RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 TMEM269A0A1B0GVZ9 245 aa1.62□□□□□ -2.15
CPNE3-204ENST00000517862 TMEM14DPA8MWL7 114 aa1.62□□□□□ -2.15
CPNE3-204ENST00000517862 PLA2G10O15496 165 aa1.62□□□□□ -2.15
CPNE3-204ENST00000517862 TTRP02766 147 aa1.62□□□□□ -2.15
CPNE3-204ENST00000517862 CD5P06127 495 aa1.62□□□□□ -2.15
CPNE3-204ENST00000517862 ASAH2BP0C7U1 165 aa1.62□□□□□ -2.15
CPNE3-204ENST00000517862 RPL5P46777 297 aaKnown RBP1.62□□□□□ -2.15
CPNE3-204ENST00000517862 RPL30P62888 115 aaKnown RBP1.62□□□□□ -2.15
CPNE3-204ENST00000517862 TMEM97Q5BJF2 176 aa1.62□□□□□ -2.15
CPNE3-204ENST00000517862 LPCAT3Q6P1A2 487 aa1.62□□□□□ -2.15
CPNE3-204ENST00000517862 ZNF322Q6U7Q0 402 aaPredicted RBP1.62□□□□□ -2.15
CPNE3-204ENST00000517862 LINC00311Q8N616 119 aa1.62□□□□□ -2.15
CPNE3-204ENST00000517862 ANKRD29Q8N6D5 301 aa1.62□□□□□ -2.15
CPNE3-204ENST00000517862 OR2D3Q8NGH3 330 aa1.62□□□□□ -2.15
CPNE3-204ENST00000517862 OR10D4PQ8NGN7 298 aa1.62□□□□□ -2.15
CPNE3-204ENST00000517862 AP3S1Q92572 193 aa1.62□□□□□ -2.15
CPNE3-204ENST00000517862 CPNE2Q96FN4 548 aaPredicted RBP1.62□□□□□ -2.15
CPNE3-204ENST00000517862 ERMAPQ96PL5 475 aaPredicted RBP1.62□□□□□ -2.15
CPNE3-204ENST00000517862 TTTY13Q9BZ97 58 aa1.62□□□□□ -2.15
CPNE3-204ENST00000517862 NKX6-2Q9C056 277 aaPredicted RBP1.62□□□□□ -2.15
CPNE3-204ENST00000517862 DUSP21Q9H596 190 aa1.62□□□□□ -2.15
CPNE3-204ENST00000517862 UQCC1Q9NVA1 299 aa1.62□□□□□ -2.15
CPNE3-204ENST00000517862 DOK5Q9P104 306 aa1.62□□□□□ -2.15
CPNE3-204ENST00000517862 SMPXQ9UHP9 88 aa1.62□□□□□ -2.15
CPNE3-204ENST00000517862 FAM32AQ9Y421 112 aaKnown RBP1.62□□□□□ -2.15
CPNE3-204ENST00000517862 IGHV3-73A0A0B4J1V6 119 aa1.61□□□□□ -2.15
CPNE3-204ENST00000517862 MUC21A0A0G2JKD1 596 aa1.61□□□□□ -2.15
CPNE3-204ENST00000517862 A0A1B0GU33 70 aa1.61□□□□□ -2.15
CPNE3-204ENST00000517862 TMEM238C9JI98 176 aa1.61□□□□□ -2.15
CPNE3-204ENST00000517862 GYPBP06028 91 aa1.61□□□□□ -2.15
CPNE3-204ENST00000517862 NPPCP23582 126 aa1.61□□□□□ -2.15
CPNE3-204ENST00000517862 ATP6V0CP27449 155 aa1.61□□□□□ -2.15
CPNE3-204ENST00000517862 PSME3P61289 254 aa1.61□□□□□ -2.15
CPNE3-204ENST00000517862 FLI1Q01543 452 aaPredicted RBP1.61□□□□□ -2.15
CPNE3-204ENST00000517862 PYDC2Q56P42 97 aa1.61□□□□□ -2.15
CPNE3-204ENST00000517862 LINC01556Q5JQF7 62 aa1.61□□□□□ -2.15
CPNE3-204ENST00000517862 GLT8D1Q68CQ7 371 aa1.61□□□□□ -2.15
CPNE3-204ENST00000517862 AMMECR1LQ6DCA0 310 aa1.61□□□□□ -2.15
CPNE3-204ENST00000517862 RPS27LQ71UM5 84 aaKnown RBP1.61□□□□□ -2.15
CPNE3-204ENST00000517862 H1FOOQ8IZA3 346 aaPredicted RBP1.61□□□□□ -2.15
CPNE3-204ENST00000517862 OR10P1Q8NGE3 313 aa1.61□□□□□ -2.15
CPNE3-204ENST00000517862 ENY2Q9NPA8 101 aa1.61□□□□□ -2.15
CPNE3-204ENST00000517862 GID8Q9NWU2 228 aa1.61□□□□□ -2.15
CPNE3-204ENST00000517862 PCTPQ9UKL6 214 aa1.61□□□□□ -2.15
CPNE3-204ENST00000517862 PRELID1Q9Y255 219 aa1.61□□□□□ -2.15
CPNE3-204ENST00000517862 TRAV2A0A0B4J234 112 aa1.6□□□□□ -2.15
CPNE3-204ENST00000517862 A0A1B0GV50 99 aa1.6□□□□□ -2.15
CPNE3-204ENST00000517862 LOC107986453A0A1B0GWG9 222 aa1.6□□□□□ -2.15
CPNE3-204ENST00000517862 SLC17A3O00476 420 aa1.6□□□□□ -2.15
CPNE3-204ENST00000517862 CPSF4O95639 269 aaKnown RBP1.6□□□□□ -2.15
CPNE3-204ENST00000517862 IGHV3-30P01768 117 aa1.6□□□□□ -2.15
CPNE3-204ENST00000517862 IGHV3-33P01772 117 aa1.6□□□□□ -2.15
CPNE3-204ENST00000517862 IGHV3-30-5P0DP03 117 aa1.6□□□□□ -2.15
CPNE3-204ENST00000517862 CRHBPP24387 322 aa1.6□□□□□ -2.15
CPNE3-204ENST00000517862 PHBP35232 272 aa1.6□□□□□ -2.15
CPNE3-204ENST00000517862 LPAR6P43657 344 aa1.6□□□□□ -2.15
CPNE3-204ENST00000517862 ZNF137PP52743 207 aa1.6□□□□□ -2.15
CPNE3-204ENST00000517862 DHFR2Q86XF0 187 aa1.6□□□□□ -2.15
CPNE3-204ENST00000517862 STX12Q86Y82 276 aa1.6□□□□□ -2.15
CPNE3-204ENST00000517862 PXT1Q8NFP0 134 aa1.6□□□□□ -2.15
CPNE3-204ENST00000517862 OR5A2Q8NGI9 324 aa1.6□□□□□ -2.15
CPNE3-204ENST00000517862 OR5C1Q8NGR4 320 aa1.6□□□□□ -2.15
CPNE3-204ENST00000517862 OR13C8Q8NGS7 320 aa1.6□□□□□ -2.15
CPNE3-204ENST00000517862 OR4X1Q8NH49 305 aa1.6□□□□□ -2.15
CPNE3-204ENST00000517862 HOPXQ9BPY8 73 aaPredicted RBP1.6□□□□□ -2.15
CPNE3-204ENST00000517862 CMSS1Q9BQ75 279 aaKnown RBP1.6□□□□□ -2.15
CPNE3-204ENST00000517862 TMEM147Q9BVK8 224 aa1.6□□□□□ -2.15
CPNE3-204ENST00000517862 CACYBPQ9HB71 228 aaKnown RBP1.6□□□□□ -2.15
CPNE3-204ENST00000517862 TRBV20OR9-2A0A075B6H5 130 aa1.59□□□□□ -2.15
CPNE3-204ENST00000517862 A0A087WUU8 490 aa1.59□□□□□ -2.15
CPNE3-204ENST00000517862 A0A1W2PNN7 141 aa1.59□□□□□ -2.15
CPNE3-204ENST00000517862 DHRS12A0PJE2 317 aa1.59□□□□□ -2.15
CPNE3-204ENST00000517862 PQLC2LA1A4F0 135 aa1.59□□□□□ -2.15
CPNE3-204ENST00000517862 HMGN4O00479 90 aa1.59□□□□□ -2.15
CPNE3-204ENST00000517862 SDCBPO00560 298 aaPredicted RBP1.59□□□□□ -2.15
CPNE3-204ENST00000517862 PDE6DO43924 150 aa1.59□□□□□ -2.15
CPNE3-204ENST00000517862 OR7C1O76099 320 aaPredicted RBP1.59□□□□□ -2.15
CPNE3-204ENST00000517862 CRYZL1O95825 349 aa1.59□□□□□ -2.15
CPNE3-204ENST00000517862 TAS2R41P59536 307 aa1.59□□□□□ -2.15
CPNE3-204ENST00000517862 CDC42P60953 191 aa1.59□□□□□ -2.15
CPNE3-204ENST00000517862 NCALDP61601 193 aa1.59□□□□□ -2.15
CPNE3-204ENST00000517862 SPINK9Q5DT21 86 aa1.59□□□□□ -2.15
CPNE3-204ENST00000517862 PSMG4Q5JS54 123 aa1.59□□□□□ -2.15
CPNE3-204ENST00000517862 PRR9Q5T870 116 aa1.59□□□□□ -2.15
CPNE3-204ENST00000517862 TMEM42Q69YG0 159 aa1.59□□□□□ -2.15
CPNE3-204ENST00000517862 IGFL1Q6UW32 110 aa1.59□□□□□ -2.15
CPNE3-204ENST00000517862 C2orf91Q6ZV80 131 aa1.59□□□□□ -2.15
CPNE3-204ENST00000517862 OR51A2Q8NGJ7 313 aa1.59□□□□□ -2.15
CPNE3-204ENST00000517862 DEDD2Q8WXF8 326 aa1.59□□□□□ -2.15
CPNE3-204ENST00000517862 SMDT1Q9H4I9 107 aa1.59□□□□□ -2.15
CPNE3-204ENST00000517862 NOP10Q9NPE3 64 aaKnown RBP1.59□□□□□ -2.15
CPNE3-204ENST00000517862 TIMM8BQ9Y5J9 83 aaPredicted RBP1.59□□□□□ -2.15
CPNE3-204ENST00000517862 MEIKINA0A087WXM9 373 aa1.58□□□□□ -2.16
CPNE3-204ENST00000517862 TRBV7-1A0A0A6YYK4 115 aa1.58□□□□□ -2.16
CPNE3-204ENST00000517862 FAM159BA6NKW6 160 aa1.58□□□□□ -2.16
CPNE3-204ENST00000517862 SYNGR2O43760 224 aa1.58□□□□□ -2.16
CPNE3-204ENST00000517862 FABP1P07148 127 aa1.58□□□□□ -2.16
CPNE3-204ENST00000517862 S100A7P31151 101 aa1.58□□□□□ -2.16
CPNE3-204ENST00000517862 TAS2R30P59541 319 aa1.58□□□□□ -2.16
CPNE3-204ENST00000517862 B2MP61769 119 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms