RNA–Protein interactions for RNA: ENST00000524798.1

LTBP3-203, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-203ENST00000524798 SFRP2Q96HF1 295 aa12.99□□□□□ -0.33
LTBP3-203ENST00000524798 SMR3BP02814 79 aaPredicted RBP12.98□□□□□ -0.33
LTBP3-203ENST00000524798 RGS21Q2M5E4 152 aa12.98□□□□□ -0.33
LTBP3-203ENST00000524798 TOR2AQ5JU69 321 aa12.98□□□□□ -0.33
LTBP3-203ENST00000524798 DAZ4Q86SG3 579 aaKnown RBP12.98□□□□□ -0.33
LTBP3-203ENST00000524798 DAZ3Q9NR90 486 aaKnown RBP12.98□□□□□ -0.33
LTBP3-203ENST00000524798 PHLDA3Q9Y5J5 127 aa12.98□□□□□ -0.33
LTBP3-203ENST00000524798 WFDC2Q14508 124 aa12.97□□□□□ -0.33
LTBP3-203ENST00000524798 CST9LP1Q5W188 147 aa12.97□□□□□ -0.33
LTBP3-203ENST00000524798 TPT1P13693 172 aaKnown RBP12.96□□□□□ -0.33
LTBP3-203ENST00000524798 FAM74A4Q5TZK3 123 aa12.96□□□□□ -0.33
LTBP3-203ENST00000524798 FAT1Q14517 4588 aa12.96□□□□□ -0.33
LTBP3-203ENST00000524798 A0A087WWL8 130 aa12.95□□□□□ -0.34
LTBP3-203ENST00000524798 ZNF345Q14585 488 aa12.95□□□□□ -0.34
LTBP3-203ENST00000524798 NIT1Q86X76 327 aa12.95□□□□□ -0.34
LTBP3-203ENST00000524798 ZFP82Q8N141 532 aa12.95□□□□□ -0.34
LTBP3-203ENST00000524798 KCNRGQ8N5I3 272 aa12.95□□□□□ -0.34
LTBP3-203ENST00000524798 MBD3L1Q8WWY6 194 aa12.95□□□□□ -0.34
LTBP3-203ENST00000524798 FAM30AQ9NZY2 134 aa12.95□□□□□ -0.34
LTBP3-203ENST00000524798 COX11Q9Y6N1 276 aa12.95□□□□□ -0.34
LTBP3-203ENST00000524798 TRBV10-1A0A0K0K1A3 114 aa12.94□□□□□ -0.34
LTBP3-203ENST00000524798 FAM229AH3BQW9 127 aa12.94□□□□□ -0.34
LTBP3-203ENST00000524798 PAGE4O60829 102 aa12.94□□□□□ -0.34
LTBP3-203ENST00000524798 SEC11BP0C7V7 166 aa12.94□□□□□ -0.34
LTBP3-203ENST00000524798 AKR1C3P42330 323 aa12.94□□□□□ -0.34
LTBP3-203ENST00000524798 HAMPP81172 84 aa12.94□□□□□ -0.34
LTBP3-203ENST00000524798 TMSB15BA0A087X1C1 80 aa12.93□□□□□ -0.34
LTBP3-203ENST00000524798 UMAD1C9J7I0 102 aa12.93□□□□□ -0.34
LTBP3-203ENST00000524798 SMLR1H3BR10 107 aa12.93□□□□□ -0.34
LTBP3-203ENST00000524798 M0R381 172 aa12.93□□□□□ -0.34
LTBP3-203ENST00000524798 S100A9P06702 114 aaKnown RBP12.93□□□□□ -0.34
LTBP3-203ENST00000524798 Q6ZSA8 131 aa12.92□□□□□ -0.34
LTBP3-203ENST00000524798 SFT2D1Q8WV19 159 aa12.92□□□□□ -0.34
LTBP3-203ENST00000524798 CHCHD7Q9BUK0 85 aa12.92□□□□□ -0.34
LTBP3-203ENST00000524798 HMSDA8MTL9 139 aa12.91□□□□□ -0.34
LTBP3-203ENST00000524798 CXCL1P09341 107 aa12.91□□□□□ -0.34
LTBP3-203ENST00000524798 UBE2D3P61077 147 aa12.91□□□□□ -0.34
LTBP3-203ENST00000524798 UBE2D2P62837 147 aa12.91□□□□□ -0.34
LTBP3-203ENST00000524798 RMI2Q96E14 147 aa12.91□□□□□ -0.34
LTBP3-203ENST00000524798 MLST8Q9BVC4 326 aa12.91□□□□□ -0.34
LTBP3-203ENST00000524798 URGCP-MRPS24S4R325 110 aa12.91□□□□□ -0.34
LTBP3-203ENST00000524798 VPS13BQ7Z7G8 4022 aa12.91□□□□□ -0.34
LTBP3-203ENST00000524798 DMBT1Q9UGM3 2413 aaPredicted RBP12.91□□□□□ -0.34
LTBP3-203ENST00000524798 TRBV7-3A0A075B6L6 115 aa12.9□□□□□ -0.34
LTBP3-203ENST00000524798 RPL36AP83881 106 aaKnown RBP12.9□□□□□ -0.34
LTBP3-203ENST00000524798 OR10G8Q8NGN5 311 aa12.9□□□□□ -0.34
LTBP3-203ENST00000524798 FAM213BQ8TBF2 198 aa12.9□□□□□ -0.34
LTBP3-203ENST00000524798 RPL36ALQ969Q0 106 aaKnown RBP12.9□□□□□ -0.34
LTBP3-203ENST00000524798 FLG2Q5D862 2391 aaPredicted RBP12.89□□□□□ -0.35
LTBP3-203ENST00000524798 LECT2O14960 151 aa12.89□□□□□ -0.35
LTBP3-203ENST00000524798 BAALCQ8WXS3 180 aa12.89□□□□□ -0.35
LTBP3-203ENST00000524798 SSBP4Q9BWG4 385 aaPredicted RBP12.89□□□□□ -0.35
LTBP3-203ENST00000524798 A0A0D9SG52 128 aa12.88□□□□□ -0.35
LTBP3-203ENST00000524798 SCO2A0A1W2PP80 73 aa12.88□□□□□ -0.35
LTBP3-203ENST00000524798 RAB4BP61018 213 aa12.88□□□□□ -0.35
LTBP3-203ENST00000524798 ELOBQ15370 118 aa12.88□□□□□ -0.35
LTBP3-203ENST00000524798 PRR27Q6MZM9 219 aa12.88□□□□□ -0.35
LTBP3-203ENST00000524798 ATRAIDQ6UW56 229 aa12.88□□□□□ -0.35
LTBP3-203ENST00000524798 BAGE2Q86Y30 109 aa12.88□□□□□ -0.35
LTBP3-203ENST00000524798 KLK12Q9UKR0 248 aa12.88□□□□□ -0.35
LTBP3-203ENST00000524798 SRRM2Q9UQ35 2752 aaKnown RBP12.87□□□□□ -0.35
LTBP3-203ENST00000524798 SNAI2O43623 268 aa12.87□□□□□ -0.35
LTBP3-203ENST00000524798 RPL19P84098 196 aaKnown RBP12.87□□□□□ -0.35
LTBP3-203ENST00000524798 Q8N976 141 aa12.87□□□□□ -0.35
LTBP3-203ENST00000524798 OR10AG1Q8NH19 301 aa12.87□□□□□ -0.35
LTBP3-203ENST00000524798 DNAJC30Q96LL9 226 aa12.87□□□□□ -0.35
LTBP3-203ENST00000524798 A0A087WX48 190 aa12.86□□□□□ -0.35
LTBP3-203ENST00000524798 BCL2L11O43521 198 aa12.86□□□□□ -0.35
LTBP3-203ENST00000524798 PFDN1O60925 122 aa12.86□□□□□ -0.35
LTBP3-203ENST00000524798 OR5AL1P0C617 328 aa12.86□□□□□ -0.35
LTBP3-203ENST00000524798 ZNF471Q9BX82 626 aaPredicted RBP12.86□□□□□ -0.35
LTBP3-203ENST00000524798 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.85□□□□□ -0.35
LTBP3-203ENST00000524798 IGKV2D-24A0A075B6R9 120 aa12.85□□□□□ -0.35
LTBP3-203ENST00000524798 TRBV6-8A0A0A6YYG3 113 aa12.85□□□□□ -0.35
LTBP3-203ENST00000524798 A0A1B0GV50 99 aa12.85□□□□□ -0.35
LTBP3-203ENST00000524798 H2AFB1P0C5Y9 115 aa12.85□□□□□ -0.35
LTBP3-203ENST00000524798 TMUB2Q71RG4 321 aa12.85□□□□□ -0.35
LTBP3-203ENST00000524798 NEXN-AS1Q8NBZ9 246 aa12.85□□□□□ -0.35
LTBP3-203ENST00000524798 UBE2WQ96B02 151 aa12.85□□□□□ -0.35
LTBP3-203ENST00000524798 KANTRA0A1W2PQU2 76 aa12.84□□□□□ -0.35
LTBP3-203ENST00000524798 EIF5AP63241 154 aaKnown RBP12.84□□□□□ -0.35
LTBP3-203ENST00000524798 Q0VG73 95 aa12.84□□□□□ -0.35
LTBP3-203ENST00000524798 KCNIP4Q6PIL6 250 aa12.84□□□□□ -0.35
LTBP3-203ENST00000524798 ZNF56Q15929 161 aa12.82□□□□□ -0.36
LTBP3-203ENST00000524798 DNAH8Q96JB1 4490 aa12.82□□□□□ -0.36
LTBP3-203ENST00000524798 HERC1Q15751 4861 aa12.82□□□□□ -0.36
LTBP3-203ENST00000524798 RBFOX3A6NFN3 312 aa12.81□□□□□ -0.36
LTBP3-203ENST00000524798 SPANXN1Q5VSR9 72 aa12.81□□□□□ -0.36
LTBP3-203ENST00000524798 C11orf52Q96A22 123 aa12.81□□□□□ -0.36
LTBP3-203ENST00000524798 KIF25-AS1Q9Y6Z4 181 aa12.81□□□□□ -0.36
LTBP3-203ENST00000524798 TRAV1-1A0A0B4J248 108 aa12.8□□□□□ -0.36
LTBP3-203ENST00000524798 TMEM262E9PQX1 116 aa12.8□□□□□ -0.36
LTBP3-203ENST00000524798 PLA2G1BP04054 148 aaKnown RBP12.8□□□□□ -0.36
LTBP3-203ENST00000524798 RPL35P42766 123 aaKnown RBP12.8□□□□□ -0.36
LTBP3-203ENST00000524798 ENHOQ6UWT2 76 aa12.8□□□□□ -0.36
LTBP3-203ENST00000524798 VAX2Q9UIW0 290 aa12.8□□□□□ -0.36
LTBP3-203ENST00000524798 MUC21A0A0G2JKD1 596 aa12.79□□□□□ -0.36
LTBP3-203ENST00000524798 MUC21A0A140T8X8 626 aa12.79□□□□□ -0.36
LTBP3-203ENST00000524798 CCL20P78556 96 aa12.79□□□□□ -0.36
LTBP3-203ENST00000524798 LINC01620Q4KN68 170 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms