RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 CMYA5Q8N3K9 4069 aa5.54□□□□□ -1.52
SCARNA20.1-201ENST00000516009 NACAE9PAV3 2078 aa5.53□□□□□ -1.52
SCARNA20.1-201ENST00000516009 A0A087WWL8 130 aa5.53□□□□□ -1.52
SCARNA20.1-201ENST00000516009 LOC389332A0A1B0GUA5 103 aa5.53□□□□□ -1.52
SCARNA20.1-201ENST00000516009 A8MWV9 139 aa5.53□□□□□ -1.52
SCARNA20.1-201ENST00000516009 TNFRSF6BO95407 300 aa5.53□□□□□ -1.52
SCARNA20.1-201ENST00000516009 GATA1P15976 413 aaPredicted RBP5.53□□□□□ -1.52
SCARNA20.1-201ENST00000516009 EGFEM1PQ0D2K5 195 aa5.53□□□□□ -1.52
SCARNA20.1-201ENST00000516009 RRN3P1Q2M238 152 aa5.53□□□□□ -1.52
SCARNA20.1-201ENST00000516009 FAM74A4Q5TZK3 123 aa5.53□□□□□ -1.52
SCARNA20.1-201ENST00000516009 ZNF705AQ6ZN79 300 aaPredicted RBP5.53□□□□□ -1.52
SCARNA20.1-201ENST00000516009 POM121L12Q8N7R1 296 aa5.53□□□□□ -1.52
SCARNA20.1-201ENST00000516009 PRSS3P2Q8NHM4 247 aa5.53□□□□□ -1.52
SCARNA20.1-201ENST00000516009 RNASE8Q8TDE3 154 aaKnown RBP5.53□□□□□ -1.52
SCARNA20.1-201ENST00000516009 CHCHD1Q96BP2 118 aaKnown RBP5.53□□□□□ -1.52
SCARNA20.1-201ENST00000516009 C16orf74Q96GX8 76 aa5.53□□□□□ -1.52
SCARNA20.1-201ENST00000516009 PACRGQ96M98 296 aaPredicted RBP5.53□□□□□ -1.52
SCARNA20.1-201ENST00000516009 JPT2Q9H910 190 aa5.53□□□□□ -1.52
SCARNA20.1-201ENST00000516009 TRAV26-2A0A0B4J265 109 aa5.52□□□□□ -1.53
SCARNA20.1-201ENST00000516009 F5H697 171 aa5.52□□□□□ -1.53
SCARNA20.1-201ENST00000516009 GAS8-AS1O95177 125 aa5.52□□□□□ -1.53
SCARNA20.1-201ENST00000516009 PPP1R17O96001 155 aa5.52□□□□□ -1.53
SCARNA20.1-201ENST00000516009 LINC00614P0C842 121 aa5.52□□□□□ -1.53
SCARNA20.1-201ENST00000516009 PMCHP20382 165 aa5.52□□□□□ -1.53
SCARNA20.1-201ENST00000516009 AMTP48728 403 aa5.52□□□□□ -1.53
SCARNA20.1-201ENST00000516009 LINC00315P59091 139 aa5.52□□□□□ -1.53
SCARNA20.1-201ENST00000516009 KRTAP10-11P60412 298 aa5.52□□□□□ -1.53
SCARNA20.1-201ENST00000516009 ZNF56Q15929 161 aa5.52□□□□□ -1.53
SCARNA20.1-201ENST00000516009 FA2HQ7L5A8 372 aa5.52□□□□□ -1.53
SCARNA20.1-201ENST00000516009 NRACQ8N912 160 aa5.52□□□□□ -1.53
SCARNA20.1-201ENST00000516009 OR10D4PQ8NGN7 298 aa5.52□□□□□ -1.53
SCARNA20.1-201ENST00000516009 IL17DQ8TAD2 202 aa5.52□□□□□ -1.53
SCARNA20.1-201ENST00000516009 URB1-AS1Q96HZ7 61 aa5.52□□□□□ -1.53
SCARNA20.1-201ENST00000516009 NDUFAF3Q9BU61 184 aa5.52□□□□□ -1.53
SCARNA20.1-201ENST00000516009 PKD1L1Q8TDX9 2849 aa5.52□□□□□ -1.53
SCARNA20.1-201ENST00000516009 TRGV1A0A0A0MS02 117 aa5.51□□□□□ -1.53
SCARNA20.1-201ENST00000516009 RHODO00212 210 aa5.51□□□□□ -1.53
SCARNA20.1-201ENST00000516009 CRYGDP07320 174 aa5.51□□□□□ -1.53
SCARNA20.1-201ENST00000516009 IGHV4-30-4P0DP06 118 aa5.51□□□□□ -1.53
SCARNA20.1-201ENST00000516009 IFI27P40305 119 aaPredicted RBP5.51□□□□□ -1.53
SCARNA20.1-201ENST00000516009 DAZ2Q13117 558 aaKnown RBP5.51□□□□□ -1.53
SCARNA20.1-201ENST00000516009 LGALS9BQ3B8N2 356 aa5.51□□□□□ -1.53
SCARNA20.1-201ENST00000516009 SUMO4Q6EEV6 95 aa5.51□□□□□ -1.53
SCARNA20.1-201ENST00000516009 FAM19A2Q8N3H0 131 aa5.51□□□□□ -1.53
SCARNA20.1-201ENST00000516009 RASL10AQ92737 203 aa5.51□□□□□ -1.53
SCARNA20.1-201ENST00000516009 MDFIQ99750 246 aa5.51□□□□□ -1.53
SCARNA20.1-201ENST00000516009 NXT2Q9NPJ8 142 aaKnown RBP5.51□□□□□ -1.53
SCARNA20.1-201ENST00000516009 AP5S1Q9NUS5 200 aa5.51□□□□□ -1.53
SCARNA20.1-201ENST00000516009 MRPL16Q9NX20 251 aaKnown RBP5.51□□□□□ -1.53
SCARNA20.1-201ENST00000516009 ANK2Q01484 3957 aa5.51□□□□□ -1.53
SCARNA20.1-201ENST00000516009 SMIM9A6NGZ8 99 aa5.5□□□□□ -1.53
SCARNA20.1-201ENST00000516009 G3V4G9 280 aa5.5□□□□□ -1.53
SCARNA20.1-201ENST00000516009 H7C1H1 209 aa5.5□□□□□ -1.53
SCARNA20.1-201ENST00000516009 RS1O15537 224 aa5.5□□□□□ -1.53
SCARNA20.1-201ENST00000516009 DEFB135Q30KP9 77 aa5.5□□□□□ -1.53
SCARNA20.1-201ENST00000516009 SAMD5Q5TGI4 173 aa5.5□□□□□ -1.53
SCARNA20.1-201ENST00000516009 CFAP126Q5VTH2 177 aa5.5□□□□□ -1.53
SCARNA20.1-201ENST00000516009 Q8N8P6 123 aa5.5□□□□□ -1.53
SCARNA20.1-201ENST00000516009 RPL39LQ96EH5 51 aaKnown RBP5.5□□□□□ -1.53
SCARNA20.1-201ENST00000516009 C20orf78Q9BR46 151 aa5.5□□□□□ -1.53
SCARNA20.1-201ENST00000516009 OVOL2Q9BRP0 275 aa5.5□□□□□ -1.53
SCARNA20.1-201ENST00000516009 NOP10Q9NPE3 64 aaKnown RBP5.5□□□□□ -1.53
SCARNA20.1-201ENST00000516009 IGHV1-24A0A0C4DH33 117 aa5.49□□□□□ -1.53
SCARNA20.1-201ENST00000516009 PLAC8L1A1L4L8 177 aa5.49□□□□□ -1.53
SCARNA20.1-201ENST00000516009 PRSS47A8MTI9 375 aa5.49□□□□□ -1.53
SCARNA20.1-201ENST00000516009 A8MZ25 164 aa5.49□□□□□ -1.53
SCARNA20.1-201ENST00000516009 M0QY20 66 aa5.49□□□□□ -1.53
SCARNA20.1-201ENST00000516009 SUMO2P61956 95 aaKnown RBP5.49□□□□□ -1.53
SCARNA20.1-201ENST00000516009 Q6ZTI0 123 aa5.49□□□□□ -1.53
SCARNA20.1-201ENST00000516009 Q6ZWC4 215 aa5.49□□□□□ -1.53
SCARNA20.1-201ENST00000516009 OR4C5Q8NGB2 326 aa5.49□□□□□ -1.53
SCARNA20.1-201ENST00000516009 SMIM2Q9BVW6 85 aa5.49□□□□□ -1.53
SCARNA20.1-201ENST00000516009 ST20Q9HBF5 79 aa5.49□□□□□ -1.53
SCARNA20.1-201ENST00000516009 X6R8D5 127 aa5.49□□□□□ -1.53
SCARNA20.1-201ENST00000516009 IGLV2-18A0A075B6J9 118 aa5.48□□□□□ -1.53
SCARNA20.1-201ENST00000516009 IGHV3-73A0A0B4J1V6 119 aa5.48□□□□□ -1.53
SCARNA20.1-201ENST00000516009 TRAV4A0A0B4J268 109 aa5.48□□□□□ -1.53
SCARNA20.1-201ENST00000516009 TRBV6-5A0A0K0K1A5 114 aa5.48□□□□□ -1.53
SCARNA20.1-201ENST00000516009 GAGE12BA1L429 117 aa5.48□□□□□ -1.53
SCARNA20.1-201ENST00000516009 LINC01546A6NGU7 62 aa5.48□□□□□ -1.53
SCARNA20.1-201ENST00000516009 GAGE7O76087 117 aa5.48□□□□□ -1.53
SCARNA20.1-201ENST00000516009 LEPROTL1O95214 131 aa5.48□□□□□ -1.53
SCARNA20.1-201ENST00000516009 GAGE12FP0CL80 117 aa5.48□□□□□ -1.53
SCARNA20.1-201ENST00000516009 GAGE12GP0CL81 117 aa5.48□□□□□ -1.53
SCARNA20.1-201ENST00000516009 GAGE12IP0CL82 117 aa5.48□□□□□ -1.53
SCARNA20.1-201ENST00000516009 SMIM6P0DI80 62 aa5.48□□□□□ -1.53
SCARNA20.1-201ENST00000516009 EMP1P54849 157 aa5.48□□□□□ -1.53
SCARNA20.1-201ENST00000516009 PMCHL1Q16048 86 aa5.48□□□□□ -1.53
SCARNA20.1-201ENST00000516009 UFSP1Q6NVU6 142 aa5.48□□□□□ -1.53
SCARNA20.1-201ENST00000516009 ZFP2Q6ZN57 461 aa5.48□□□□□ -1.53
SCARNA20.1-201ENST00000516009 OR11H2Q8NH07 326 aa5.48□□□□□ -1.53
SCARNA20.1-201ENST00000516009 EDA2RQ9HAV5 297 aa5.48□□□□□ -1.53
SCARNA20.1-201ENST00000516009 NIT2Q9NQR4 276 aa5.48□□□□□ -1.53
SCARNA20.1-201ENST00000516009 TRGV2A0A075B6R0 118 aa5.47□□□□□ -1.53
SCARNA20.1-201ENST00000516009 K7EMI3 77 aa5.47□□□□□ -1.53
SCARNA20.1-201ENST00000516009 IGHV3-53P01767 116 aa5.47□□□□□ -1.53
SCARNA20.1-201ENST00000516009 HBDP02042 147 aa5.47□□□□□ -1.53
SCARNA20.1-201ENST00000516009 KRTDAPP60985 99 aa5.47□□□□□ -1.53
SCARNA20.1-201ENST00000516009 RPL32P62910 135 aaKnown RBP5.47□□□□□ -1.53
SCARNA20.1-201ENST00000516009 LAGE3Q14657 143 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms