RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 RBMY1FQ15415 496 aaKnown RBP11.74□□□□□ -0.53
USH1C-204ENST00000526313 ZMAT4Q9H898 229 aa11.74□□□□□ -0.53
USH1C-204ENST00000526313 JPT2Q9H910 190 aa11.74□□□□□ -0.53
USH1C-204ENST00000526313 TSSC4Q9Y5U2 329 aaPredicted RBP11.74□□□□□ -0.53
USH1C-204ENST00000526313 CUBNO60494 3623 aa11.73□□□□□ -0.53
USH1C-204ENST00000526313 MGPP08493 103 aa11.73□□□□□ -0.53
USH1C-204ENST00000526313 ZNF124Q15973 351 aa11.73□□□□□ -0.53
USH1C-204ENST00000526313 CLUHP3Q96NS8 147 aa11.73□□□□□ -0.53
USH1C-204ENST00000526313 CITED2Q99967 270 aaPredicted RBP11.73□□□□□ -0.53
USH1C-204ENST00000526313 ATP5LO75964 103 aa11.72□□□□□ -0.53
USH1C-204ENST00000526313 ZNF25P17030 456 aaPredicted RBP11.72□□□□□ -0.53
USH1C-204ENST00000526313 C18orf15Q96N68 181 aa11.72□□□□□ -0.53
USH1C-204ENST00000526313 TRGV11A0A075B6L2 103 aa11.72□□□□□ -0.53
USH1C-204ENST00000526313 ODF1Q14990 250 aa11.72□□□□□ -0.53
USH1C-204ENST00000526313 BATFQ16520 125 aa11.72□□□□□ -0.53
USH1C-204ENST00000526313 ORMDL2Q53FV1 153 aa11.72□□□□□ -0.53
USH1C-204ENST00000526313 SYT8Q8NBV8 401 aa11.72□□□□□ -0.53
USH1C-204ENST00000526313 ZNF418Q8TF45 676 aaPredicted RBP11.72□□□□□ -0.53
USH1C-204ENST00000526313 NDUFA7O95182 113 aa11.71□□□□□ -0.53
USH1C-204ENST00000526313 SLC25A34Q6PIV7 304 aa11.71□□□□□ -0.53
USH1C-204ENST00000526313 C11orf44Q8N8P7 122 aa11.71□□□□□ -0.53
USH1C-204ENST00000526313 GCN1Q92616 2671 aaKnown RBP11.71□□□□□ -0.54
USH1C-204ENST00000526313 CRYGDP07320 174 aa11.71□□□□□ -0.54
USH1C-204ENST00000526313 SUMO4Q6EEV6 95 aa11.71□□□□□ -0.54
USH1C-204ENST00000526313 DKK2Q9UBU2 259 aa11.71□□□□□ -0.54
USH1C-204ENST00000526313 COX8AP10176 69 aa11.7□□□□□ -0.54
USH1C-204ENST00000526313 POLR2KP53803 58 aaKnown RBP11.7□□□□□ -0.54
USH1C-204ENST00000526313 A0A1W2PRX2 142 aa11.69□□□□□ -0.54
USH1C-204ENST00000526313 FOSL1P15407 271 aa11.69□□□□□ -0.54
USH1C-204ENST00000526313 ANKRD39Q53RE8 183 aa11.69□□□□□ -0.54
USH1C-204ENST00000526313 LINC00467Q9BRT7 94 aa11.69□□□□□ -0.54
USH1C-204ENST00000526313 FASNP49327 2511 aaKnown RBP11.69□□□□□ -0.54
USH1C-204ENST00000526313 A0A087WWL8 130 aa11.69□□□□□ -0.54
USH1C-204ENST00000526313 TRBV6-5A0A0K0K1A5 114 aa11.69□□□□□ -0.54
USH1C-204ENST00000526313 NUDT3O95989 172 aa11.69□□□□□ -0.54
USH1C-204ENST00000526313 TOMM6Q96B49 74 aa11.69□□□□□ -0.54
USH1C-204ENST00000526313 PRSS1P07477 247 aa11.68□□□□□ -0.54
USH1C-204ENST00000526313 ODF3L2Q3SX64 289 aa11.68□□□□□ -0.54
USH1C-204ENST00000526313 CSTL1Q9H114 145 aa11.68□□□□□ -0.54
USH1C-204ENST00000526313 MTORP42345 2549 aa11.68□□□□□ -0.54
USH1C-204ENST00000526313 SMR3AQ99954 134 aa11.68□□□□□ -0.54
USH1C-204ENST00000526313 TP73-AS1Q9UF72 201 aa11.68□□□□□ -0.54
USH1C-204ENST00000526313 HHLA3Q9XRX5 114 aa11.68□□□□□ -0.54
USH1C-204ENST00000526313 CBY3A6NI87 242 aa11.67□□□□□ -0.54
USH1C-204ENST00000526313 ADARB2-AS1A8MUL3 147 aa11.67□□□□□ -0.54
USH1C-204ENST00000526313 FGF6P10767 208 aa11.67□□□□□ -0.54
USH1C-204ENST00000526313 PROK1P58294 105 aa11.67□□□□□ -0.54
USH1C-204ENST00000526313 COL5A1-AS1Q5SY13 56 aa11.67□□□□□ -0.54
USH1C-204ENST00000526313 STPG4Q8N801 248 aa11.67□□□□□ -0.54
USH1C-204ENST00000526313 PTH2Q96A98 100 aa11.67□□□□□ -0.54
USH1C-204ENST00000526313 M0QY20 66 aa11.66□□□□□ -0.54
USH1C-204ENST00000526313 DLEU1O43261 78 aa11.66□□□□□ -0.54
USH1C-204ENST00000526313 PIK3CD-AS1Q5SR53 167 aa11.66□□□□□ -0.54
USH1C-204ENST00000526313 TMEM208Q9BTX3 173 aa11.66□□□□□ -0.54
USH1C-204ENST00000526313 ZNF876PQ49A33 203 aa11.66□□□□□ -0.54
USH1C-204ENST00000526313 TRAV12-1A0A0B4J245 112 aa11.65□□□□□ -0.54
USH1C-204ENST00000526313 LY6G6DO95868 133 aa11.65□□□□□ -0.54
USH1C-204ENST00000526313 MORN3Q6PF18 240 aaPredicted RBP11.65□□□□□ -0.54
USH1C-204ENST00000526313 A0A087WX48 190 aa11.65□□□□□ -0.55
USH1C-204ENST00000526313 TRBV27A0A0K0K1C4 114 aa11.65□□□□□ -0.55
USH1C-204ENST00000526313 F5H697 171 aa11.65□□□□□ -0.55
USH1C-204ENST00000526313 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.65□□□□□ -0.55
USH1C-204ENST00000526313 VCYO14598 125 aa11.65□□□□□ -0.55
USH1C-204ENST00000526313 GAGE1Q13065 139 aa11.65□□□□□ -0.55
USH1C-204ENST00000526313 BOD1L2Q8IYS8 172 aa11.65□□□□□ -0.55
USH1C-204ENST00000526313 JMJD8Q96S16 334 aa11.65□□□□□ -0.55
USH1C-204ENST00000526313 EDA2RQ9HAV5 297 aa11.65□□□□□ -0.55
USH1C-204ENST00000526313 IGKCP01834 107 aa11.64□□□□□ -0.55
USH1C-204ENST00000526313 C2orf91Q6ZV80 131 aa11.64□□□□□ -0.55
USH1C-204ENST00000526313 DPM2O94777 84 aa11.63□□□□□ -0.55
USH1C-204ENST00000526313 HINT1P49773 126 aaPredicted RBP11.63□□□□□ -0.55
USH1C-204ENST00000526313 C2orf66Q6UXQ4 117 aa11.63□□□□□ -0.55
USH1C-204ENST00000526313 FAM74A4Q5TZK3 123 aa11.63□□□□□ -0.55
USH1C-204ENST00000526313 SCGB3A1Q96QR1 104 aa11.63□□□□□ -0.55
USH1C-204ENST00000526313 SDHAF1A6NFY7 115 aa11.62□□□□□ -0.55
USH1C-204ENST00000526313 LINC01549A6NIU2 74 aa11.62□□□□□ -0.55
USH1C-204ENST00000526313 TRPT1Q86TN4 253 aaKnown RBP11.62□□□□□ -0.55
USH1C-204ENST00000526313 NEXN-AS1Q8NBZ9 246 aa11.62□□□□□ -0.55
USH1C-204ENST00000526313 MRPL35Q9NZE8 188 aaKnown RBP11.62□□□□□ -0.55
USH1C-204ENST00000526313 HIVEP2P31629 2446 aa11.62□□□□□ -0.55
USH1C-204ENST00000526313 HECTD1Q9ULT8 2610 aa11.62□□□□□ -0.55
USH1C-204ENST00000526313 M0R2P5 195 aa11.62□□□□□ -0.55
USH1C-204ENST00000526313 INSP01308 110 aa11.62□□□□□ -0.55
USH1C-204ENST00000526313 CMC4P56277 68 aaPredicted RBP11.62□□□□□ -0.55
USH1C-204ENST00000526313 UFSP1Q6NVU6 142 aa11.62□□□□□ -0.55
USH1C-204ENST00000526313 ZFP2Q6ZN57 461 aa11.62□□□□□ -0.55
USH1C-204ENST00000526313 NEGR1Q7Z3B1 354 aa11.62□□□□□ -0.55
USH1C-204ENST00000526313 ERASQ7Z444 233 aa11.62□□□□□ -0.55
USH1C-204ENST00000526313 C11orf72Q8NBR9 251 aa11.62□□□□□ -0.55
USH1C-204ENST00000526313 OR11H12B2RN74 326 aa11.61□□□□□ -0.55
USH1C-204ENST00000526313 IGLV1-51P01701 117 aa11.61□□□□□ -0.55
USH1C-204ENST00000526313 RIPPLY3P57055 190 aa11.61□□□□□ -0.55
USH1C-204ENST00000526313 ZNF415Q09FC8 603 aa11.61□□□□□ -0.55
USH1C-204ENST00000526313 ZNF56Q15929 161 aa11.61□□□□□ -0.55
USH1C-204ENST00000526313 WNK1Q9H4A3 2382 aa11.61□□□□□ -0.55
USH1C-204ENST00000526313 SIVA1O15304 175 aa11.6□□□□□ -0.55
USH1C-204ENST00000526313 PRM2P04554 102 aa11.6□□□□□ -0.55
USH1C-204ENST00000526313 MPV17L2Q567V2 206 aa11.6□□□□□ -0.55
USH1C-204ENST00000526313 FAM110AQ9BQ89 295 aa11.6□□□□□ -0.55
USH1C-204ENST00000526313 H7C1H1 209 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms