RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 EVI2AP22794 236 aa11.27□□□□□ -0.61
TSPAN4-213ENST00000524895 FAM74A4Q5TZK3 123 aa11.27□□□□□ -0.61
TSPAN4-213ENST00000524895 CFAP126Q5VTH2 177 aa11.27□□□□□ -0.61
TSPAN4-213ENST00000524895 OR4C5Q8NGB2 326 aa11.27□□□□□ -0.61
TSPAN4-213ENST00000524895 U3KQK5 164 aa11.27□□□□□ -0.61
TSPAN4-213ENST00000524895 RS1O15537 224 aa11.26□□□□□ -0.61
TSPAN4-213ENST00000524895 IGHV3-53P01767 116 aa11.26□□□□□ -0.61
TSPAN4-213ENST00000524895 C11orf45Q8TAV5 145 aa11.26□□□□□ -0.61
TSPAN4-213ENST00000524895 C18orf15Q96N68 181 aa11.26□□□□□ -0.61
TSPAN4-213ENST00000524895 TMEM191AQ9H0A3 160 aa11.26□□□□□ -0.61
TSPAN4-213ENST00000524895 DPH3P1Q9H4G8 78 aa11.26□□□□□ -0.61
TSPAN4-213ENST00000524895 PRKDCP78527 4128 aaKnown RBP11.25□□□□□ -0.61
TSPAN4-213ENST00000524895 COL7A1Q02388 2944 aa11.25□□□□□ -0.61
TSPAN4-213ENST00000524895 RHODO00212 210 aa11.25□□□□□ -0.61
TSPAN4-213ENST00000524895 MGPP08493 103 aa11.25□□□□□ -0.61
TSPAN4-213ENST00000524895 COX19Q49B96 90 aa11.25□□□□□ -0.61
TSPAN4-213ENST00000524895 SAMD10Q9BYL1 202 aa11.25□□□□□ -0.61
TSPAN4-213ENST00000524895 DNAH9Q9NYC9 4486 aa11.25□□□□□ -0.61
TSPAN4-213ENST00000524895 IGHV3-73A0A0B4J1V6 119 aa11.24□□□□□ -0.61
TSPAN4-213ENST00000524895 CRYGDP07320 174 aa11.24□□□□□ -0.61
TSPAN4-213ENST00000524895 ZNF56Q15929 161 aa11.24□□□□□ -0.61
TSPAN4-213ENST00000524895 C12orf74Q32Q52 190 aa11.24□□□□□ -0.61
TSPAN4-213ENST00000524895 POM121L12Q8N7R1 296 aa11.24□□□□□ -0.61
TSPAN4-213ENST00000524895 GATD1Q8NB37 220 aa11.24□□□□□ -0.61
TSPAN4-213ENST00000524895 ZNF479Q96JC4 524 aa11.24□□□□□ -0.61
TSPAN4-213ENST00000524895 HUWE1Q7Z6Z7 4374 aaKnown RBP11.23□□□□□ -0.61
TSPAN4-213ENST00000524895 COLCA2A8K830 154 aa11.23□□□□□ -0.61
TSPAN4-213ENST00000524895 HLA-DQA1P01909 254 aa11.23□□□□□ -0.61
TSPAN4-213ENST00000524895 ATP5G1P05496 136 aa11.23□□□□□ -0.61
TSPAN4-213ENST00000524895 NANOS2P60321 138 aaKnown RBP11.23□□□□□ -0.61
TSPAN4-213ENST00000524895 ZFP2Q6ZN57 461 aa11.23□□□□□ -0.61
TSPAN4-213ENST00000524895 TMEM136Q6ZRR5 245 aa11.23□□□□□ -0.61
TSPAN4-213ENST00000524895 AMN1Q8IY45 258 aa11.23□□□□□ -0.61
TSPAN4-213ENST00000524895 GNB1LQ9BYB4 327 aa11.23□□□□□ -0.61
TSPAN4-213ENST00000524895 KIF25-AS1Q9Y6Z4 181 aa11.23□□□□□ -0.61
TSPAN4-213ENST00000524895 F5H697 171 aa11.22□□□□□ -0.61
TSPAN4-213ENST00000524895 CIDEAO60543 219 aa11.22□□□□□ -0.61
TSPAN4-213ENST00000524895 MT-ND6P03923 174 aa11.22□□□□□ -0.61
TSPAN4-213ENST00000524895 FAM104BQ5XKR9 115 aa11.22□□□□□ -0.61
TSPAN4-213ENST00000524895 UFSP1Q6NVU6 142 aa11.22□□□□□ -0.61
TSPAN4-213ENST00000524895 TRGV4A0A0C4DH28 118 aa11.21□□□□□ -0.61
TSPAN4-213ENST00000524895 HTN3P15516 51 aa11.21□□□□□ -0.61
TSPAN4-213ENST00000524895 RAB5AP20339 215 aa11.21□□□□□ -0.61
TSPAN4-213ENST00000524895 Q6ZTC4 211 aa11.21□□□□□ -0.61
TSPAN4-213ENST00000524895 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.21□□□□□ -0.61
TSPAN4-213ENST00000524895 FRZBQ92765 325 aa11.21□□□□□ -0.61
TSPAN4-213ENST00000524895 APCSP02743 223 aa11.2□□□□□ -0.62
TSPAN4-213ENST00000524895 RAB4AP20338 218 aa11.2□□□□□ -0.62
TSPAN4-213ENST00000524895 RPS10P46783 165 aaKnown RBP11.2□□□□□ -0.62
TSPAN4-213ENST00000524895 LINC00315P59091 139 aa11.2□□□□□ -0.62
TSPAN4-213ENST00000524895 EDA2RQ9HAV5 297 aa11.2□□□□□ -0.62
TSPAN4-213ENST00000524895 TRAPPC1Q9Y5R8 145 aa11.2□□□□□ -0.62
TSPAN4-213ENST00000524895 SLAQ13239 276 aa11.19□□□□□ -0.62
TSPAN4-213ENST00000524895 SUMO4Q6EEV6 95 aa11.19□□□□□ -0.62
TSPAN4-213ENST00000524895 RNF185Q96GF1 192 aa11.19□□□□□ -0.62
TSPAN4-213ENST00000524895 MRPL18Q9H0U6 180 aaKnown RBP11.19□□□□□ -0.62
TSPAN4-213ENST00000524895 TRAV26-2A0A0B4J265 109 aa11.18□□□□□ -0.62
TSPAN4-213ENST00000524895 F5H768 121 aa11.18□□□□□ -0.62
TSPAN4-213ENST00000524895 GATA1P15976 413 aaPredicted RBP11.18□□□□□ -0.62
TSPAN4-213ENST00000524895 HOXA5P20719 270 aa11.18□□□□□ -0.62
TSPAN4-213ENST00000524895 FHL2Q14192 279 aa11.18□□□□□ -0.62
TSPAN4-213ENST00000524895 MRPL51Q4U2R6 128 aaKnown RBP11.18□□□□□ -0.62
TSPAN4-213ENST00000524895 MRAP2Q96G30 205 aa11.18□□□□□ -0.62
TSPAN4-213ENST00000524895 STAB2Q8WWQ8 2551 aa11.18□□□□□ -0.62
TSPAN4-213ENST00000524895 H7C1H1 209 aa11.17□□□□□ -0.62
TSPAN4-213ENST00000524895 NCR2O95944 276 aa11.17□□□□□ -0.62
TSPAN4-213ENST00000524895 FABP9Q0Z7S8 132 aa11.17□□□□□ -0.62
TSPAN4-213ENST00000524895 NACAE9PAV3 2078 aa11.16□□□□□ -0.62
TSPAN4-213ENST00000524895 TRAV10A0A0B4J240 114 aa11.16□□□□□ -0.62
TSPAN4-213ENST00000524895 D6R8Y8 96 aa11.16□□□□□ -0.62
TSPAN4-213ENST00000524895 SMKR1H3BMG3 65 aa11.16□□□□□ -0.62
TSPAN4-213ENST00000524895 K7EQD1 137 aa11.16□□□□□ -0.62
TSPAN4-213ENST00000524895 CKS2P33552 79 aa11.16□□□□□ -0.62
TSPAN4-213ENST00000524895 Q6ZSN1 163 aa11.16□□□□□ -0.62
TSPAN4-213ENST00000524895 PRO0255Q9UI72 69 aa11.16□□□□□ -0.62
TSPAN4-213ENST00000524895 HHLA3Q9XRX5 114 aa11.16□□□□□ -0.62
TSPAN4-213ENST00000524895 DEFB131BA0A096LNP1 70 aa11.15□□□□□ -0.62
TSPAN4-213ENST00000524895 TRBV6-4A0A1B0GX49 114 aa11.15□□□□□ -0.62
TSPAN4-213ENST00000524895 PPBPP02775 128 aa11.15□□□□□ -0.62
TSPAN4-213ENST00000524895 RHOHQ15669 191 aa11.15□□□□□ -0.62
TSPAN4-213ENST00000524895 KIAA1644Q3SXP7 199 aa11.15□□□□□ -0.62
TSPAN4-213ENST00000524895 ORMDL3Q8N138 153 aa11.15□□□□□ -0.62
TSPAN4-213ENST00000524895 SLC25A29Q8N8R3 303 aa11.15□□□□□ -0.62
TSPAN4-213ENST00000524895 M0QY20 66 aa11.14□□□□□ -0.63
TSPAN4-213ENST00000524895 CRYBA4P53673 196 aa11.14□□□□□ -0.63
TSPAN4-213ENST00000524895 PRADC1Q9BSG0 188 aa11.14□□□□□ -0.63
TSPAN4-213ENST00000524895 TRAV26-1A0A087WT03 109 aa11.13□□□□□ -0.63
TSPAN4-213ENST00000524895 TRGC2P03986 189 aa11.13□□□□□ -0.63
TSPAN4-213ENST00000524895 P0DMU3 169 aa11.13□□□□□ -0.63
TSPAN4-213ENST00000524895 FAM231AP0DMU4 169 aa11.13□□□□□ -0.63
TSPAN4-213ENST00000524895 FAM231CP0DMU5 169 aa11.13□□□□□ -0.63
TSPAN4-213ENST00000524895 OR10J3Q5JRS4 329 aa11.13□□□□□ -0.63
TSPAN4-213ENST00000524895 PRELID3AQ96N28 172 aa11.13□□□□□ -0.63
TSPAN4-213ENST00000524895 A0A0J9YY99 117 aa11.12□□□□□ -0.63
TSPAN4-213ENST00000524895 TRBV10-1A0A0K0K1A3 114 aa11.12□□□□□ -0.63
TSPAN4-213ENST00000524895 PAX4O43316 350 aa11.12□□□□□ -0.63
TSPAN4-213ENST00000524895 GAS8-AS1O95177 125 aa11.12□□□□□ -0.63
TSPAN4-213ENST00000524895 PPP1R17O96001 155 aa11.12□□□□□ -0.63
TSPAN4-213ENST00000524895 PHLDA1Q8WV24 401 aaPredicted RBP11.12□□□□□ -0.63
TSPAN4-213ENST00000524895 RPL39LQ96EH5 51 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms