RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 JMJD1CQ15652 2540 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 WNK2Q9Y3S1 2297 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 IGHV4OR15-8A0A075B7B6 117 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 A0A087WW49 117 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 TRAV8-2A0A0B4J237 113 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 A0A0J9YY99 117 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 C11orf86A6NJI1 115 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 RHODO00212 210 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 NXPH4O95158 308 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 IGHV3-30P01768 117 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 IGHV3-30-5P0DP03 117 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 PRTN3P24158 256 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 RPL13AP40429 203 aaKnown RBP3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 EFNA4P52798 201 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 SRSF9Q13242 221 aaKnown RBP eCLIP3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 MINOS1Q5TGZ0 78 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 C2orf66Q6UXQ4 117 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 SCGB1D4Q6XE38 83 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 C10orf126Q8N4M7 172 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 TEX29Q8N6K0 151 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 SLC25A29Q8N8R3 303 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 GLMPQ8WWB7 406 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 RASL10AQ92737 203 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 RNF183Q96D59 192 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 TIMD4Q96H15 378 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 TIMM17AQ99595 171 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 ANAPC13Q9BS18 74 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 SPANXDQ9BXN6 97 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 MINOS1-NBL1R4GNA1 71 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 NF1P21359 2839 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.77□□□□□ -1.812e-14■■■□□ 16.4
CTNNA1-241ENST00000524127 ARHGAP32A7KAX9 2087 aa3.77□□□□□ -1.81
CTNNA1-241ENST00000524127 TRAV21A0A0B4J279 112 aa3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 A0A0B4J2C4 111 aa3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 LOC107984156A0A0G2JMH3 177 aa3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 A0A0J9YX75 114 aa3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 E7EQL1 145 aa3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 RNF223E7ERA6 249 aa3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 OVOL1O14753 267 aa3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 TCL1BO95988 128 aa3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 SCGB1C2P0DMR2 95 aa3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 PPIFP30405 207 aaKnown RBP3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 NDPQ00604 133 aa3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 FHL3Q13643 280 aa3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 PMVKQ15126 192 aa3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 C9orf139Q6ZV77 190 aa3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 APRG1Q8IVJ8 170 aa3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 ARL17AQ8IVW1 177 aa3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 ANKRD29Q8N6D5 301 aa3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 LINC00477Q96M19 166 aa3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 PRO1854Q9UHT4 67 aa3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 UFC1Q9Y3C8 167 aa3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 PLXNB1O43157 2135 aa3.76□□□□□ -1.81
CTNNA1-241ENST00000524127 IGLV4-69A0A075B6H9 119 aa3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 TRBV7-1A0A0A6YYK4 115 aa3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 IGHV7-81A0A0B4J1V7 117 aa3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 TRAV26-2A0A0B4J265 109 aa3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 TRBV6-5A0A0K0K1A5 114 aa3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 CLPSL1A2RUU4 121 aa3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 IGIPA6NJ69 53 aa3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 SLC25A20O43772 301 aa3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 CFC1BP0CG36 223 aa3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 CFC1P0CG37 223 aa3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 GAGE2BQ13066 116 aa3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 GAGE2EQ4V326 116 aa3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 ZFP2Q6ZN57 461 aa3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 PLEKHB2Q96CS7 222 aa3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 AJUBAQ96IF1 538 aa3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 RAX2Q96IS3 184 aa3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 METTL26Q96S19 204 aa3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 AMELXQ99217 191 aa3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 ONECUT1Q9UBC0 465 aa3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 GAGE2DQ9UEU5 116 aa3.75□□□□□ -1.81
CTNNA1-241ENST00000524127 CMYA5Q8N3K9 4069 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 AGRNO00468 2067 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 FAM240AA0A1B0GVK7 77 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 GAGE12JA6NER3 117 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 SDHAF1A6NFY7 115 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 H3BVH4 76 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 VCYO14598 125 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 LEPROTO15243 131 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 GAGE7O76087 117 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 IGHV1-69P01742 117 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 IGHV3-33P01772 117 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 CRYGDP07320 174 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 CD3EP07766 207 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 NHLRC4P0CG21 123 aaPredicted RBP3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 GAGE12FP0CL80 117 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 GAGE12GP0CL81 117 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 GAGE12IP0CL82 117 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 POLR2KP53803 58 aaKnown RBP3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 NDUFV3P56181 108 aaKnown RBP3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 GAGE4Q13068 117 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 ATXN8Q156A1 80 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 ZNF876PQ49A33 203 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 DEFB121Q5J5C9 76 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 IGFL4Q6B9Z1 124 aa3.74□□□□□ -1.81
CTNNA1-241ENST00000524127 GPHB5Q86YW7 130 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms