RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 Q9UF83 564 aa4.75□□□□□ -1.65
SDCBP-208ENST00000520228 TIMM8BQ9Y5J9 83 aaPredicted RBP4.75□□□□□ -1.65
SDCBP-208ENST00000520228 FAM168BA1KXE4 195 aa4.74□□□□□ -1.65
SDCBP-208ENST00000520228 PLAC8L1A1L4L8 177 aa4.74□□□□□ -1.65
SDCBP-208ENST00000520228 UMAD1C9J7I0 102 aa4.74□□□□□ -1.65
SDCBP-208ENST00000520228 ZNF324O75467 553 aaPredicted RBP4.74□□□□□ -1.65
SDCBP-208ENST00000520228 LY6G6CO95867 125 aa4.74□□□□□ -1.65
SDCBP-208ENST00000520228 SEC11BP0C7V7 166 aa4.74□□□□□ -1.65
SDCBP-208ENST00000520228 HTN3P15516 51 aa4.74□□□□□ -1.65
SDCBP-208ENST00000520228 TCTAP57738 103 aa4.74□□□□□ -1.65
SDCBP-208ENST00000520228 GNG5P63218 68 aa4.74□□□□□ -1.65
SDCBP-208ENST00000520228 PRR9Q5T870 116 aa4.74□□□□□ -1.65
SDCBP-208ENST00000520228 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.74□□□□□ -1.65
SDCBP-208ENST00000520228 AKAP14Q86UN6 197 aa4.74□□□□□ -1.65
SDCBP-208ENST00000520228 C5orf17Q8NAS9 161 aa4.74□□□□□ -1.65
SDCBP-208ENST00000520228 STOML3Q8TAV4 291 aa4.74□□□□□ -1.65
SDCBP-208ENST00000520228 LINC00467Q9BRT7 94 aa4.74□□□□□ -1.65
SDCBP-208ENST00000520228 NOP10Q9NPE3 64 aaKnown RBP4.74□□□□□ -1.65
SDCBP-208ENST00000520228 LENEPQ9Y5L5 61 aa4.74□□□□□ -1.65
SDCBP-208ENST00000520228 TRAV8-1A0A0A6YYK1 113 aa4.73□□□□□ -1.65
SDCBP-208ENST00000520228 SERTM2A0A1B0GWG4 89 aa4.73□□□□□ -1.65
SDCBP-208ENST00000520228 A0A1W2PRE2 83 aa4.73□□□□□ -1.65
SDCBP-208ENST00000520228 MAP1LC3B2A6NCE7 125 aa4.73□□□□□ -1.65
SDCBP-208ENST00000520228 GGTLC3B5MD39 225 aa4.73□□□□□ -1.65
SDCBP-208ENST00000520228 K7EQM0 130 aa4.73□□□□□ -1.65
SDCBP-208ENST00000520228 IFNA7P01567 189 aa4.73□□□□□ -1.65
SDCBP-208ENST00000520228 C1QBP02746 253 aa4.73□□□□□ -1.65
SDCBP-208ENST00000520228 TCRAP04437 139 aa4.73□□□□□ -1.65
SDCBP-208ENST00000520228 TPT1P13693 172 aaKnown RBP4.73□□□□□ -1.65
SDCBP-208ENST00000520228 FGF8P55075 233 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-208ENST00000520228 CXCL6P80162 114 aa4.73□□□□□ -1.65
SDCBP-208ENST00000520228 LGALSLQ3ZCW2 172 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-208ENST00000520228 EIF4E3Q8N5X7 224 aaKnown RBP4.73□□□□□ -1.65
SDCBP-208ENST00000520228 ZNF680Q8NEM1 530 aa4.73□□□□□ -1.65
SDCBP-208ENST00000520228 FAM213BQ8TBF2 198 aa4.73□□□□□ -1.65
SDCBP-208ENST00000520228 SFT2D1Q8WV19 159 aa4.73□□□□□ -1.65
SDCBP-208ENST00000520228 FAM210BQ96KR6 192 aa4.73□□□□□ -1.65
SDCBP-208ENST00000520228 MAP1LC3BQ9GZQ8 125 aa4.73□□□□□ -1.65
SDCBP-208ENST00000520228 APLNQ9ULZ1 77 aa4.73□□□□□ -1.65
SDCBP-208ENST00000520228 EPDR1Q9UM22 224 aa4.73□□□□□ -1.65
SDCBP-208ENST00000520228 IGHV1OR15-1A0A075B7D0 117 aa4.72□□□□□ -1.65
SDCBP-208ENST00000520228 UBE2G2P60604 165 aa4.72□□□□□ -1.65
SDCBP-208ENST00000520228 DAZ2Q13117 558 aaKnown RBP4.72□□□□□ -1.65
SDCBP-208ENST00000520228 LGALS9CQ6DKI2 356 aa4.72□□□□□ -1.65
SDCBP-208ENST00000520228 EIF5AL1Q6IS14 154 aaKnown RBP4.72□□□□□ -1.65
SDCBP-208ENST00000520228 DPPA3Q6W0C5 159 aa4.72□□□□□ -1.65
SDCBP-208ENST00000520228 Q6ZQT7 251 aa4.72□□□□□ -1.65
SDCBP-208ENST00000520228 CYB561D1Q8N8Q1 229 aa4.72□□□□□ -1.65
SDCBP-208ENST00000520228 TVP23CQ96ET8 276 aa4.72□□□□□ -1.65
SDCBP-208ENST00000520228 NDFIP1Q9BT67 221 aa4.72□□□□□ -1.65
SDCBP-208ENST00000520228 NKX6-2Q9C056 277 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-208ENST00000520228 TREM1Q9NP99 234 aa4.72□□□□□ -1.65
SDCBP-208ENST00000520228 PSG8Q9UQ74 426 aa4.72□□□□□ -1.65
SDCBP-208ENST00000520228 TRAV21A0A0B4J279 112 aa4.71□□□□□ -1.66
SDCBP-208ENST00000520228 FBLL1A6NHQ2 334 aaKnown RBP4.71□□□□□ -1.66
SDCBP-208ENST00000520228 FAM74A7A6NL05 159 aa4.71□□□□□ -1.66
SDCBP-208ENST00000520228 F5H768 121 aa4.71□□□□□ -1.66
SDCBP-208ENST00000520228 F6UZH7 168 aa4.71□□□□□ -1.66
SDCBP-208ENST00000520228 ATP5G1P05496 136 aa4.71□□□□□ -1.66
SDCBP-208ENST00000520228 ATP5G3P48201 142 aa4.71□□□□□ -1.66
SDCBP-208ENST00000520228 PPT1P50897 306 aa4.71□□□□□ -1.66
SDCBP-208ENST00000520228 FLI1Q01543 452 aaPredicted RBP4.71□□□□□ -1.66
SDCBP-208ENST00000520228 SAPCD1Q5SSQ6 148 aa4.71□□□□□ -1.66
SDCBP-208ENST00000520228 IBA57Q5T440 356 aaKnown RBP4.71□□□□□ -1.66
SDCBP-208ENST00000520228 Q6AWC8 147 aa4.71□□□□□ -1.66
SDCBP-208ENST00000520228 PRNTQ86SH4 94 aa4.71□□□□□ -1.66
SDCBP-208ENST00000520228 C11orf72Q8NBR9 251 aa4.71□□□□□ -1.66
SDCBP-208ENST00000520228 MBD3L1Q8WWY6 194 aa4.71□□□□□ -1.66
SDCBP-208ENST00000520228 NAGKQ9UJ70 344 aa4.71□□□□□ -1.66
SDCBP-208ENST00000520228 KLF12Q9Y4X4 402 aa4.71□□□□□ -1.66
SDCBP-208ENST00000520228 STARD9Q9P2P6 4700 aa4.71□□□□□ -1.66
SDCBP-208ENST00000520228 DYNC2H1Q8NCM8 4307 aaKnown RBP4.71□□□□□ -1.66
SDCBP-208ENST00000520228 TRGV2A0A075B6R0 118 aa4.7□□□□□ -1.66
SDCBP-208ENST00000520228 TRGV1A0A0A0MS02 117 aa4.7□□□□□ -1.66
SDCBP-208ENST00000520228 A0A1B0GV50 99 aa4.7□□□□□ -1.66
SDCBP-208ENST00000520228 PEX7O00628 323 aa4.7□□□□□ -1.66
SDCBP-208ENST00000520228 RAB5CP51148 216 aa4.7□□□□□ -1.66
SDCBP-208ENST00000520228 TCL1AP56279 114 aa4.7□□□□□ -1.66
SDCBP-208ENST00000520228 TMEM183BQ1AE95 376 aa4.7□□□□□ -1.66
SDCBP-208ENST00000520228 RNF212Q495C1 297 aa4.7□□□□□ -1.66
SDCBP-208ENST00000520228 Q6ZTI0 123 aa4.7□□□□□ -1.66
SDCBP-208ENST00000520228 SLC51BQ86UW2 128 aa4.7□□□□□ -1.66
SDCBP-208ENST00000520228 TMEM183AQ8IXX5 376 aa4.7□□□□□ -1.66
SDCBP-208ENST00000520228 TMEM75Q8N9X5 138 aa4.7□□□□□ -1.66
SDCBP-208ENST00000520228 HIST1H2BAQ96A08 127 aa4.7□□□□□ -1.66
SDCBP-208ENST00000520228 TCEAL7Q9BRU2 100 aa4.7□□□□□ -1.66
SDCBP-208ENST00000520228 A0A1B0GVG6 124 aa4.69□□□□□ -1.66
SDCBP-208ENST00000520228 KRTAP9-6A8MVA2 160 aa4.69□□□□□ -1.66
SDCBP-208ENST00000520228 GNRH2O43555 120 aa4.69□□□□□ -1.66
SDCBP-208ENST00000520228 SPINK4O60575 86 aa4.69□□□□□ -1.66
SDCBP-208ENST00000520228 GCGP01275 180 aa4.69□□□□□ -1.66
SDCBP-208ENST00000520228 OR5I1Q13606 314 aa4.69□□□□□ -1.66
SDCBP-208ENST00000520228 LGALS9BQ3B8N2 356 aa4.69□□□□□ -1.66
SDCBP-208ENST00000520228 TDRG1Q3Y452 100 aa4.69□□□□□ -1.66
SDCBP-208ENST00000520228 SMUG1Q53HV7 270 aa4.69□□□□□ -1.66
SDCBP-208ENST00000520228 C9orf62Q8N4C0 152 aa4.69□□□□□ -1.66
SDCBP-208ENST00000520228 KCNS1Q96KK3 526 aa4.69□□□□□ -1.66
SDCBP-208ENST00000520228 ARL2-SNX15V9GYD0 113 aa4.69□□□□□ -1.66
SDCBP-208ENST00000520228 TRAV1-1A0A0B4J248 108 aa4.68□□□□□ -1.66
SDCBP-208ENST00000520228 TEX46H3BTG2 121 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms