RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 SMIM17P0DL12 118 aa11.19□□□□□ -0.62
CTNNA1-236ENST00000522792 KRTAP10-11P60412 298 aa11.19□□□□□ -0.62
CTNNA1-236ENST00000522792 NIT1Q86X76 327 aa11.19□□□□□ -0.62
CTNNA1-236ENST00000522792 URB1-AS1Q96HZ7 61 aa11.19□□□□□ -0.62
CTNNA1-236ENST00000522792 COL6A5A8TX70 2615 aa11.18□□□□□ -0.62
CTNNA1-236ENST00000522792 FAM74A4Q5TZK3 123 aa11.18□□□□□ -0.62
CTNNA1-236ENST00000522792 SAMD10Q9BYL1 202 aa11.18□□□□□ -0.62
CTNNA1-236ENST00000522792 KIF25-AS1Q9Y6Z4 181 aa11.18□□□□□ -0.62
CTNNA1-236ENST00000522792 CMYA5Q8N3K9 4069 aa11.18□□□□□ -0.62
CTNNA1-236ENST00000522792 PPBPP02775 128 aa11.18□□□□□ -0.62
CTNNA1-236ENST00000522792 PMCHP20382 165 aa11.18□□□□□ -0.62
CTNNA1-236ENST00000522792 MDFIQ99750 246 aa11.18□□□□□ -0.62
CTNNA1-236ENST00000522792 MRPL16Q9NX20 251 aaKnown RBP11.18□□□□□ -0.62
CTNNA1-236ENST00000522792 M0R2P5 195 aa11.17□□□□□ -0.62
CTNNA1-236ENST00000522792 ESDP10768 282 aa11.17□□□□□ -0.62
CTNNA1-236ENST00000522792 OR10D4PQ8NGN7 298 aa11.17□□□□□ -0.62
CTNNA1-236ENST00000522792 RNASE8Q8TDE3 154 aaKnown RBP11.17□□□□□ -0.62
CTNNA1-236ENST00000522792 TNFRSF6BO95407 300 aa11.16□□□□□ -0.62
CTNNA1-236ENST00000522792 LINC00315P59091 139 aa11.16□□□□□ -0.62
CTNNA1-236ENST00000522792 ZNF705AQ6ZN79 300 aaPredicted RBP11.16□□□□□ -0.62
CTNNA1-236ENST00000522792 FAM19A2Q8N3H0 131 aa11.16□□□□□ -0.62
CTNNA1-236ENST00000522792 TMEM18Q96B42 140 aa11.16□□□□□ -0.62
CTNNA1-236ENST00000522792 PACRGQ96M98 296 aaPredicted RBP11.16□□□□□ -0.62
CTNNA1-236ENST00000522792 G3V4G9 280 aa11.16□□□□□ -0.62
CTNNA1-236ENST00000522792 IFI27P40305 119 aaPredicted RBP11.16□□□□□ -0.62
CTNNA1-236ENST00000522792 CDPF1Q6NVV7 123 aa11.16□□□□□ -0.62
CTNNA1-236ENST00000522792 PRSS3P2Q8NHM4 247 aa11.16□□□□□ -0.62
CTNNA1-236ENST00000522792 TMEM263Q8WUH6 116 aaKnown RBP11.16□□□□□ -0.62
CTNNA1-236ENST00000522792 MRAP2Q96G30 205 aa11.16□□□□□ -0.62
CTNNA1-236ENST00000522792 F5H697 171 aa11.15□□□□□ -0.62
CTNNA1-236ENST00000522792 HSBP1O75506 76 aa11.15□□□□□ -0.62
CTNNA1-236ENST00000522792 CRYGDP07320 174 aa11.15□□□□□ -0.62
CTNNA1-236ENST00000522792 IGHV4-30-4P0DP06 118 aa11.15□□□□□ -0.62
CTNNA1-236ENST00000522792 PMCHL1Q16048 86 aa11.15□□□□□ -0.62
CTNNA1-236ENST00000522792 NRACQ8N912 160 aa11.15□□□□□ -0.62
CTNNA1-236ENST00000522792 LINC00614P0C842 121 aa11.14□□□□□ -0.63
CTNNA1-236ENST00000522792 AMTP48728 403 aa11.14□□□□□ -0.63
CTNNA1-236ENST00000522792 IL17DQ8TAD2 202 aa11.14□□□□□ -0.63
CTNNA1-236ENST00000522792 SPXQ9BT56 116 aa11.14□□□□□ -0.63
CTNNA1-236ENST00000522792 MAP1LC3AQ9H492 121 aa11.14□□□□□ -0.63
CTNNA1-236ENST00000522792 IGHV3-73A0A0B4J1V6 119 aa11.14□□□□□ -0.63
CTNNA1-236ENST00000522792 EGFEM1PQ0D2K5 195 aa11.14□□□□□ -0.63
CTNNA1-236ENST00000522792 ZNF56Q15929 161 aa11.14□□□□□ -0.63
CTNNA1-236ENST00000522792 RRN3P1Q2M238 152 aa11.14□□□□□ -0.63
CTNNA1-236ENST00000522792 SUMO4Q6EEV6 95 aa11.14□□□□□ -0.63
CTNNA1-236ENST00000522792 RPL39LQ96EH5 51 aaKnown RBP11.14□□□□□ -0.63
CTNNA1-236ENST00000522792 DEFA6Q01524 100 aa11.13□□□□□ -0.63
CTNNA1-236ENST00000522792 FA2HQ7L5A8 372 aa11.13□□□□□ -0.63
CTNNA1-236ENST00000522792 POM121L12Q8N7R1 296 aa11.13□□□□□ -0.63
CTNNA1-236ENST00000522792 RASL10AQ92737 203 aa11.13□□□□□ -0.63
CTNNA1-236ENST00000522792 C16orf74Q96GX8 76 aa11.13□□□□□ -0.63
CTNNA1-236ENST00000522792 LAMTOR2Q9Y2Q5 125 aa11.13□□□□□ -0.63
CTNNA1-236ENST00000522792 TRGV1A0A0A0MS02 117 aa11.13□□□□□ -0.63
CTNNA1-236ENST00000522792 APOC4P55056 127 aa11.13□□□□□ -0.63
CTNNA1-236ENST00000522792 CHCHD1Q96BP2 118 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-236ENST00000522792 NOP10Q9NPE3 64 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-236ENST00000522792 ANK2Q01484 3957 aa11.12□□□□□ -0.63
CTNNA1-236ENST00000522792 KIR2DL5BA0A0G2JN68 375 aa11.12□□□□□ -0.63
CTNNA1-236ENST00000522792 KIR2DL5BA0A0G2JPC4 375 aa11.12□□□□□ -0.63
CTNNA1-236ENST00000522792 PLAC8L1A1L4L8 177 aa11.12□□□□□ -0.63
CTNNA1-236ENST00000522792 DEFB135Q30KP9 77 aa11.12□□□□□ -0.63
CTNNA1-236ENST00000522792 KIR2DL5AQ8N109 375 aa11.12□□□□□ -0.63
CTNNA1-236ENST00000522792 KIR2DL5BQ8NHK3 375 aa11.12□□□□□ -0.63
CTNNA1-236ENST00000522792 A8MWV9 139 aa11.11□□□□□ -0.63
CTNNA1-236ENST00000522792 PTH2Q96A98 100 aa11.11□□□□□ -0.63
CTNNA1-236ENST00000522792 PKD1L1Q8TDX9 2849 aa11.11□□□□□ -0.63
CTNNA1-236ENST00000522792 IGHV1-24A0A0C4DH33 117 aa11.11□□□□□ -0.63
CTNNA1-236ENST00000522792 EMP1P54849 157 aa11.11□□□□□ -0.63
CTNNA1-236ENST00000522792 CFAP126Q5VTH2 177 aa11.11□□□□□ -0.63
CTNNA1-236ENST00000522792 Q6ZTI0 123 aa11.11□□□□□ -0.63
CTNNA1-236ENST00000522792 C14orf144Q96I85 54 aa11.11□□□□□ -0.63
CTNNA1-236ENST00000522792 AP5S1Q9NUS5 200 aa11.11□□□□□ -0.63
CTNNA1-236ENST00000522792 PIK3CD-AS1Q5SR53 167 aa11.09□□□□□ -0.63
CTNNA1-236ENST00000522792 X6R8D5 127 aa11.09□□□□□ -0.63
CTNNA1-236ENST00000522792 SAMD5Q5TGI4 173 aa11.09□□□□□ -0.63
CTNNA1-236ENST00000522792 Q6ZWC4 215 aa11.09□□□□□ -0.63
CTNNA1-236ENST00000522792 DAZ2Q13117 558 aaKnown RBP11.08□□□□□ -0.64
CTNNA1-236ENST00000522792 UFSP1Q6NVU6 142 aa11.08□□□□□ -0.64
CTNNA1-236ENST00000522792 M0QY20 66 aa11.08□□□□□ -0.64
CTNNA1-236ENST00000522792 RS1O15537 224 aa11.08□□□□□ -0.64
CTNNA1-236ENST00000522792 SUMO2P61956 95 aaKnown RBP11.08□□□□□ -0.64
CTNNA1-236ENST00000522792 Q8N8P6 123 aa11.08□□□□□ -0.64
CTNNA1-236ENST00000522792 NXT2Q9NPJ8 142 aaKnown RBP11.08□□□□□ -0.64
CTNNA1-236ENST00000522792 IGLV2-18A0A075B6J9 118 aa11.07□□□□□ -0.64
CTNNA1-236ENST00000522792 GAGE12BA1L429 117 aa11.07□□□□□ -0.64
CTNNA1-236ENST00000522792 GAGE7O76087 117 aa11.07□□□□□ -0.64
CTNNA1-236ENST00000522792 IGHV3-53P01767 116 aa11.07□□□□□ -0.64
CTNNA1-236ENST00000522792 GAGE12FP0CL80 117 aa11.07□□□□□ -0.64
CTNNA1-236ENST00000522792 GAGE12GP0CL81 117 aa11.07□□□□□ -0.64
CTNNA1-236ENST00000522792 GAGE12IP0CL82 117 aa11.07□□□□□ -0.64
CTNNA1-236ENST00000522792 PKIAP61925 76 aa11.07□□□□□ -0.64
CTNNA1-236ENST00000522792 Q6ZSN1 163 aa11.07□□□□□ -0.64
CTNNA1-236ENST00000522792 SMIM2Q9BVW6 85 aa11.07□□□□□ -0.64
CTNNA1-236ENST00000522792 TCAPO15273 167 aa11.06□□□□□ -0.64
CTNNA1-236ENST00000522792 LGALS9BQ3B8N2 356 aa11.06□□□□□ -0.64
CTNNA1-236ENST00000522792 NEGR1Q7Z3B1 354 aa11.06□□□□□ -0.64
CTNNA1-236ENST00000522792 OR4C5Q8NGB2 326 aa11.06□□□□□ -0.64
CTNNA1-236ENST00000522792 C20orf78Q9BR46 151 aa11.06□□□□□ -0.64
CTNNA1-236ENST00000522792 PRSS47A8MTI9 375 aa11.06□□□□□ -0.64
CTNNA1-236ENST00000522792 PPP1R17O96001 155 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms