RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 FAM53AQ6NSI3 398 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P19-201ENST00000517578 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
HMGB1P19-201ENST00000517578 KLHL30-AS1Q8NEE0 82 aa3.58□□□□□ -1.84
HMGB1P19-201ENST00000517578 EEF1AKMT3Q96AZ1 226 aa3.58□□□□□ -1.84
HMGB1P19-201ENST00000517578 TM2D3Q9BRN9 247 aa3.58□□□□□ -1.84
HMGB1P19-201ENST00000517578 NDUFA4L2Q9NRX3 87 aa3.58□□□□□ -1.84
HMGB1P19-201ENST00000517578 FAM223BA6NKX1 122 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 JMJD7-PLA2G4BH0Y9G9 81 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 H0YGX0 51 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 NTN3O00634 580 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 IGHV1-69P01742 117 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 HOXD3P31249 432 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 CRIP1P50238 77 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 UBE2BP63146 152 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 ADORA2A-AS1P86434 159 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 MIAQ16674 131 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 Q1T7F1 81 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 ESRGQ1W209 222 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 MORN5Q5VZ52 161 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 GFRALQ6UXV0 394 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 NRACQ8N912 160 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 C9orf106Q8NAJ2 232 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 LY6G5BQ8NDX9 201 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 UBL5Q9BZL1 73 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 DEC1Q9P2X7 70 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 VCYO14598 125 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 EFNA2O43921 213 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 IGF1P05019 195 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 RFPL3SP0C7P2 107 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 FKBP1BP68106 108 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 NSUN5P1Q3KNT7 163 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 ZNF876PQ49A33 203 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 SPANXN1Q5VSR9 72 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 PVRIGQ6DKI7 326 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 IGFL2Q6UWQ7 119 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 FAM223AQ8IWN6 122 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 TMEM61Q8N0U2 210 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 ZNF491Q8N8L2 437 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 Q8N9P0 234 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 MRPL53Q96EL3 112 aaKnown RBP3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 C17orf77Q96MU5 243 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 IGKV1D-37A0A075B6S9 117 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 IGHV3OR16-10A0A075B7F0 116 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 IGIPA6NJ69 53 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 H3BQ85 93 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 CCL21O00585 134 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 CD59P13987 128 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 Q0VFX4 171 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 LYPD5Q6UWN5 251 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 VMO1Q7Z5L0 202 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 WDR86Q86TI4 376 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 TMEM167AQ8TBQ9 72 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 KLF14Q8TD94 323 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 CLEC2BQ92478 149 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 AMELXQ99217 191 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 CYSTM1Q9H1C7 97 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 CXXC4Q9H2H0 198 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 USF3Q68DE3 2245 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 ABCA7Q8IZY2 2146 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 UNC13CQ8NB66 2214 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 CABIN1Q9Y6J0 2220 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 CACNA1DQ01668 2161 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 IGLV4-69A0A075B6H9 119 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 IGKV3D-7A0A0C4DH55 119 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 F6UB75 175 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 F8WEM9 126 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 MIFP14174 115 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 APOC4P55056 127 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 PHF5AQ7RTV0 110 aaKnown RBP3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 OBSCN-AS1Q96MR7 158 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 RBM12B-AS1Q9P1G2 102 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 LENEPQ9Y5L5 61 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 MUC22E2RYF6 1773 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 IGHV4OR15-8A0A075B7B6 117 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 A0A087WW49 117 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 DEFB108AA8MXU0 73 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 H3BRN7 92 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 M0R1W7 72 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 SPRY2O43597 315 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 MRPL33O75394 65 aaKnown RBP3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 CD28P10747 220 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 PDE6GP18545 87 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 LYZP61626 148 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 CXCL6P80162 114 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 ECSCRQ19T08 205 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 Q6ZVQ6 151 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 RNASE6Q93091 150 aaKnown RBP3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 UBE2E2Q96LR5 201 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 CCL13Q99616 98 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 FGF23Q9GZV9 251 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 PROK2Q9HC23 129 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 ESM1Q9NQ30 184 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 MRPL36Q9P0J6 103 aaKnown RBP3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 PHLDA3Q9Y5J5 127 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 ESPL1Q14674 2120 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 DOCK7Q96N67 2140 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 NACAE9PAV3 2078 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 TET2Q6N021 2002 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 IGHV1OR15-9A0A0B4J2B8 117 aa3.52□□□□□ -1.85
HMGB1P19-201ENST00000517578 SAA1P0DJI8 122 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms