526627 C11orf86A6NJI1 115 aa15.06■□□□□ 0
SMIM3-201ENST00000526627 PCP4P48539 62 aa15.06■□□□□ 0
SMIM3-201ENST00000526627 C12orf74Q32Q52 190 aa15.06■□□□□ 0
SMIM3-201ENST00000526627 KIR2DL4Q99706 377 aa15.06■□□□□ 0
SMIM3-201ENST00000526627 ANKRD17O75179 2603 aaKnown RBP15.06■□□□□ 0
SMIM3-201ENST00000526627 HOXA3O43365 443 aaPredicted RBP15.05■□□□□ 0
SMIM3-201ENST00000526627 FOXI2Q6ZQN5 318 aa15.05■□□□□ 0
SMIM3-201ENST00000526627 SYT8Q8NBV8 401 aa15.05■□□□□ 0
SMIM3-201ENST00000526627 LINC01549A6NIU2 74 aa15.05■□□□□ -0
SMIM3-201ENST00000526627 C21orf62-AS1Q17RA5 79 aa15.05■□□□□ -0
SMIM3-201ENST00000526627 C18orf65Q6ZTR6 163 aa15.05■□□□□ -0
SMIM3-201ENST00000526627 IGLL5B9A064 214 aa15.04■□□□□ -0
SMIM3-201ENST00000526627 KRTAP10-9P60411 292 aa15.04■□□□□ -0
SMIM3-201ENST00000526627 PMVKQ15126 192 aa15.04■□□□□ -0
SMIM3-201ENST00000526627 BBC3Q96PG8 261 aaPredicted RBP15.04■□□□□ -0
SMIM3-201ENST00000526627 TIMM17AQ99595 171 aa15.04■□□□□ -0
SMIM3-201ENST00000526627 RBMY1A1P0DJD3 496 aaKnown RBP15.04■□□□□ -0
SMIM3-201ENST00000526627 RBMY1CP0DJD4 496 aa15.04■□□□□ -0
SMIM3-201ENST00000526627 RBMY1FQ15415 496 aaKnown RBP15.04■□□□□ -0
SMIM3-201ENST00000526627 TMEM141Q96I45 108 aa15.04■□□□□ -0
SMIM3-201ENST00000526627 ACACBO00763 2458 aa15.03■□□□□ -0
SMIM3-201ENST00000526627 SORL1Q92673 2214 aa15.03■□□□□ -0
SMIM3-201ENST00000526627 EMP1P54849 157 aa15.03■□□□□ -0
SMIM3-201ENST00000526627 ZNF56Q15929 161 aa15.03■□□□□ -0
SMIM3-201ENST00000526627 TCTEX1D4Q5JR98 221 aa15.03■□□□□ -0
SMIM3-201ENST00000526627 MYO18BQ8IUG5 2567 aa15.03■□□□□ -0
SMIM3-201ENST00000526627 A0A1B0GWB2 263 aa15.03■□□□□ -0
SMIM3-201ENST00000526627 K7ERU9 68 aa15.03■□□□□ -0
SMIM3-201ENST00000526627 SLURP1P55000 103 aa15.02■□□□□ -0
SMIM3-201ENST00000526627 PLEKHB2Q96CS7 222 aa15.02■□□□□ -0
SMIM3-201ENST00000526627 ZNF256Q9Y2P7 627 aaPredicted RBP15.02■□□□□ -0
SMIM3-201ENST00000526627 POLQO75417 2590 aa15.02□□□□□ -0.01
SMIM3-201ENST00000526627 DEFB136Q30KP8 78 aa15.01□□□□□ -0.01
SMIM3-201ENST00000526627 CD300EQ496F6 205 aaPredicted RBP15.01□□□□□ -0.01
SMIM3-201ENST00000526627 ZNF815PA8K554 130 aa15.01□□□□□ -0.01
SMIM3-201ENST00000526627 KNCNA6PVL3 124 aa15□□□□□ -0.01
SMIM3-201ENST00000526627 KLHL30-AS1Q8NEE0 82 aa15□□□□□ -0.01
SMIM3-201ENST00000526627 ZNF876PQ49A33 203 aa15□□□□□ -0.01
SMIM3-201ENST00000526627 PAPPA-AS1Q5QFB9 102 aa15□□□□□ -0.01
SMIM3-201ENST00000526627 P0DMU3 169 aa14.99□□□□□ -0.01
SMIM3-201ENST00000526627 FAM231AP0DMU4 169 aa14.99□□□□□ -0.01
SMIM3-201ENST00000526627 FAM231CP0DMU5 169 aa14.99□□□□□ -0.01
SMIM3-201ENST00000526627 NSUN5P1Q3KNT7 163 aa14.99□□□□□ -0.01
SMIM3-201ENST00000526627 TRPT1Q86TN4 253 aaKnown RBP14.99□□□□□ -0.01
SMIM3-201ENST00000526627 Q8N2B8 174 aa14.99□□□□□ -0.01
SMIM3-201ENST00000526627 VPS25Q9BRG1 176 aa14.99□□□□□ -0.01
SMIM3-201ENST00000526627 ZNRF2Q8NHG8 242 aa14.99□□□□□ -0.01
SMIM3-201ENST00000526627 ZNF479Q96JC4 524 aa14.99□□□□□ -0.01
SMIM3-201ENST00000526627 PRRC2AP48634 2157 aaKnown RBP14.98□□□□□ -0.01
SMIM3-201ENST00000526627 TRGV11A0A075B6L2 103 aa14.98□□□□□ -0.01
SMIM3-201ENST00000526627 A8MTW9 85 aa14.98□□□□□ -0.01
SMIM3-201ENST00000526627 RHOHQ15669 191 aa14.98□□□□□ -0.01
SMIM3-201ENST00000526627 RBMY1BA6NDE4 496 aaKnown RBP14.97□□□□□ -0.01
SMIM3-201ENST00000526627 RBMY1EA6NEQ0 496 aaKnown RBP14.97□□□□□ -0.01
SMIM3-201ENST00000526627 RBMY1DP0C7P1 496 aaKnown RBP14.97□□□□□ -0.01
SMIM3-201ENST00000526627 DEFB131AP59861 70 aa14.97□□□□□ -0.01
SMIM3-201ENST00000526627 RRN3P1Q2M238 152 aa14.97□□□□□ -0.01
SMIM3-201ENST00000526627 OPRPNQ99935 248 aaPredicted RBP14.97□□□□□ -0.01
SMIM3-201ENST00000526627 FAM208BQ5VWN6 2430 aa14.96□□□□□ -0.01
SMIM3-201ENST00000526627 MXRA5Q9NR99 2828 aa14.96□□□□□ -0.01
SMIM3-201ENST00000526627 TSPEAR-AS2P59090 65 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms