RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 NAT8Q9UHE5 227 aa6.32□□□□□ -1.4
SDC2-207ENST00000522911 IGHV3-38A0A0C4DH36 116 aa6.31□□□□□ -1.4
SDC2-207ENST00000522911 A0A1B0GV50 99 aa6.31□□□□□ -1.4
SDC2-207ENST00000522911 MAP1LC3B2A6NCE7 125 aa6.31□□□□□ -1.4
SDC2-207ENST00000522911 ZNF727A8MUV8 499 aa6.31□□□□□ -1.4
SDC2-207ENST00000522911 IBA57-AS1B1ANH7 110 aa6.31□□□□□ -1.4
SDC2-207ENST00000522911 M0R2P5 195 aa6.31□□□□□ -1.4
SDC2-207ENST00000522911 LAGE3Q14657 143 aa6.31□□□□□ -1.4
SDC2-207ENST00000522911 TMEM241Q24JQ0 296 aa6.31□□□□□ -1.4
SDC2-207ENST00000522911 FAM159AQ6UWV7 190 aa6.31□□□□□ -1.4
SDC2-207ENST00000522911 ACTR3CQ9C0K3 210 aaPredicted RBP6.31□□□□□ -1.4
SDC2-207ENST00000522911 MAP1LC3BQ9GZQ8 125 aa6.31□□□□□ -1.4
SDC2-207ENST00000522911 FLG2Q5D862 2391 aaPredicted RBP6.3□□□□□ -1.4
SDC2-207ENST00000522911 CTXND1A0A1B0GTU2 59 aa6.3□□□□□ -1.4
SDC2-207ENST00000522911 DIRC3C9JPN6 131 aa6.3□□□□□ -1.4
SDC2-207ENST00000522911 GATA1P15976 413 aaPredicted RBP6.3□□□□□ -1.4
SDC2-207ENST00000522911 TMEM183BQ1AE95 376 aa6.3□□□□□ -1.4
SDC2-207ENST00000522911 ACOT6Q3I5F7 207 aaPredicted RBP6.3□□□□□ -1.4
SDC2-207ENST00000522911 KCNIP4Q6PIL6 250 aa6.3□□□□□ -1.4
SDC2-207ENST00000522911 Q6ZSN1 163 aa6.3□□□□□ -1.4
SDC2-207ENST00000522911 TMEM183AQ8IXX5 376 aa6.3□□□□□ -1.4
SDC2-207ENST00000522911 Q8TAT8 98 aa6.3□□□□□ -1.4
SDC2-207ENST00000522911 IGHV3-16A0A0C4DH30 117 aa6.29□□□□□ -1.4
SDC2-207ENST00000522911 LOC100996750A0A140TA64 210 aa6.29□□□□□ -1.4
SDC2-207ENST00000522911 TRBV6-4A0A1B0GX49 114 aa6.29□□□□□ -1.4
SDC2-207ENST00000522911 LINC00587B1AMM8 73 aa6.29□□□□□ -1.4
SDC2-207ENST00000522911 TSTD3H0UI37 97 aa6.29□□□□□ -1.4
SDC2-207ENST00000522911 PDE6DO43924 150 aa6.29□□□□□ -1.4
SDC2-207ENST00000522911 OR7C2O60412 319 aa6.29□□□□□ -1.4
SDC2-207ENST00000522911 PFN1P07737 140 aaKnown RBP6.29□□□□□ -1.4
SDC2-207ENST00000522911 OR10J4P0C629 311 aa6.29□□□□□ -1.4
SDC2-207ENST00000522911 FUSP35637 526 aaKnown RBP eCLIP6.29□□□□□ -1.45e-6■■□□□ 13.6
SDC2-207ENST00000522911 TAS2R45P59539 299 aa6.29□□□□□ -1.4
SDC2-207ENST00000522911 RANP62826 216 aaKnown RBP6.29□□□□□ -1.4
SDC2-207ENST00000522911 MEF2BQ02080 365 aaPredicted RBP6.29□□□□□ -1.4
SDC2-207ENST00000522911 MUC21Q5SSG8 566 aa6.29□□□□□ -1.4
SDC2-207ENST00000522911 Q6ZSA8 131 aa6.29□□□□□ -1.4
SDC2-207ENST00000522911 OR4C5Q8NGB2 326 aa6.29□□□□□ -1.4
SDC2-207ENST00000522911 PTH2Q96A98 100 aa6.29□□□□□ -1.4
SDC2-207ENST00000522911 KCNS1Q96KK3 526 aa6.29□□□□□ -1.4
SDC2-207ENST00000522911 IMMP2LQ96T52 175 aa6.29□□□□□ -1.4
SDC2-207ENST00000522911 KRTAP4-6Q9BYQ5 205 aa6.29□□□□□ -1.4
SDC2-207ENST00000522911 OTORQ9NRC9 128 aa6.29□□□□□ -1.4
SDC2-207ENST00000522911 IGLV5-52A0A0A0MRZ9 124 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 TGIF2-C20orf24A0A0A6YYL0 155 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 TRAV21A0A0B4J279 112 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 F6UZH7 168 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 HIST1H2BKO60814 126 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 TRGC2P03986 189 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 HIST1H2BJP06899 126 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 CXCL1P09341 107 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 HIST1H2BOP23527 126 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 HIST1H2BBP33778 126 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 HIST1H2BDP58876 126 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 PKIAP61925 76 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 HIST1H2BCP62807 126 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 UBE2L3P68036 154 aaKnown RBP6.28□□□□□ -1.4
SDC2-207ENST00000522911 HIST2H2BEQ16778 126 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 LBHQ53QV2 105 aaPredicted RBP6.28□□□□□ -1.4
SDC2-207ENST00000522911 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.28□□□□□ -1.4
SDC2-207ENST00000522911 HIST3H2BBQ8N257 126 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 Q8N814 137 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 HIST1H2BHQ93079 126 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 HIST1H2BNQ99877 126 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 HIST1H2BMQ99879 126 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 SMIM7Q9BQ49 75 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 URGCP-MRPS24S4R325 110 aa6.28□□□□□ -1.4
SDC2-207ENST00000522911 SERTM2A0A1B0GWG4 89 aa6.27□□□□□ -1.41
SDC2-207ENST00000522911 PSCAO43653 123 aa6.27□□□□□ -1.41
SDC2-207ENST00000522911 SMR3BP02814 79 aaPredicted RBP6.27□□□□□ -1.41
SDC2-207ENST00000522911 TRGC1P0CF51 173 aa6.27□□□□□ -1.41
SDC2-207ENST00000522911 RPL19P84098 196 aaKnown RBP6.27□□□□□ -1.41
SDC2-207ENST00000522911 COA6Q5JTJ3 125 aaKnown RBP6.27□□□□□ -1.41
SDC2-207ENST00000522911 PIK3CD-AS1Q5SR53 167 aa6.27□□□□□ -1.41
SDC2-207ENST00000522911 LELP1Q5T871 98 aa6.27□□□□□ -1.41
SDC2-207ENST00000522911 PQLC2Q6ZP29 291 aa6.27□□□□□ -1.41
SDC2-207ENST00000522911 OR10G9Q8NGN4 311 aa6.27□□□□□ -1.41
SDC2-207ENST00000522911 OR10G7Q8NGN6 311 aa6.27□□□□□ -1.41
SDC2-207ENST00000522911 OR10D4PQ8NGN7 298 aa6.27□□□□□ -1.41
SDC2-207ENST00000522911 TRAV8-6A0A0B4J262 113 aa6.26□□□□□ -1.41
SDC2-207ENST00000522911 FBLL1A6NHQ2 334 aaKnown RBP6.26□□□□□ -1.41
SDC2-207ENST00000522911 KRTAP29-1A8MX34 341 aaPredicted RBP6.26□□□□□ -1.41
SDC2-207ENST00000522911 GCGP01275 180 aa6.26□□□□□ -1.41
SDC2-207ENST00000522911 TYMSP04818 313 aa6.26□□□□□ -1.41
SDC2-207ENST00000522911 SSTP61278 116 aa6.26□□□□□ -1.41
SDC2-207ENST00000522911 RHOHQ15669 191 aa6.26□□□□□ -1.41
SDC2-207ENST00000522911 ADIRFQ15847 76 aa6.26□□□□□ -1.41
SDC2-207ENST00000522911 ZNF726P1Q15940 193 aa6.26□□□□□ -1.41
SDC2-207ENST00000522911 PYY3Q5JQD4 70 aa6.26□□□□□ -1.41
SDC2-207ENST00000522911 FFAR4Q5NUL3 377 aa6.26□□□□□ -1.41
SDC2-207ENST00000522911 SLC25A29Q8N8R3 303 aa6.26□□□□□ -1.41
SDC2-207ENST00000522911 PACRGQ96M98 296 aaPredicted RBP6.26□□□□□ -1.41
SDC2-207ENST00000522911 TM2D2Q9BX73 214 aa6.26□□□□□ -1.41
SDC2-207ENST00000522911 TRAV9-1A0A075B6T8 112 aa6.25□□□□□ -1.41
SDC2-207ENST00000522911 LOC100131303A0A0U1RQF7 123 aa6.25□□□□□ -1.41
SDC2-207ENST00000522911 A0A1W2PPV4 95 aa6.25□□□□□ -1.41
SDC2-207ENST00000522911 PGPA6NDG6 321 aa6.25□□□□□ -1.41
SDC2-207ENST00000522911 RS1O15537 224 aa6.25□□□□□ -1.41
SDC2-207ENST00000522911 GNRH2O43555 120 aa6.25□□□□□ -1.41
SDC2-207ENST00000522911 MGST1P10620 155 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms