RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 NEGR1Q7Z3B1 354 aa12.24□□□□□ -0.45
CCDC90B-203ENST00000525503 Q96MF0 132 aa12.24□□□□□ -0.45
CCDC90B-203ENST00000525503 PRSS29PA6NIE9 313 aa12.23□□□□□ -0.45
CCDC90B-203ENST00000525503 OR11H12B2RN74 326 aa12.23□□□□□ -0.45
CCDC90B-203ENST00000525503 AMTNQ6UX39 209 aa12.23□□□□□ -0.45
CCDC90B-203ENST00000525503 MAPKAPK5-AS1Q8N8E1 139 aa12.23□□□□□ -0.45
CCDC90B-203ENST00000525503 OR11H1Q8NG94 326 aa12.23□□□□□ -0.45
CCDC90B-203ENST00000525503 OR11H2Q8NH07 326 aa12.23□□□□□ -0.45
CCDC90B-203ENST00000525503 TMEM141Q96I45 108 aa12.23□□□□□ -0.45
CCDC90B-203ENST00000525503 CSPG4Q6UVK1 2322 aa12.23□□□□□ -0.45
CCDC90B-203ENST00000525503 TRAV2A0A0B4J234 112 aa12.23□□□□□ -0.45
CCDC90B-203ENST00000525503 TRBV27A0A0K0K1C4 114 aa12.23□□□□□ -0.45
CCDC90B-203ENST00000525503 SDHAF1A6NFY7 115 aa12.23□□□□□ -0.45
CCDC90B-203ENST00000525503 LINC01619G3V211 115 aa12.23□□□□□ -0.45
CCDC90B-203ENST00000525503 H3BUT2 72 aa12.23□□□□□ -0.45
CCDC90B-203ENST00000525503 SLURP1P55000 103 aa12.23□□□□□ -0.45
CCDC90B-203ENST00000525503 FAM74A4Q5TZK3 123 aa12.23□□□□□ -0.45
CCDC90B-203ENST00000525503 CEND1Q8N111 149 aa12.23□□□□□ -0.45
CCDC90B-203ENST00000525503 TM2D2Q9BX73 214 aa12.23□□□□□ -0.45
CCDC90B-203ENST00000525503 PEMTQ9UBM1 199 aa12.23□□□□□ -0.45
CCDC90B-203ENST00000525503 TP53TG1Q9Y2A0 90 aa12.23□□□□□ -0.45
CCDC90B-203ENST00000525503 ZNF462Q96JM2 2506 aa12.22□□□□□ -0.45
CCDC90B-203ENST00000525503 FXYD2P54710 66 aa12.21□□□□□ -0.45
CCDC90B-203ENST00000525503 ZNF56Q15929 161 aa12.21□□□□□ -0.45
CCDC90B-203ENST00000525503 PAPPA-AS1Q5QFB9 102 aa12.21□□□□□ -0.45
CCDC90B-203ENST00000525503 C4orf3Q8WVX3 66 aa12.21□□□□□ -0.45
CCDC90B-203ENST00000525503 RAB37Q96AX2 223 aa12.21□□□□□ -0.45
CCDC90B-203ENST00000525503 MUC4Q99102 2169 aa12.21□□□□□ -0.45
CCDC90B-203ENST00000525503 MYMXA0A1B0GTQ4 84 aa12.21□□□□□ -0.46
CCDC90B-203ENST00000525503 IGIPA6NJ69 53 aa12.21□□□□□ -0.46
CCDC90B-203ENST00000525503 CRYGDP07320 174 aa12.21□□□□□ -0.46
CCDC90B-203ENST00000525503 RIPPLY3P57055 190 aa12.21□□□□□ -0.46
CCDC90B-203ENST00000525503 TRPT1Q86TN4 253 aaKnown RBP12.21□□□□□ -0.46
CCDC90B-203ENST00000525503 E9PLD3 99 aa12.2□□□□□ -0.46
CCDC90B-203ENST00000525503 M0QY20 66 aa12.2□□□□□ -0.46
CCDC90B-203ENST00000525503 DEFB136Q30KP8 78 aa12.2□□□□□ -0.46
CCDC90B-203ENST00000525503 TMEM86BQ8N661 226 aa12.2□□□□□ -0.46
CCDC90B-203ENST00000525503 TEX29Q8N6K0 151 aa12.2□□□□□ -0.46
CCDC90B-203ENST00000525503 JMJD8Q96S16 334 aa12.2□□□□□ -0.46
CCDC90B-203ENST00000525503 TIMM17AQ99595 171 aa12.2□□□□□ -0.46
CCDC90B-203ENST00000525503 A8MTW9 85 aa12.19□□□□□ -0.46
CCDC90B-203ENST00000525503 K7EP34 96 aa12.19□□□□□ -0.46
CCDC90B-203ENST00000525503 PMVKQ15126 192 aa12.19□□□□□ -0.46
CCDC90B-203ENST00000525503 ZNF876PQ49A33 203 aa12.19□□□□□ -0.46
CCDC90B-203ENST00000525503 C18orf65Q6ZTR6 163 aa12.19□□□□□ -0.46
CCDC90B-203ENST00000525503 A0A1W2PPM0 123 aa12.19□□□□□ -0.46
CCDC90B-203ENST00000525503 PCP4P48539 62 aa12.19□□□□□ -0.46
CCDC90B-203ENST00000525503 DEFB131AP59861 70 aa12.19□□□□□ -0.46
CCDC90B-203ENST00000525503 RHOHQ15669 191 aa12.19□□□□□ -0.46
CCDC90B-203ENST00000525503 UFSP1Q6NVU6 142 aa12.19□□□□□ -0.46
CCDC90B-203ENST00000525503 RNASE8Q8TDE3 154 aaKnown RBP12.19□□□□□ -0.46
CCDC90B-203ENST00000525503 ZNF256Q9Y2P7 627 aaPredicted RBP12.19□□□□□ -0.46
CCDC90B-203ENST00000525503 USP9YO00507 2555 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-203ENST00000525503 GAGE12BA1L429 117 aa12.18□□□□□ -0.46
CCDC90B-203ENST00000525503 KNCNA6PVL3 124 aa12.18□□□□□ -0.46
CCDC90B-203ENST00000525503 TSHBP01222 138 aa12.18□□□□□ -0.46
CCDC90B-203ENST00000525503 HIST1H4GQ99525 98 aa12.18□□□□□ -0.46
CCDC90B-203ENST00000525503 ZFYVE26Q68DK2 2539 aa12.18□□□□□ -0.46
CCDC90B-203ENST00000525503 CR1P17927 2039 aa12.18□□□□□ -0.46
CCDC90B-203ENST00000525503 CSMD2Q7Z408 3487 aa12.18□□□□□ -0.46
CCDC90B-203ENST00000525503 FABP2P12104 132 aa12.17□□□□□ -0.46
CCDC90B-203ENST00000525503 PRADC1Q9BSG0 188 aa12.17□□□□□ -0.46
CCDC90B-203ENST00000525503 CST9LQ9H4G1 147 aa12.17□□□□□ -0.46
CCDC90B-203ENST00000525503 PRRC2AP48634 2157 aaKnown RBP12.17□□□□□ -0.46
CCDC90B-203ENST00000525503 H3BMM0 161 aa12.17□□□□□ -0.46
CCDC90B-203ENST00000525503 HERVK_113P61574 105 aa12.17□□□□□ -0.46
CCDC90B-203ENST00000525503 SAMD5Q5TGI4 173 aa12.17□□□□□ -0.46
CCDC90B-203ENST00000525503 MORN3Q6PF18 240 aaPredicted RBP12.17□□□□□ -0.46
CCDC90B-203ENST00000525503 KRTAP1-3Q8IUG1 177 aa12.17□□□□□ -0.46
CCDC90B-203ENST00000525503 ZANQ9Y493 2812 aa12.16□□□□□ -0.46
CCDC90B-203ENST00000525503 RPL39P62891 51 aaKnown RBP12.16□□□□□ -0.46
CCDC90B-203ENST00000525503 NSUN5P1Q3KNT7 163 aa12.16□□□□□ -0.46
CCDC90B-203ENST00000525503 KHDC1LQ5JSQ8 128 aa12.16□□□□□ -0.46
CCDC90B-203ENST00000525503 FAM208BQ5VWN6 2430 aa12.16□□□□□ -0.46
CCDC90B-203ENST00000525503 OR5A1Q8NGJ0 315 aa12.16□□□□□ -0.46
CCDC90B-203ENST00000525503 NAA38Q9BRA0 125 aaKnown RBP12.16□□□□□ -0.46
CCDC90B-203ENST00000525503 NHP2Q9NX24 153 aaKnown RBP12.16□□□□□ -0.46
CCDC90B-203ENST00000525503 LRRK2Q5S007 2527 aa12.16□□□□□ -0.46
CCDC90B-203ENST00000525503 DYNLRB2Q8TF09 96 aa12.15□□□□□ -0.46
CCDC90B-203ENST00000525503 POLQO75417 2590 aa12.15□□□□□ -0.46
CCDC90B-203ENST00000525503 IGLV4-69A0A075B6H9 119 aa12.15□□□□□ -0.46
CCDC90B-203ENST00000525503 TMEM61Q8N0U2 210 aa12.15□□□□□ -0.46
CCDC90B-203ENST00000525503 PHLDA1Q8WV24 401 aaPredicted RBP12.15□□□□□ -0.46
CCDC90B-203ENST00000525503 EDA2RQ9HAV5 297 aa12.15□□□□□ -0.46
CCDC90B-203ENST00000525503 SPCS1Q9Y6A9 102 aa12.15□□□□□ -0.46
CCDC90B-203ENST00000525503 C11orf86A6NJI1 115 aa12.14□□□□□ -0.47
CCDC90B-203ENST00000525503 I3L3M4 83 aa12.14□□□□□ -0.47
CCDC90B-203ENST00000525503 RBMY1A1P0DJD3 496 aaKnown RBP12.14□□□□□ -0.47
CCDC90B-203ENST00000525503 RBMY1CP0DJD4 496 aa12.14□□□□□ -0.47
CCDC90B-203ENST00000525503 SCGB2A2Q13296 93 aa12.14□□□□□ -0.47
CCDC90B-203ENST00000525503 RBMY1FQ15415 496 aaKnown RBP12.14□□□□□ -0.47
CCDC90B-203ENST00000525503 C21orf62-AS1Q17RA5 79 aa12.14□□□□□ -0.47
CCDC90B-203ENST00000525503 KLHL30-AS1Q8NEE0 82 aa12.14□□□□□ -0.47
CCDC90B-203ENST00000525503 MXRA5Q9NR99 2828 aa12.14□□□□□ -0.47
CCDC90B-203ENST00000525503 CENPEQ02224 2701 aa12.14□□□□□ -0.47
CCDC90B-203ENST00000525503 TRBV7-3A0A075B6L6 115 aa12.13□□□□□ -0.47
CCDC90B-203ENST00000525503 DLX4Q92988 240 aaPredicted RBP12.13□□□□□ -0.47
CCDC90B-203ENST00000525503 ZNF815PA8K554 130 aa12.13□□□□□ -0.47
CCDC90B-203ENST00000525503 K7ERJ3 54 aa12.13□□□□□ -0.47
CCDC90B-203ENST00000525503 RBX1P62877 108 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms