RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 HIST2H2BCQ6DN03 193 aa9.45□□□□□ -0.9
ERGIC1-208ENST00000520399 UPK3BQ9BT76 320 aa9.45□□□□□ -0.9
ERGIC1-208ENST00000520399 SND1-IT1Q9HBX3 110 aa9.45□□□□□ -0.9
ERGIC1-208ENST00000520399 NDUFC1O43677 76 aa9.44□□□□□ -0.9
ERGIC1-208ENST00000520399 FGF23Q9GZV9 251 aaPredicted RBP9.44□□□□□ -0.9
ERGIC1-208ENST00000520399 J3QKU1 62 aa9.44□□□□□ -0.9
ERGIC1-208ENST00000520399 SPART-AS1P0CW21 52 aa9.44□□□□□ -0.9
ERGIC1-208ENST00000520399 SEM1Q6ZVN7 128 aa9.44□□□□□ -0.9
ERGIC1-208ENST00000520399 C5orf38Q86SI9 138 aa9.44□□□□□ -0.9
ERGIC1-208ENST00000520399 C20orf197Q8N268 126 aa9.44□□□□□ -0.9
ERGIC1-208ENST00000520399 K7EQD1 137 aa9.44□□□□□ -0.9
ERGIC1-208ENST00000520399 WT1P19544 449 aaPredicted RBP9.44□□□□□ -0.9
ERGIC1-208ENST00000520399 Q6ZSR3 168 aa9.44□□□□□ -0.9
ERGIC1-208ENST00000520399 ZNF491Q8N8L2 437 aa9.44□□□□□ -0.9
ERGIC1-208ENST00000520399 DIRC1Q969H9 104 aa9.43□□□□□ -0.9
ERGIC1-208ENST00000520399 PPDPFQ9H3Y8 114 aa9.43□□□□□ -0.9
ERGIC1-208ENST00000520399 TMEM61Q8N0U2 210 aa9.43□□□□□ -0.9
ERGIC1-208ENST00000520399 TCL1BO95988 128 aa9.43□□□□□ -0.9
ERGIC1-208ENST00000520399 MRPS36P82909 103 aaKnown RBP9.43□□□□□ -0.9
ERGIC1-208ENST00000520399 MPDZO75970 2070 aa9.43□□□□□ -0.9
ERGIC1-208ENST00000520399 GYPEP15421 78 aa9.42□□□□□ -0.9
ERGIC1-208ENST00000520399 UFSP1Q6NVU6 142 aa9.42□□□□□ -0.9
ERGIC1-208ENST00000520399 RBAKDNA6NC62 111 aa9.42□□□□□ -0.9
ERGIC1-208ENST00000520399 GRNP28799 593 aaKnown RBP9.42□□□□□ -0.9
ERGIC1-208ENST00000520399 NPBQ8NG41 125 aa9.42□□□□□ -0.9
ERGIC1-208ENST00000520399 IGHV4OR15-8A0A075B7B6 117 aa9.42□□□□□ -0.9
ERGIC1-208ENST00000520399 A0A087WW49 117 aa9.42□□□□□ -0.9
ERGIC1-208ENST00000520399 TIMM17BO60830 172 aa9.42□□□□□ -0.9
ERGIC1-208ENST00000520399 SERP1Q9Y6X1 66 aa9.42□□□□□ -0.9
ERGIC1-208ENST00000520399 LINC00526Q96FQ7 95 aa9.41□□□□□ -0.9
ERGIC1-208ENST00000520399 PDE6GP18545 87 aa9.41□□□□□ -0.9
ERGIC1-208ENST00000520399 IL17DQ8TAD2 202 aa9.41□□□□□ -0.9
ERGIC1-208ENST00000520399 DEFB112Q30KQ8 113 aa9.41□□□□□ -0.9
ERGIC1-208ENST00000520399 ASPHD1Q5U4P2 390 aa9.41□□□□□ -0.9
ERGIC1-208ENST00000520399 SVILO95425 2214 aa9.41□□□□□ -0.9
ERGIC1-208ENST00000520399 DAZ2Q13117 558 aaKnown RBP9.4□□□□□ -0.9
ERGIC1-208ENST00000520399 DAZ4Q86SG3 579 aaKnown RBP9.4□□□□□ -0.9
ERGIC1-208ENST00000520399 DAZ3Q9NR90 486 aaKnown RBP9.4□□□□□ -0.9
ERGIC1-208ENST00000520399 C14orf177Q52M58 125 aa9.4□□□□□ -0.9
ERGIC1-208ENST00000520399 LRRK1Q38SD2 2015 aa9.4□□□□□ -0.91
ERGIC1-208ENST00000520399 IGLV10-54A0A075B6I4 117 aa9.4□□□□□ -0.91
ERGIC1-208ENST00000520399 ATP5EP2Q5VTU8 51 aa9.4□□□□□ -0.91
ERGIC1-208ENST00000520399 RP1P56715 2156 aa9.39□□□□□ -0.91
ERGIC1-208ENST00000520399 NDUFA11Q86Y39 141 aa9.39□□□□□ -0.91
ERGIC1-208ENST00000520399 KIF26AQ9ULI4 1882 aaPredicted RBP9.39□□□□□ -0.91
ERGIC1-208ENST00000520399 TMEM256-PLSCR3K7ERE1 68 aa9.38□□□□□ -0.91
ERGIC1-208ENST00000520399 LGALS9O00182 355 aa9.38□□□□□ -0.91
ERGIC1-208ENST00000520399 PHF3Q92576 2039 aaKnown RBP9.38□□□□□ -0.91
ERGIC1-208ENST00000520399 DENND4CQ5VZ89 1909 aa9.38□□□□□ -0.91
ERGIC1-208ENST00000520399 IGHV4-59P01825 116 aa9.38□□□□□ -0.91
ERGIC1-208ENST00000520399 PRORYQ9H606 182 aa9.38□□□□□ -0.91
ERGIC1-208ENST00000520399 CFAP126Q5VTH2 177 aa9.38□□□□□ -0.91
ERGIC1-208ENST00000520399 COX7BP24311 80 aa9.37□□□□□ -0.91
ERGIC1-208ENST00000520399 MLST8Q9BVC4 326 aa9.37□□□□□ -0.91
ERGIC1-208ENST00000520399 ALPK2Q86TB3 2170 aa9.37□□□□□ -0.91
ERGIC1-208ENST00000520399 I3L2K1 104 aa9.37□□□□□ -0.91
ERGIC1-208ENST00000520399 RITA1Q96K30 269 aa9.37□□□□□ -0.91
ERGIC1-208ENST00000520399 CCL24O00175 119 aa9.37□□□□□ -0.91
ERGIC1-208ENST00000520399 GP9P14770 177 aa9.36□□□□□ -0.91
ERGIC1-208ENST00000520399 DEFB113Q30KQ7 82 aa9.36□□□□□ -0.91
ERGIC1-208ENST00000520399 TEX49A0A1B0GTD5 131 aa9.36□□□□□ -0.91
ERGIC1-208ENST00000520399 SDK2Q58EX2 2172 aa9.36□□□□□ -0.91
ERGIC1-208ENST00000520399 BPY2O14599 106 aa9.36□□□□□ -0.91
ERGIC1-208ENST00000520399 GNRH2O43555 120 aa9.36□□□□□ -0.91
ERGIC1-208ENST00000520399 YLPM1P49750 1951 aaKnown RBP9.36□□□□□ -0.91
ERGIC1-208ENST00000520399 AGPAT4-IT1Q9H0P7 198 aa9.35□□□□□ -0.91
ERGIC1-208ENST00000520399 LENEPQ9Y5L5 61 aa9.35□□□□□ -0.91
ERGIC1-208ENST00000520399 TRIOBPQ9H2D6 2365 aa9.35□□□□□ -0.91
ERGIC1-208ENST00000520399 IGHV7-81A0A0B4J1V7 117 aa9.35□□□□□ -0.91
ERGIC1-208ENST00000520399 LTBP2Q14767 1821 aa9.35□□□□□ -0.91
ERGIC1-208ENST00000520399 MAP1BP46821 2468 aaKnown RBP9.34□□□□□ -0.91
ERGIC1-208ENST00000520399 IGHV4-61A0A0C4DH41 118 aa9.34□□□□□ -0.91
ERGIC1-208ENST00000520399 IGHV4-38-2P0DP08 117 aa9.34□□□□□ -0.91
ERGIC1-208ENST00000520399 LECT2O14960 151 aa9.34□□□□□ -0.91
ERGIC1-208ENST00000520399 ADORA2A-AS1P86434 159 aa9.34□□□□□ -0.91
ERGIC1-208ENST00000520399 IGLV11-55A0A075B6I3 123 aa9.34□□□□□ -0.91
ERGIC1-208ENST00000520399 TTTY13Q9BZ97 58 aa9.34□□□□□ -0.91
ERGIC1-208ENST00000520399 LYPD6Q86Y78 171 aa9.34□□□□□ -0.91
ERGIC1-208ENST00000520399 NOTCH4Q99466 2003 aa9.33□□□□□ -0.92
ERGIC1-208ENST00000520399 IGHV4-30-2A0A087WSY4 118 aa9.33□□□□□ -0.92
ERGIC1-208ENST00000520399 PMAIP1Q13794 54 aa9.33□□□□□ -0.92
ERGIC1-208ENST00000520399 TRAV23DV6A0A075B6W5 121 aa9.33□□□□□ -0.92
ERGIC1-208ENST00000520399 K7EIM0 57 aa9.33□□□□□ -0.92
ERGIC1-208ENST00000520399 RPS28P62857 69 aaKnown RBP9.33□□□□□ -0.92
ERGIC1-208ENST00000520399 F8WDY8 70 aa9.33□□□□□ -0.92
ERGIC1-208ENST00000520399 SPAG11BQ08648 103 aa9.33□□□□□ -0.92
ERGIC1-208ENST00000520399 COL4A3Q01955 1670 aa9.32□□□□□ -0.92
ERGIC1-208ENST00000520399 SPRY4Q9C004 299 aa9.32□□□□□ -0.92
ERGIC1-208ENST00000520399 FER1L5A0AVI2 2057 aa9.32□□□□□ -0.92
ERGIC1-208ENST00000520399 OBSL1O75147 1896 aa9.32□□□□□ -0.92
ERGIC1-208ENST00000520399 P0DMU3 169 aa9.32□□□□□ -0.92
ERGIC1-208ENST00000520399 FAM231AP0DMU4 169 aa9.32□□□□□ -0.92
ERGIC1-208ENST00000520399 FAM231CP0DMU5 169 aa9.32□□□□□ -0.92
ERGIC1-208ENST00000520399 HEATR5AQ86XA9 2040 aa9.32□□□□□ -0.92
ERGIC1-208ENST00000520399 A0A1W2PNU3 283 aaPredicted RBP9.31□□□□□ -0.92
ERGIC1-208ENST00000520399 LRCOL1A6NCL2 159 aa9.31□□□□□ -0.92
ERGIC1-208ENST00000520399 AHCTF1Q8WYP5 2266 aa9.31□□□□□ -0.92
ERGIC1-208ENST00000520399 SLURP1P55000 103 aa9.31□□□□□ -0.92
ERGIC1-208ENST00000520399 DEFB136Q30KP8 78 aa9.31□□□□□ -0.92
ERGIC1-208ENST00000520399 LOC107984640A0A0U1RRK4 108 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms